bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM3.fa
blob7edf0592ea0955e76d57830601e319823cfe5580
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YDL205C HEM3 "Phorphobilinogen deaminase, catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p"
52 AGTACGTGTGTATTTACCAACTACAAATTTATCTAGATTTTCTTCGCTTTTCTTTTTTTC
53 TATTGTTCTAGATATTAATACGGGATGAGAAGAACAGAATATTCAAAATCTAATACAGCC
54 CTGTACCATGCAAACACGAGCGTCAATCTGCCAATGACCTTGAATTCAGGCTATGTGTAG
55 CAATAATACAGATAGTTAGTAGCCTCGTTTATATAAAGCGTTCCTTTACTTTTTCATTTT
56 CTTTCTTTTTTTATGTTTGATTTTTTTACTTTTTCACTTTAAAAAATTGCTGAAATTTTC
57 GTAGCCAAAAAAAAGACCTTCATTGCTTACTCATCGGTTTCTTATTGGTCAGACGCTCCC
58 CAGGGTCAATTGACAAGGAGAGAAGGAATGTTATATGGGAATTGCTGCGTAAAGATGGTC
59 AAAAATCCTGGACTGCCGTACGAACGACAATGTAAGGATGACTGCATTAGCCAGAAAGAC
60 ATCTTTACCCCCGGTGCTGCCAGGGAGCAAAATAATTACGAAAAGTGGACGCAAAGTTAA
61 CTTAAACTACAAGGGTAGCAGCAGAATGTGTCGGTGGTACCGGTGTGATAATGCCCCATT
62 TGAGATGCTTGTAATTGTGGCCTAGCAATAAGAACGCAAGGCGTTTTTGTTGAAAGGAGA
63 ACAAGGTTAGACGGTGACGTTTAGGCGCATAGGCAATCTCCCCTTATTGTTCACCCTTAT
64 TTCCACCCTCAAACGATAAAGCTTGCTACTTTGATGAAAAAAATATATAAAAGGGATTGA
65 AAAGCAGATCAATTATGTAGCAATAGTAGTAATAACTTGTTCAATTGCTTGTCTCAACTT
66 GCCACAAACTATCATCAACA
67 >MIT_Spar_c429_3020 YDL205C 5' untranslated region, Contig c429 77420 - 79419(revcom), 2000 bp (revcom)
68 AGTACGTGTGTATTTATCAACTACAAAATTTATCTAGATTTTCTTGCCTTTTCCTTTTTC
69 TATTGTTCTAGATACTAATACGGGATGAGAAGAACAGAATATTCAAAATGTAAAACAGCC
70 CTGTACCATGCAAACACGAGCCTCAATCTGCCAATGACCTTGAATCCAAGCTATGTGTAG
71 CAATAATACAGATGATTGATTGGCGTCGTTTATATAAAGCGTTCCTTCATTTTTTTCATT
72 TTCTTTCTTTTTTTATGTTTGATTTTTTACTTTTTCACTTTTGAAAACTGCTGAAATTTT
73 CGTAGCAAAAAAAAAAAGACCTTCATTGCTTACTCATCGGTTTCTTATTGGTCAGACGCT
74 CCCCAGGGTCAATTGACAAGGAGAGAAGGAATGTTACATCCAGGAATTGCGACATAAAGA
75 TGTCCAAGAAGTCTGAACTGTCATACGAATGGCTATGCAAGGAGGATAGTACTGGTCAAG
76 AAGACATCTTACCCCCGGTGCTGTCAGGGAGCAAAAAAATGACAAAAGTGGACGCAAAGT
77 TAACTTGAACTACAAGGGTAGCAACAGAATGTCGGTGGTACCGGATGTGACAAAGCTCAC
78 TTGAGGTGCTTCTTGTTGCGGCATAGCAATAAGAGCGCAAGGCGTTTTTATGGAAAGGAG
79 AGCGAGGTTAGAGGGTGACGTTTAGGCGCATAGGCAACCTCCCCTTATTGTTCACCCTTA
80 TTTCCACCCTCAAACGATAAAGCTTGTCTACATTGATGAAAAAAATGTATAAAAGGGATT
81 GAAAAGCCGATCATGTGTGTAGCAATAGTAGTAGTTATACTTGTTCAATTGCTTGCTTGC
82 ACTTTTCCAAAAACTACCAC
83 >MIT_Smik_c193_2483 YDL205C 5' untranslated region, Contig c193 6380 - 8379(revcom), 2000 bp (revcom)
84 AGTACGTGTGTATTTACCAACTATAAAATTTTACCTAGACTATCTGGCCTTTTTCTTTTT
85 TCTATTGTTCTAGATACTAATACGGGATGAAAAGAACAGAATATTCAAAAAGTAATACAG
86 CCCTGTACCATTCAAACACGAGCGCCAATTTGCCAATGAACTTGAAATCCAGCTATGCGT
87 AGCGATAATACAGATGATTGTTTGATGTCGTTTATATTAAGCGTTCCTTCAGTTTTTCTC
88 ATTTTCTTTCTTTTTCTATGTTTTATTTTTCACTTTTTCACTTTTGAAAATTGCTGAAAT
