bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM4-HEM15.fa
blob2adb46f4a937ff2900d694f71b943deb49bf7d9f
1 >SGD_Scer_YOR278W HEM4 "Uroporphyrinogen III synthase, catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in the heme biosynthetic pathway"
2 CTCTCGAGCAAGGTCTATTTTACCTTTCTGTTTCCTTATCCTTTGACACTAAAATTCAAA
3 AAACTCACTAGAAAGTTCACTAAAGCGCCTTAGCTGACTACAGCACAACCCAACCCCAAA
4 AACTAGTGAACTACACACTAAGAGAATTTATGGTATTTCCATAATTGAAGTATATGTACG
5 ATGTATACAATGTAAACAAGAGAGTAATGAAGTGAAGATATGTACACCTAGAGCGAACCA
6 ATGATAATTTGTTTTCTTAATTAAGAAAAACCATTAAAACTGGATTAGATTTCAATAATG
7 AAAAGCTAGGAACAAAAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGACATA
8 TGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGTTTT
9 CTTATCCTGAAGGATCCTGCAAATGAAGTAAGTTCAAAGAATTGAAATGAAATCGCCTTT
10 TATACCCTCGCCGCACCAAGGAGCGCGCTGTGAAAATTTTTCGCTTTATCTCTTAGGGCT
11 CCTACTGTCGGTAGAGAAAAGTTGAGTATATTTAAAGCATGAGGTAACTTTTCTGCCCAT
12 TTTTACTTCTATTTCCATTTGAATTCAGAAAAGTG
13 >MIT_Spar_c261_21317 YOR278W 5' untranslated region, Contig c261 32269 - 34268, 2000 bp (revcom)
14 CGTTCCAAGCAGGGTTTATTCTATTTCTCGGCTCCTTTACCCTGTAACTTCGAGATTCAA
15 AAACTCGCTATAACTTCACTAAAGCGCTTTAGTTGACTACAACACAACCCAACCCCAAAA
16 TAAACTGTCCAACTACACAATACCGAGGATAATCCACGATATTTCGGTGATTGAAGTATA
17 TGTATTACGTATGCAATGTAAGCAAGAAACTAACAAAATGAATATGTACACCTAGAGCGA
18 ACCAATGATAATTTGTTTTCTTAATAAAGAAAAACTATTAAAACTGGATTAGATTTCAAT
19 AATGAAAAGCTAGGAACAGAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGAC
20 ATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGT
21 TCTTTTATCCTGAAGGATAAACGGAAAGCTCCCGATTAAAAACAAGTATAGAGTACTGGA
22 ATAGAATCGCCTTTTATACCCTCCCTCGCCGCATCAAGAAGCGCGCTGTGAAAATTTTTC
23 GTTTTTCTCTTAGGGCTCCCATCCAACTGTCGGCGAGGAAAAGTTGTATATATTTAAAGC
24 ATGAGGTAACTTTGTTGCCCATTATCTTTTTTGTT
25 >MIT_Smik_c492_20940 YOR278W 5' untranslated region, Contig c492 3260 - 5259(revcom), 2000 bp (revcom)
26 ACTTTCAAACACACTCTGGTGTACTCCTCGGTCCCTTCATCTCATTTCTTCAAGATGCAG
27 AACTTCGCCGGAAGTAAACTAAAGTGCTTTAATTAATCAAAAGACAACTTAATTCCCAAA
28 CGGAAATGCAGGCTAGACAAACCGAAGATAATCCCCGATATTTCTGAGTTTAACAAATGT
29 ATGTATAATATGTATGCAATGTAGGCAAGAAAATAACGAAGTGAAGATATGTACACCTAG
30 AGCGAACCAATAATAATTTGTTTTCTTACTAAAGAAAAACTATTAAAACTGGATTAGATT
