1 BLASTN 2.2.4 [Aug-26-2002]
4 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
5 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
6 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
7 programs", Nucleic Acids Res. 25:3389-3402.
12 Database: /data/blast/yeast.nt
13 17 sequences; 12,155,026 total letters
18 Sequences producing significant alignments: (bits) Value
20 gi|6323989|ref|NC_001146.1| Saccharomyces cerevisiae chromosome ... 648.7 0.0
22 >gi|6323989|ref|NC_001146.1| Saccharomyces cerevisiae chromosome XIV,
23 complete chromosome sequence
26 Score = 648.7 bits (327), Expect = 0.0
27 Identities = 830/1000 (83%)
31 Query: 2697 ataggccaaaatcttcacatgattcaaaatttcaagaaaatgccccaatatttctcccat 2756
32 ||||| ||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |||
33 Sbjct: 133942 atagggcaaaatcttcatatgattcaaaacttcaaaaaaatgccccagtatttctctcat 133883
36 Query: 2757 ctaacccttgaaagtcacttgaaaatcattcaagcttggttatttgctgtggaacaaaca 2816
37 ||||| | |||||||| |||||||| |||||||| ||||||||||| || ||||||||
38 Sbjct: 133882 ttaaccttggaaagtcatttgaaaattattcaagcctggttatttgccgttgaacaaact 133823
41 Query: 2817 ctagatggaagaggcaaaatgggttccttggtaggggcctctgatgaatttaaaaacggt 2876
42 ||||||||||||| |||||||||||||| ||||| || || |||||||||||||| |||
43 Sbjct: 133822 ttagatggaagaggaaaaatgggttccttagtaggcgcgtcggatgaatttaaaaatggt 133763
46 Query: 2877 ggaggtgaaaatgccattttagaatattgtcaatggaccatggtctttatcaatcacttg 2936
47 || ||||||||||| ||| ||||||| || |||||||| ||||| ||||||||||| ||
48 Sbjct: 133762 gggggtgaaaatgcgattctagaatactgccaatggacaatggtttttatcaatcattta 133703
51 Query: 2937 tgttcttgttctgataatgttaatcaaagaatgcttttgagaacaaagctagaaaattgt 2996
52 || ||||| |||||||| | |||||||||||||| || || || || ||||||||||||
53 Sbjct: 133702 tgctcttgctctgataacataaatcaaagaatgctattaaggacgaaactagaaaattgt 133643
56 Query: 2997 ggtattctacgaatcatgaataaaataaaattgctagattatgacaaagtgattgatcaa 3056
57 || ||| ||||||| ||||| ||||||||| |||||||||| ||||| || ||||| |||
58 Sbjct: 133642 ggaattttacgaattatgaacaaaataaaactgctagattacgacaaggtaattgaccaa 133583
61 Query: 3057 attgaattatatgacaataataaactcgatgactttaacgtaaagttggaggcaagtaac 3116
62 ||||| |||||||||||||||||||| || || |||||||| || || ||||| | ||
63 Sbjct: 133582 attgagttatatgacaataataaacttgacgattttaacgttaaattagaggccaacaat 133523
66 Query: 3117 aaagcatttaatgtggatttaaaagatccactatcgttgttgaagaatctttgggaaata 3176
67 || || |||||||| |||||| | ||||||||||| || || || || |||||||| |||
68 Sbjct: 133522 aaggcttttaatgtagatttacacgatccactatcattattaaaaaacctttgggatata 133463
71 Query: 3177 tgtaaaggcacggataatgagaaactgttggtgtctttagtacaacatcttttcctttcc 3236
72 |||||||| || || ||||| || || || || |||||||| |||||||||||||||||
73 Sbjct: 133462 tgtaaaggtaccgagaatgaaaagcttttagtatctttagttcaacatcttttcctttct 133403
76 Query: 3237 agctcgaaattaatcgaagagaatcagaatccctccaaactatccaaacagttgaaatta 3296
77 || || || ||||| ||||| || || ||| |||| ||||| | || || |||||| |
78 Sbjct: 133402 agttcaaagttaatagaagaaaaccaaaattcctctaaacttactaagcaattgaaactt 133343
81 Query: 3297 atggattctttagtgactaatgttagtgttgcctcaacagccgacgaagaatcgaatatg 3356
82 ||||||||||| |||||||||||||||||||||||||| | || |||||| | ||||||
83 Sbjct: 133342 atggattctttggtgactaatgttagtgttgcctcaacttctgatgaagaaactaatatg 133283
86 Query: 3357 aacatggccattcagcggctttatgatgctatgcaaactgatgaagtagcacgtcgtgca 3416
87 || ||||| || ||||||||||| ||||| ||||| ||||||||||| |||||||| ||
88 Sbjct: 133282 aatatggctatccagcggctttacgatgccatgcagactgatgaagttgcacgtcgagct 133223