89 TTTCGTAACAAAAAAAGAGGCCTTCATTGCTTACTCATCGTTATCTTATTGGTTAAAATC
90 CCCAGCGACAATGTACAAGGAGAGAAGAAATGATATGTCTGGGAATTGCAGTTTGAAGAT
91 ATCCAAAGAGTTTTGAAGTGCCATACGAGCAACCACGTGAGAAGTAGAGCCTTAACAGAA
92 AATTCATCTTACCCCTAGTACTGCCAGGGAGGAACTAAACCTAAGAACTAGTGTTAACTT
93 GACTTGAACTGCAAGGGTAGCGACGGCGTATGTCGGTGGTACCGGATATGGCAAGAGCCC
94 ATTTGAGCTGCTTGTTCTTGTGACATACTATTAAGAGCGCAAGGCGTTTATGGAAAGGAG
95 GACAAGGTCAGAGGATGACGTTTAAGCGCATAGGCAATCTCCCCTTATTATTCACCCTTA
96 TTTCCACCCTCAAACGATAAAGCTTGCTGCGCTGTTGAAAAGTATATAAAAGGGATAGAA
97 AAGCAGAGCAATTATAATTTAGTAGAATAGCTTATTCTATCGTTAACTTGTTGAAAGGAT
98 CAGATTATTATCAAGATGAA
99 >MIT_Sbay_c841_3215 YDL205C 5' untranslated region, Contig c841 7323 - 9322(revcom), 2000 bp (revcom)
100 AGTATGTGTATATTTACCAACTATAGAGTATATCTAGTATTTTTTTTCCTTCTTCTTTTT
101 CTATTGTTCTAGATGCTAATATGGGATGAGTAGAACAAAATATTCAAAACGCAATACAGC
102 CCTGTACCATTCAAATACGAACGCCAATCTGCCAATGACCTTGAAATCAAGTTATGTGCC
103 GCGATAATACAATCTTTTGGCCTATATCGTTTAAATAAGCGTTCCTTTAATTTTTCGGTT
104 TCTTTCTTTTTTATGTCTAATTTTTCATTTTTTTTCACTTGAAAATTGCTGAAATTTTCG
105 TAGCTGAAAAAGAGAGGCCTTCTTTGCTTACTCATCGTTATCTTATTGGTCAAGAGCCCA
106 AGGGACAATAGACAAGGAGAGAACCACCAACTTTGGGAGTTGGATGCAAAGAAGGTCTTT
107 GATTTTGGGCTGCTATCAGAGCGGGCCATATAAGGAAGCTTGTAGTGGTTAGGAGAGAAC
108 ACGTCATTACCCCCCTCCCCCTTCTCCGCGCTGCCAGGGACCAGGCAAGGGCTTGCAAGA
109 GATGAACGTAAGATAGAACTACGAGGGTCGCGGCCAATGTGTCGGTAGTACCGGATGGGG
110 CAAAGCCCAATTGAGGTGCTTGTTGTTGAGGATGGTCGGCATGGCATGGCATGGGAGGCC
111 AAAGGCGCTTTGTGGGAAGGAGAACAAACAACATTAGAGGGTGACGTTTTAGCGCATAGG
112 CAATCTCCCCTTATTGTTCACCCTTATTTCCACCCTCAAACGACAAGGCTTGTTATGTTG
113 GTTGGAAATATATAAAAGGGATTGAAAAAGATCATATTCCTACATAAATTATGGTATTAG
114 TTTTTCTTCAATTGCTGGCT
115 >WashU_Skud_Contig1850.5 YDL205C 5' untranslated region, Contig c1850 6875 - 8874(revcom), 2000 bp (revcom)
116 GATACGTGTGTATTTGCTAACTATAAAATTTATCTAGTTTTCCTGCTTTTTTTTTTTTCT
117 ATTGTTCTAGAAACTAATATGGGGATGAGAAGAACAAAATTTTCAAAAAGCAATACAGCC
118 CTGTACCATTCAAACACGAACGCCAATCTGCAATGACCTTGAAATCAATCTATGTGTCGC
119 GATAATACAAGTGATTGATTGGTGTCGTTTATATAAAGCGTTCCTTCAATTTTTTCATTT
120 TCTTTCTTTTTTTATGTTTAATTTTCTACCTTTTTCACTTTTGAAAATTGCTGAAATTTT
121 CGTAGCAAAAAAAGAGAGGCGTACGTTGCTTACTCATCGTTTTCTTATTGGTCAAAAGCT
122 CCAGGAACAATGCCCAAGGAGAGAAAGAGTGCTACGTCTAGGAATTGCGATGGAAAGGCG
123 TCCAAGAGTCCTAAACTACCATGAGAACGGGCCACCCAAGGAGGGATAGCAATTGCTGAA
124 ACAACATCTTCACCTTCGGAGCTGGCAGGGAGCAAGGGACTCTCCGGAAAGAAAGTGAAC
125 GCAAAACGGAACTACAAGGATAGCAACGGAATGTGTCGGTGGTAGCGGATGTGGCAAGAT
126 CCCATTTCAGGAGCTTGTTGTTACGGCACAGCAGCAAGAAGAGCACAAGGCTTTTTCCGT
127 AAAGGAGAACAAAGTTGGAAGGTGACGTTTAGGCGCATAGGCAATCTCCCCTTATTGTTC
128 ACCCTTATTTCCACCCTCAAAGGATAAAGCTTGTTGCATTGATAAAAAATGTATAAAAAG
129 GATGGGAAACAGATGATAGTTAACAAGGTAGTGGGACGGTCTTTCGCTTATTCAGTTGTG
130 TGACATTCAAGGGTTACAAT