31 TCAATAATGAAAAGCTAGGAACAAAAGAAATTTGTCTACTTCCAGCCATTTGCGCTTTAT
32 ATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAAT
33 GATGGTTCTTTTAAACCAAAATTTAAAGAAAAATCTTAACGGTAATATGAGTAGGAGGTT
34 GGAATGGGATCGCTTTTTATACCCTCATTGTGATAAGAGACGCGCAGTGAAAAATTTTCG
35 CTTTTTCTTAGGGCTCCTATCTAACTCTCGGGCGAATAAATATCATGAATGTATTTAAAC
36 GTCAAGTTAGTTAAATGTTTGAGTCTGTTTCTTTT
37 >WashU_Skud_Contig1682.4 YOR278W 5' untranslated region, Contig c1682 3379 - 5378, 2000 bp (revcom)
38 CTCTTCAAACAGACTCCAATTCACTACTGAGCTCTTACCTTGTGACTTCAAGACTCACTA
39 CTCAGTTGAAAGACACGCTCAGTACCAAATTCGGCTGCGAGGCAACTAACGCCTTTAAAC
40 AGGTAGGTAAGGAACAATACCGAAAGGCCATCTCCGATGTTTCGAAGATTGGCAAATGTA
41 TATATTATGTATGCAATATAGGCAAGATGATAACGAAGTAGAGATATGTACACCTAGAGC
42 GAACCAATGATAATTTGTTTTCTTAATGAAGAAAGTATTAAAACTGGATTAGATTTCAAT
43 AATGAAAAGCTAGGAATAAAAGAGATTGGTCTACTTCCAGCCATTTGCGCTTTACATAGA
44 CATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGG
45 TTCTATTTAAAATGAAATCTAAAGATAAACCCTAGTCATAATCAAGTGGGTTGTGTTAAA
46 ATACAAGCACCTTTTATACTCTCGCAGCGTCAGTGGCGCGTTGTGAAAAATTTTCACTTT
47 TTCTCAGGGCTTTTACCCAACTGCCGACAAATAAAAGCCGTATTTAAGGAATGTGATTAG
48 TTTACTTTCCAATGCTTTCTCTTTTTTGTAGGGTA
49 >WashU_Sbay_Contig635.57 YOR278W 5' untranslated region, Contig c635 91073 - 93072, 2000 bp (revcom)
50 ACGTACAGATGGCGTCTCCTCCTTTCGCGAGCCCCTTGCCTTGTGACTTCAGCCTAACTT
51 CTTGACTAGAAGATACAACAAGAAATACTCAAATCGGTTATTGTGCAACTCATCCCTCAG
52 ACAGTTTGGTAAGAAACACCGAAGACTATTTCCGATATCTCAAAGAATGACAAAAGTATA
53 CATTATATATGCAAGAGAGGCAAGAAAAGAGTAAAAAAGAGTAAAAAAAACATGTACACC
54 TAGAGCGAACCAGTGATAATTTGCTTCTCAATGAAGAAAAAGCGATTAAAACTGGATTAG
55 ATTTCATTAAAGAAAAGCTAGGAACAAAGAAATTGGTCTACTTCCAGCCATTTGCGCTTG
56 ACATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGA
57 ATGATGGCTCTTTTAAATTGAGATCTAAAAGAAATATCCTGGAAAAGAGTAGAGAAGAGT
58 CCAAACTGTAGGAATTCAATCGCTTTTTATACTCTCATCGCGGAAAAGACGCGCTGTGAA
59 AAATTTTCTCTTTTTCTTAGGGCTCCTATCCAGCTGCCTGCGAACAAAAGCCGTATTTAA
60 AGCATGATTTTCACTACTATGTATGTTCTTTCTGC
61 >SGD_Scer_YOR176W HEM15 "Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; Yfh1p mediates the use of iron by Hem15p"
62 TCTTTAAACGTTCTTTTTTTTACTGCTAAATTTGTCCAAATAGCAGGTATGTGTTAAATA
