bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM4-HEM12.fa
bloba3d40d24bb4351c0dda91a29a2d0a43d1f5e814e
1 >SGD_Scer_YOR278W HEM4 "Uroporphyrinogen III synthase, catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in the heme biosynthetic pathway"
2 CTCTCGAGCAAGGTCTATTTTACCTTTCTGTTTCCTTATCCTTTGACACTAAAATTCAAA
3 AAACTCACTAGAAAGTTCACTAAAGCGCCTTAGCTGACTACAGCACAACCCAACCCCAAA
4 AACTAGTGAACTACACACTAAGAGAATTTATGGTATTTCCATAATTGAAGTATATGTACG
5 ATGTATACAATGTAAACAAGAGAGTAATGAAGTGAAGATATGTACACCTAGAGCGAACCA
6 ATGATAATTTGTTTTCTTAATTAAGAAAAACCATTAAAACTGGATTAGATTTCAATAATG
7 AAAAGCTAGGAACAAAAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGACATA
8 TGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGTTTT
9 CTTATCCTGAAGGATCCTGCAAATGAAGTAAGTTCAAAGAATTGAAATGAAATCGCCTTT
10 TATACCCTCGCCGCACCAAGGAGCGCGCTGTGAAAATTTTTCGCTTTATCTCTTAGGGCT
11 CCTACTGTCGGTAGAGAAAAGTTGAGTATATTTAAAGCATGAGGTAACTTTTCTGCCCAT
12 TTTTACTTCTATTTCCATTTGAATTCAGAAAAGTG
13 >MIT_Spar_c261_21317 YOR278W 5' untranslated region, Contig c261 32269 - 34268, 2000 bp (revcom)
14 CGTTCCAAGCAGGGTTTATTCTATTTCTCGGCTCCTTTACCCTGTAACTTCGAGATTCAA
15 AAACTCGCTATAACTTCACTAAAGCGCTTTAGTTGACTACAACACAACCCAACCCCAAAA
16 TAAACTGTCCAACTACACAATACCGAGGATAATCCACGATATTTCGGTGATTGAAGTATA
17 TGTATTACGTATGCAATGTAAGCAAGAAACTAACAAAATGAATATGTACACCTAGAGCGA
18 ACCAATGATAATTTGTTTTCTTAATAAAGAAAAACTATTAAAACTGGATTAGATTTCAAT
19 AATGAAAAGCTAGGAACAGAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGAC
20 ATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGT
21 TCTTTTATCCTGAAGGATAAACGGAAAGCTCCCGATTAAAAACAAGTATAGAGTACTGGA
22 ATAGAATCGCCTTTTATACCCTCCCTCGCCGCATCAAGAAGCGCGCTGTGAAAATTTTTC
23 GTTTTTCTCTTAGGGCTCCCATCCAACTGTCGGCGAGGAAAAGTTGTATATATTTAAAGC
24 ATGAGGTAACTTTGTTGCCCATTATCTTTTTTGTT
25 >MIT_Smik_c492_20940 YOR278W 5' untranslated region, Contig c492 3260 - 5259(revcom), 2000 bp (revcom)
26 ACTTTCAAACACACTCTGGTGTACTCCTCGGTCCCTTCATCTCATTTCTTCAAGATGCAG
27 AACTTCGCCGGAAGTAAACTAAAGTGCTTTAATTAATCAAAAGACAACTTAATTCCCAAA
28 CGGAAATGCAGGCTAGACAAACCGAAGATAATCCCCGATATTTCTGAGTTTAACAAATGT
29 ATGTATAATATGTATGCAATGTAGGCAAGAAAATAACGAAGTGAAGATATGTACACCTAG
30 AGCGAACCAATAATAATTTGTTTTCTTACTAAAGAAAAACTATTAAAACTGGATTAGATT
