t/data/psi_xml.dat

   1 <entrySet xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:psi="net:sf:psidev:mi" xmlns="net:sf:psidev:mi" xmlns:xin="http://dip.doe-mbi.ucla.edu/xml/XIN" xsi:schemaLocation="net:sf:psidev:mi MIF.xsd" level="1" version="1">
   2  <entry>
   3    <interactorList>
   4      <proteinInteractor id="G_1">
   5        <names>
   6          <shortLabel/>
   7          <fullName>adenine specific DNA methyltransferase (dpnA) HP0050</fullName>
   8        </names>
   9        <xref>
  10          <primaryRef db="DIP" id="3048N"/>
  11 <secondaryRef db="PIR" id="B64526"/>
  12 <secondaryRef db="GI" id="2313123"/>
  13 <secondaryRef db="RefSeq" id="NP_206851"/>
  14 </xref>
  15 <organism ncbiTaxId="85962">
  16 <names>
  17 <shortLabel/>
  18 <fullName>Helicobacter pylori 26695</fullName>
  19 </names>
  20 </organism>
  21 </proteinInteractor>
  22 <proteinInteractor id="G_2">
  23 <names>
  24 <shortLabel/>
  25 <fullName>hypothetical HP0001</fullName>
  26 </names>
  27 <xref>
  28 <primaryRef db="DIP" id="3047N"/>
  29 <secondaryRef db="SWP" id="O24853"/>
  30 <secondaryRef db="PIR" id="A64520"/>
  31 <secondaryRef db="GI" id="2313078"/>
  32 <secondaryRef db="RefSeq" id="NP_206803"/>
  33 </xref>
  34 <organism ncbiTaxId="85962">
  35 <names>
  36 <shortLabel/>
  37 <fullName>Helicobacter pylori 26695</fullName>
  38 </names>
  39 </organism>
  40 </proteinInteractor>
  41 <proteinInteractor id="G_4">
  42 <names>
  43 <shortLabel/>
  44 <fullName>GTP-binding membrane protein (lepA) HP0355</fullName>
  45 </names>
  46 <xref>
  47 <primaryRef db="DIP" id="3049N"/>
  48 <secondaryRef db="SWP" id="O25122"/>
  49 <secondaryRef db="PIR" id="C64564"/>
  50 <secondaryRef db="GI" id="2313456"/>
  51 <secondaryRef db="RefSeq" id="NP_207153"/>
  52 </xref>
  53 <organism ncbiTaxId="85962">
  54 <names>
  55 <shortLabel/>
  56 <fullName>Helicobacter pylori 26695</fullName>
  57 </names>
  58 </organism>
  59 </proteinInteractor>
  60 <proteinInteractor id="G_X">
  61 <names>
  62 <shortLabel/>
  63 <fullName>bogus-binding membrane protein (lepA) HP0355</fullName>
  64 </names>
  65 <xref>
  66 <primaryRef db="DIP" id="N"/>
  67 <secondaryRef db="SWP" id="O2"/>
  68 <secondaryRef db="PIR" id="C4"/>
  69 <secondaryRef db="GI" id="2"/>
  70 <secondaryRef db="RefSeq" id="207153"/>
  71 </xref>
  72 <organism ncbiTaxId="85962">
  73 <names>
  74 <shortLabel/>
  75 <fullName>Helicobacter pylori 26695</fullName>
  76 </names>
  77 </organism>
  78 </proteinInteractor>
  79
  80 </interactorList>
  81 <interactionList>
  82 <interaction>
  83 <experimentList>
  84 <experimentDescription id="DIP_5317X">
  85 <bibref>
  86 <xref>
  87 <primaryRef db="pubmed" id="11196647"/>
  88 </xref>
  89 </bibref>
  90 <interactionDetection>
  91 <names>
  92 <shortLabel>Two hybrid test</shortLabel>
  93 </names>
  94 <xref>
  95 <primaryRef db="DO" id="DO:00018"/>
  96 <secondaryRef db="PSI" id="MI:0018"/>
  97 </xref>
  98 </interactionDetection>
  99 </experimentDescription>
 100 </experimentList>
 101 <participantList>
 102 <proteinParticipant>
 103 <proteinInteractorRef ref="G_1"/>
 104 </proteinParticipant>
 105 <proteinParticipant>
 106 <proteinInteractorRef ref="G_2"/>
 107 </proteinParticipant>
 108 </participantList>
 109 <xref>
 110 <primaryRef db="DIP" id="4305E"/>
 111 </xref>
 112 </interaction>
 113 <interaction>
 114 <experimentList>
 115 <experimentDescription id="DIP_5318X">
 116 <bibref>
 117 <xref>
 118 <primaryRef db="pubmed" id="11196647"/>
 119 </xref>
 120 </bibref>
 121 <interactionDetection>
 122 <names>
 123 <shortLabel>Two hybrid test</shortLabel>
 124 </names>
 125 <xref>
 126 <primaryRef db="DO" id="DO:00018"/>
 127 <secondaryRef db="PSI" id="MI:0018"/>
 128 </xref>
 129 </interactionDetection>
 130 </experimentDescription>
 131 </experimentList>
 132 <participantList>
 133 <proteinParticipant>
 134 <proteinInteractorRef ref="G_4"/>
 135 </proteinParticipant>
 136 <proteinParticipant>
 137 <proteinInteractorRef ref="G_2"/>
 138 </proteinParticipant>
 139 </participantList>
 140 <xref>
 141 <primaryRef db="DIP" id="4306E"/>
 142 </xref>
 143 </interaction>
 144 <interaction>
 145 <experimentList>
 146 <experimentDescription id="DIP_5318X">
 147 <bibref>
 148 <xref>
 149 <primaryRef db="pubmed" id="11196647"/>
 150 </xref>
 151 </bibref>
 152 <interactionDetection>
 153 <names>
 154 <shortLabel>Two hybrid test</shortLabel>
 155 </names>
 156 <xref>
 157 <primaryRef db="DO" id="DO:00018"/>
 158 <secondaryRef db="PSI" id="MI:0018"/>
 159 </xref>
 160 </interactionDetection>
 161 </experimentDescription>
 162 </experimentList>
 163 <participantList>
 164 <proteinParticipant>
 165 <proteinInteractorRef ref="G_X"/>
 166 </proteinParticipant>
 167 <proteinParticipant>
 168 <proteinInteractorRef ref="G_2"/>
 169 </proteinParticipant>
 170 </participantList>
 171 <xref>
 172 <primaryRef db="DIP" id="1E"/>
 173 </xref>
 174 </interaction>
 175
 176 </interactionList>
 177 </entry>
 178 </entrySet>
 179