63 TTTCTGTACTTCTTGTAAACCGACTCAAGTGGAACACGAGAATTTACGCTTGTTTGGTGT
64 CAAGCCAAGAGTGACCTTGACCGACCAAAAGTATTCCTTCGCGTCCTCCTTCTTCAATCC
65 CATATCCCCTACGAAAAAAAGCAGCATGAGAAAACGAAGGGCAGCAACTCCTTCGTCATA
66 TAAGGCTTACGGTGACCATTGAAGATTGGGCATGTCTAACGGCTATTGCCAGCGGAGATG
67 TTTCAAGGCATCCTACACATGCTACATATTTGTAATTATTTTACTGAGTTTGTGTATATA
68 AAAAACTTTTTTAAAAAAAAAAAATGGCCAGCATCCTCTTTCATGTAAAGCTGTTGAACC
69 TTCCTGAAATTTACTTCTAAAATTGTTCAGTAAAACTGCTTGTTAAAAGTGCGAAGAGTT
70 CTTTTTTAGCTTTTTTTGTCCTGCTGTTGAGCTGTTTTGCTTTACTGTTCAACAAAACAT
71 TGAAGATCTTTCACATTGCGCGTCGAAACCACAAACCGTCGAAAACAATGGTCATCTAAA
72 TAAAGGGTTCTTATTAAACAGATTTAAAGCCAAGGACAAAATACAGGCACAGGTCAAGCA
73 AGAAGACAAACCGCATACGCCAAGACAAACCGTGGTGATTTAATTCTGCTGCTGATCGCT
74 TCCAACA
75 >MIT_Spar_c278_20970 YOR176W 5' untranslated region, Contig c278 32746 - 34745, 2000 bp (revcom)
76 TCTTCAAACGTTCTTTTCCTACTACTAAGCTTTTCAATAAATAGCGGGTATATGCTAAAT
77 ACTTCTTTGCTTCTTGTACGACCTACTTAATTGAAATACGGATATTTTTGCTTGCTTGGT
78 GCCAAACCAAGAGTGACCTTGACCGACTAAAAGTATTCCTTCGCGTCCTCCTTCTTCAAT
79 CCCATATCCCCTACTGAAAAAAGCAGCGTGCGAAAATGAAGGGCAGCAACTCCTTCGTCA
80 TATAAGGCTTAGGTAATCTTTCAAGGTCAGGTATATCCAGCTGTCGTTACGAGTAGAGAT
81 ATTTCAAGCTGTCCTGCACATGCTACATATTTGTGATTATTTTTATTGAGTTGCGTATAT
82 AAAAAAACAATCTAAAAAAAAAAAAAATGGCCAGCATCTTCTTCCATGTAAAGCTGTTGA
83 ACCTTGCTAAAATCTATTACTATAATTGTTCAGTAAAGTTGCTTGTTAAAAATGCGAAGA
84 GTCTTTTTTAGCTTTTTTTGCCCTGCTGTTGAGCTGTTTTGCTTCACTGTTCAACAAAAC
85 AGTGAAGATCTTTCGAATTGCGCGTCGAAACCACAAACCGTCGAAAATAATGGTCATCTA
86 AATAAAGGGTTCTTATTTGAACAGATTTAAAGCTCAAAGACACGATACAGGCACAGGTCC
87 AGAAAGAATACAAAACGCAAACGCCAAGACAAATTGTGGTAATTTCATTCTGCTGCTGAT
88 CACTGCC
89 >MIT_Smik_c935_20455 YOR176W 5' untranslated region, Contig c935 1803 - 3802(revcom), 2000 bp (revcom)
90 TCTTGAATTGCAATTTTCTACTACTGAAGTTACCAACAATTAGCAAATATGTGATGAGTC
91 CTTTTTACGTTCTTGTATAACCTAAGTTAAATACAAAGGTTTATGCTCCTTTAATGATCA
92 GACCAACAGTGATCTTGGCCGACCAAAAGACTCCTTCGCGTCCTCCTTCTTCAAGTCTCA
93 TATCCCCTACCAGAAAAAGTAGCAGGCGAAAATAAAGAGCAACTGCTCCCCCCCATATAG
94 AGCTTACCATAATTTCTCAAGGAAAGGTATCTCCAGTTGTCGTAAAGAATAAAGAAGTTT
95 CAACGTGTCCTGCATGTTCTACAAATTTGCAATTGACTTTACTAAGTTGCATATATAAAA
96 CTTGTATTAGATAAGTTAGCCAGCATTTTCATTCAAGCTAAGATGTTGAATATGCCAAAG