31 TCAATAATGAAAAGCTAGGAACAAAAGAAATTTGTCTACTTCCAGCCATTTGCGCTTTAT
32 ATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAAT
33 GATGGTTCTTTTAAACCAAAATTTAAAGAAAAATCTTAACGGTAATATGAGTAGGAGGTT
34 GGAATGGGATCGCTTTTTATACCCTCATTGTGATAAGAGACGCGCAGTGAAAAATTTTCG
35 CTTTTTCTTAGGGCTCCTATCTAACTCTCGGGCGAATAAATATCATGAATGTATTTAAAC
36 GTCAAGTTAGTTAAATGTTTGAGTCTGTTTCTTTT
37 >WashU_Skud_Contig1682.4 YOR278W 5' untranslated region, Contig c1682 3379 - 5378, 2000 bp (revcom)
38 CTCTTCAAACAGACTCCAATTCACTACTGAGCTCTTACCTTGTGACTTCAAGACTCACTA
39 CTCAGTTGAAAGACACGCTCAGTACCAAATTCGGCTGCGAGGCAACTAACGCCTTTAAAC
40 AGGTAGGTAAGGAACAATACCGAAAGGCCATCTCCGATGTTTCGAAGATTGGCAAATGTA
41 TATATTATGTATGCAATATAGGCAAGATGATAACGAAGTAGAGATATGTACACCTAGAGC
42 GAACCAATGATAATTTGTTTTCTTAATGAAGAAAGTATTAAAACTGGATTAGATTTCAAT
43 AATGAAAAGCTAGGAATAAAAGAGATTGGTCTACTTCCAGCCATTTGCGCTTTACATAGA
44 CATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGG
45 TTCTATTTAAAATGAAATCTAAAGATAAACCCTAGTCATAATCAAGTGGGTTGTGTTAAA
46 ATACAAGCACCTTTTATACTCTCGCAGCGTCAGTGGCGCGTTGTGAAAAATTTTCACTTT
47 TTCTCAGGGCTTTTACCCAACTGCCGACAAATAAAAGCCGTATTTAAGGAATGTGATTAG
48 TTTACTTTCCAATGCTTTCTCTTTTTTGTAGGGTA
49 >WashU_Sbay_Contig635.57 YOR278W 5' untranslated region, Contig c635 91073 - 93072, 2000 bp (revcom)
50 ACGTACAGATGGCGTCTCCTCCTTTCGCGAGCCCCTTGCCTTGTGACTTCAGCCTAACTT
51 CTTGACTAGAAGATACAACAAGAAATACTCAAATCGGTTATTGTGCAACTCATCCCTCAG
52 ACAGTTTGGTAAGAAACACCGAAGACTATTTCCGATATCTCAAAGAATGACAAAAGTATA
53 CATTATATATGCAAGAGAGGCAAGAAAAGAGTAAAAAAGAGTAAAAAAAACATGTACACC
54 TAGAGCGAACCAGTGATAATTTGCTTCTCAATGAAGAAAAAGCGATTAAAACTGGATTAG
55 ATTTCATTAAAGAAAAGCTAGGAACAAAGAAATTGGTCTACTTCCAGCCATTTGCGCTTG
56 ACATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGA
57 ATGATGGCTCTTTTAAATTGAGATCTAAAAGAAATATCCTGGAAAAGAGTAGAGAAGAGT
58 CCAAACTGTAGGAATTCAATCGCTTTTTATACTCTCATCGCGGAAAAGACGCGCTGTGAA
59 AAATTTTCTCTTTTTCTTAGGGCTCCTATCCAGCTGCCTGCGAACAAAAGCCGTATTTAA
60 AGCATGATTTTCACTACTATGTATGTTCTTTCTGC
61 >SGD_Scer_YDR047W HEM12 "Uroporphyrinogen decarboxylase, catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; activity inhibited by Cu2+, Zn2+, Fe2+, Fe3+ and sulfhydryl-specific reagents"
62 AGCGTTATAACCTGTTCTTTGCTTTATTTTTTTTTTTTTTGTTCTTCCTTTTCTCGAAGA