97 CACATTGCTGAAATTAATCAGTAAAGCTGCTTGCTGAAAGTGGAAATATTTTCAGCTTTT
98 TTTGCTCTGCTGTTGAGCTGTTTTACTTCATTGTTCAACAAAACAATAGAGTTCTCTCCA
99 ATTGCGCGTCAAAACCACAAACCGTCGAAAATAATGATCATCTAAATAAAAGAGTTCACG
100 TTTTCACATATTTAAAGTTGAAATACTCCATACAGGCACAGGTCTAACAAGAAGACAACG
101 CATTCGATAAAACTAATCGTGGTAATTTTTATATCGCTGCTAGCCACTACCAACAATGTA
102 CAATTTT
103 >WashU_Skud_Contig2050.4 YOR176W 5' untranslated region, Contig c2050 12271 - 14270(revcom), 2000 bp (revcom)
104 TCTTAGTTTATAGCTTTTCTACTACTCTGGTCATAAACGAACAGAAGATAAGCAAGAAAT
105 CTTTTTTTCCTTCTTTTACGGTCTATTCAAGTGAAGCACGGGGATTCCCGCTTGTTTAAT
106 AATCAGACCAACAATGATATTGACCGACCAAAAGAAGTATTCCTTCGCGTGCTTCTCCTT
107 TCTGTGTCAAATCCCCTACTGAAAAAGCAGCATTGGGAAAGGAACAGCAGCTTCTCCTTC
108 GTCGCAGAGAGCTCGCGGTAGCATTTCATTGTCAGGTATTTATGATATTTGCTAAGAATA
109 ATTAAAATGTCTTCAGGTCTTGCACATACTCCTACATATTTGTAAGTATTTTACTGATTT
110 GAGTATATAAAAGCCGTACTAAAACTAACCAGCACCTGTAGCAAGGTGCAAAATGTTGAA
111 CCTTTCCGAAATTTATTGCCAGAAACCAAGAGCTAAAAGTGCTTGGTAAAAGTGAAAAGA
112 CTCTTTTTCAGCTGTTTTTTGTTCTGCTGTTGAGCTGTTTTGTTCCATCTGTTCAACAAA
113 ACAGCTTCACTGGATCTTTCAAAGTGCGCGTCGAAACCACAAACCGTCGAAAATATTGAT
114 CATCTAAATAAAGGGTTCTTATTTGCACAGTTTCGCATTGAAATATTCCATTCAGGCACA
115 GATCAACAAGAAGACAAAAAGGTATTCGAGAAGACTAATTGTGGTATTTTTACTTTGCTG
116 CTGACCA
117 >WashU_Sbay_Contig480.2 YOR176W 5' untranslated region, Contig c480 3444 - 5443(revcom), 2000 bp (revcom)
118 TTTCAGGGAAGCACCATGTGCACGAATTGTTCTAGAAAGCATTTTTGGTTCGTAAATTCT
119 CTACAACTGAACTTATTAACAAATAGCAAACAGAGAAGAAAATTTTTTTTTTCCTTCTTG
120 TATGGTCAGTTAGTTGAAAACACGGAGATTTTCACTTGTTTAGTAAGCAGAGCCATAATG
121 CTCTTGACCGACCAAAAGAAGTATTCCTACGCGAGCTCCCTCTTCAAGTGCCAAATCCCC
122 TACTGAAAAAAGCAACATGAGAAGCAAAGAGATGCCTCTCGCCATGCAGGGCTTGCGGTC
123 ATGTTTTCTACGTTCAATTGATTTTGTTACAGCTGAAAGATGTTTATAAAACTGTCTTGC
124 ATATGCTCTATTTACTTGTAAACAATTTTATTAAGTTGCGTATATATGATCGTACTAAAA
125 ATTGGCTGGCGCGTTCTCCAGGCAGAGTTGGTTGAACCTTGCTCGAATTGATAGCTCAAA
126 GTGGAGAGACTCTTTTTTAGCTGTTTTTTGTTCTGCTGTTGAGCTGTTTTGCTCCACCTG
127 TTCAACAAAATGGCAGAGATCTTTCGAAGTGCGCGTCGAAACCACAAACCATCAAAAATA
128 TCGACCATCTAAATAAAGGGTTCTTGTTTGAATAAATATCAGGCGAAGCTCTTCATACAG
129 GCACAGGTCAGATAAGAAGACAATTCGAATTCGAGAAGGATATTCGTGGTATCTTTAATC
130 TGCTGCT