63 GAGCTTACCAAACACAATTCTGAGATAATGCTTGATGAATTGAAGAACCTATCGATCACT
64 CTATGTTACCTTCGTCTGGAACATCACTAATTCGAGCGGTAAAGATGAAAATGGCAGAAC
65 ATTTCGCTGGCAAAATTAAAACTCTTGCCTCATTTTTTTTTGCTTTCCTCTCCTGCCGCC
66 AAAAACCCCGAACCCTGTCCTGTATATACGAGAAACATTGAAAAAGATCGTGTATGATAG
67 CGCCAAGATGGCGGATAAACTAACACTATTGACAGGTTGAGGCCAAGGATATATTACTTG
68 CTAACAGAAAGAGATACTGTCACCACAATTGCCCGCGTACGTATACTACAACATGTTCTC
69 TATATATCACCCACTCTTTCGCAGTGCTACGTACGCCAAAAACGCGCGCATGGAAGTAAA
70 GAAGTTTTTTCTTTTAAGAGCGAAGCTCCATTAAAAGCCTTGAATATAAACTAGTGCGAA
71 GTAGTATGATCCGAAGACACCAATTGCTGGTGCAGCATAGGAATATGTGGCGTCCGAAAA
72 AGAGCCTTTAACAATCCACGGCGAAACAAGGCACCGCTGTGCATTTAAAACATGCCGTTC
73 CCGTACCAAGTTATATTGTTACGGATGAATCCAAAATAATTTGTTAAAAAATGCTGCCGT
74 TCCGTCCCATTGAGTTTTATTTTCCTTCTCATGGCACCTTCTTCGTTTCTTCATCCTGCA
75 TTAGACTTACTAGTGTGCTTGCCGGATGCGTGCTTTTTTTTTCCGGCCGACACATATCGC
76 TGAGCTGGAAGGACACCTTTTAATGTAGCCGTGCATGCGGCTCCGCGAAAAGAGCTCTGC
77 TATATTTCTCTACCTGAACTTCGAGCCGCGATCAACGAAAGCTCTCATCCAAGGCTCGTT
78 TTTCTTGACAGAAGCATGACAGTAAAATATGCGGTCATTT
79 >MIT_Spar_c130_3923 YDR047W 5' untranslated region, Contig c130 9341 - 11340, 2000 bp (revcom)
80 AGCGTTATGATGTGTTATTTGCTTTTATTTTCTTCTTTCTTTGTCTCGAAGATAACCTAG
81 CAAACACAATTCTAAGAAAATTCTCGATGAATTGGTTGTCAGCGCTTCCTATTTACTCTA
82 TGTCCACTTCGTTTGAAACATCAGTGGTTCGAGCAGTAATGACAAAAAGGGCAGAACATT
83 TCGTTGGCAAAATTTAAACTCGTGCCTCTCATTTTTTTTACTTTTCTCTCCTGCCACCAA
84 AACCCCGAACCCTGTCCCGTATATACGAGGAACATTGAAAAAAAATCGTGTATGGTAGCG
85 CCAAGATAGCGAATAAACTATCAGTATTGGCAGGGTGAAGCTAAGGATATGTTGTTTGCT
86 AACAAAGGGAAATGCTTTCGTTATAATCGCCCGCGTGCGTCTACTAAAATATGATCTATA
87 TATACCACCCAGTCTATTGCAGTGTTACGTACATCAAAATGCGCGCATGTAAGTGAACAA
88 GTTTTTTTTGTTTAAAGAGCGATTTTCCAATAAAGGCTTTGGATATACACTGGTGCAAAA
89 TATATGGTCAATGACGCCAATTACTGGTGTAGCATGAGAATACGTCGTCCGAAAGAGTTT
90 TTTTTTACAAACTACGGCAAAGCAAAGCACCACTGGCGCAATTCAAAACATGCCGTCCCC
91 GTACTAAGTTATGTACGTTATTATGGACGGATCCAAAATTATACTCTAAAATGCTGCCGT
92 TCCGTCCCATTGAGTTTTATTTTCCTTCTCGTAGCACCTTCTTCGTGTCCTTTCCTTCTT
93 CTGCATTAGGCTTACTAGCGTCCTTTCCTTGCCGGATGCGTGCTTTTTTTTTCCGGCCGA
94 CAAATCTCGCTGAGTTGGAAAGACACCTTTTATATAGCCGTACGTGCGGCTCCTCGAGAA
95 AGGCCCTGCTATATTTCACTAGCTGATCCTCGAGCTGCGATCAACGAAAGCCCCATCCAA
96 AAGGCTCCTTTTTCTTCAAAGAAGCATGACAGTAAAATAT
97 >MIT_Sbay_c896_21277 YDR047W 5' untranslated region, Contig c896 2230 - 4229(revcom), 2000 bp (revcom)
98 AGTGTTAACAGTATCTTTTGCCTTTTTTTATTCTAATAGCTACCCCAGGAATCACTATTT
99 AGCAAAGATCGTTTGCAAATTGGCCGTCAGTACGTTCTAAGTTCTTTAGAACATCATTGG
100 CTCGAGCATTAGTGACACGAATAGGAAAGCATTTCGTTGACAAAAATAAAATTGTTTCTT
101 TATTTTTTCCCTCTTTTCCATGGCGTCAAAAAACCCCGAACCCTGTATAAACGAGGAAGC
102 TGCATGGTAGCGCCAGAAAAGGCAGATAACCTTTAACAGTGCTGACAGAACAACGTCAAA
103 CATGTGCGGATAATGCCTTCGCTGACGGCAAGAAATTATATACGCCTCGAAACTGTAGAA
104 CGTCTTTTGTGCCGCTTGGTAACAAATAAACCTAGCCGGGGCCAGAATTTCACCCGTACA
105 TACTTACTGTTACATACTGCATGCACGCTACGCATTCTCACCGAACATCGAATCTGCCTG
106 CAGAAGCGAAGAAAAGCAAGTCTTCGAAGAGCAAGCTTACATCCATCGTGTTGAACACAT
107 ATGCCCAGCAAAGGGATCGGATGACGCCCAACTAACATTGGAATTTGTGACGCAAGGCTG
108 AAAGGCACTTCTCTATAGCCCACGGTGAAGCCTTACGCTATTGACAAGACAAAACATGCC
109 GATCCAAGCCAGGCGAAACGGGCCTAGCACTACGCAGCCAAACACTGGCGTTCCGCCCGT
110 CCCATCCAGTTTCATTTCTTATTTCGTTCTGCCTTGGGCCTAGCAGCGTGCTTGCCGGAT
111 GAGTTTTTTCCATTTTCCTACCGGCTCATCTCGCTAAGCTGAAAGGTCAGTTTTATAGCC
112 GTGTGCGCGGCATCGAGAGACAGGTTCAGCTAATGATATTTGCCTAATTCTCGAGCTGAG
113 GCCAATGAAGGCAGCTTCCAGGGCTCGTTTCTGCTCGGGAAAAAGCATACCACACATTTG
114 CACGGCTTTTATGTGCCATAGTGCCACCACTAGCCCCCAG
115 >WashU_Skud_Contig1362.1 YDR047W 5' untranslated region, Contig c1362 1 - 761, 2000 bp (revcom)
116 AGTGTTGATGGTATCTTTTGATTTTTTCTAGATTGGTAGCAAGCTCAATTGGCACAGCTC
117 TAAAAAAAGCCTTGTGAATTGGATAGTACCTTCTTTCGTTTGGAACATTACTGCTTCGAG
118 CAATAAACATACGAAAGGCAGAACACCTCGTTGACAAAACTGAAACTATTTCTTCAATTT
119 TTTGGCCTTTTTTCCTGCTGCCAAAAAACCCCGAATCATGTAGAAGCGAGAAGTAAAACA
120 GAGGAAGTGTATGGTAGCGCCAAGGAAAACGGGCAATACTTAGAAAGAATGACAGAGCTC
121 AGCCAAGTGTAAGCTAAGTGTTGACAAGGGAAGGTACATTGGGCCCCGAAAAAATTTGCT
122 AATGCTCGAAGAGCTCTCAATCAATCACCCACATATATGTACTACAGTATATTTATACTT
123 TCCACGCAGTCTCACGCAGTGCCACCTTCATCACCATGCGTGTAACTAATCGAGCAAGCT
124 GTTTTACGAAGGGCAGCTTTCCTATAAGCGTTTTGAACATGCATGGCTGCACTGCAATGA
125 GATCAGGCGACTCCAATTCCATAGCCTAGCACGGGATTAAGTAACGAGAAACTGAAAGAG
126 ATAATTTTACAAACCCGGACGAAGCAGAGCACTTGCTGGAACAAATCAAACATGCCGTCC
127 CCTACCAGCTCTCGAAGCGGGCCTAGCATTACTCGATCGAACGTTGCCGTTTAGTCTTAT
128 TTTCCTTTCCGTGCTGCGCTGCTTTTTTCTTGCATTGGGCT