91 Query: 3417 atacttgaaagtagaactctgacnnnnnnnttagaagaaattcaagcggagagggattcc 3476
92 ||| | ||||||||| |||| || || ||||||||||| || || ||||||||
93 Sbjct: 133222 atattagaaagtagagctctaacgaagaaattggaagaaattcaggcagaaagggattct 133163
96 Query: 3477 ctaagtgaaaagctaggtaaagcagagcacgggctcgttgggcaattagagaacgagcta 3536
97 ||||||||||| || | || || |||||||| |||||||| || ||||| | ||| |
98 Sbjct: 133162 ttaagtgaaaagttaagcaaggcggagcacggactcgttggacagttagaagatgagttg 133103
101 Query: 3537 cacggaagagatcgtatactggccaagaaccaaagggttatgcaacagctggaatccgaa 3596
102 || | ||||||||||| | || ||||| || || |||||||| ||||||||| | ||
103 Sbjct: 133102 catgagagagatcgtattttagctaagaatcagagagttatgcagcagctggaagctgag 133043
106 Query: 3597 ctagaagaactgaaaaagaaacatcttctggaaaagcatcagcaagaagttgaactgaga 3656
107 ||||||| |||||||||| |||||| ||||||||||||||||||| || ||| |||||
108 Sbjct: 133042 ttagaagagttgaaaaagaagcatcttttggaaaagcatcagcaagaggtagaattgaga 132983
111 Query: 3657 aaaatgttaaccatattaaattccaggcctgaagaaagct 3696
112 |||||||| || ||||| ||||| ||||||||||||||||
113 Sbjct: 132982 aaaatgttgactatattgaattcgaggcctgaagaaagct 132943
117 Score = 317 bits (160), Expect = 1e-85
118 Identities = 388/464 (83%)
119 Strand = Plus / Minus
122 Query: 2170 gtttgaaaaagcaaccatctctaaacagcatttatcgaggtgggcctgaaattaatacaa 2229
123 ||||||||||||| ||||||||||||| |||||| |||||||| |||| | ||||| |
124 Sbjct: 134469 gtttgaaaaagcagccatctctaaacaatatttatagaggtggggctgagaacaatacga 134410
127 Query: 2230 gcgcgtccactcttccaggagacagaactaatagaccgccaatacactatgtgcaacgca 2289
128 | || || |||||||||||||||||||| || ||||| || ||||| ||||||||||| |
129 Sbjct: 134409 gtgcatctactcttccaggagacagaacaaacagaccaccgatacattatgtgcaacgaa 134350
132 Query: 2290 tcctggccgataagcttacgaccgacgaaatgaaagatttatgggttaccttgaggacag 2349
133 ||||||| || || ||||| | ||| || ||||||||||||||||| || || || || |
134 Sbjct: 134349 tcctggcagacaaacttactagcgatgagatgaaagatttatgggtaactttaagaactg 134290
137 Query: 2350 aacaattagactgggtagacgcctttatagaccatcagggtcacattgccatggctaacg 2409
138 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
139 Sbjct: 134289 aacagttagactgggtagacgcttttatagaccatcagggtcacattgctatggctaatg 134230
142 Query: 2410 tattgatgaactcaatatacaagacggcgcctcgggaacatttgacgaaggagttattgg 2469
143 || | |||||||| || || ||||| || || || ||| | ||||| || || ||||| |
144 Sbjct: 134229 tactaatgaactctatttataagactgcaccccgagaaaacttgactaaagaattattag 134170
147 Query: 2470 aaaaggaaaattccttttttaaatgttttagagttttatcgatgctttcacaaggtttat 2529
148 | || |||||||| ||||||||||| || ||||| ||||| ||||| ||||||||||| |
149 Sbjct: 134169 agaaagaaaattcattttttaaatgcttcagagtcttatcaatgctctcacaaggtttgt 134110
152 Query: 2530 atgaattcagcacgcatagactgatgaccgatactgtcgcagaaggtttgttctccacga 2589
153 |||| ||||| || ||||| | ||||| |||||||| ||||||||||| ||||| ||||
154 Sbjct: 134109 atgagttcagtacacataggttaatgactgatactgttgcagaaggtttattctctacga 134050
157 Query: 2590 agttggttaccaggaaaatggctactgaaattttcgtctgtatg 2633
158 | ||| || ||||||||||| ||||||||||| || ||||||
159 Sbjct: 134049 aactggccacaaggaaaatggccactgaaatttttgtttgtatg 134006
163 Score = 289 bits (146), Expect = 3e-77
164 Identities = 701/886 (79%)
165 Strand = Plus / Minus
168 Query: 1246 aaatgttgaagaattcaggttccaagaattcgaattcgaaggaaagtaactccagttcaa 1305
169 ||||||||||||||||||| ||||| ||||||| || ||||||||| | || | ||| |
170 Sbjct: 135384 aaatgttgaagaattcaggctccaaacattcgaactcaaaggaaagtcattcgaattcga 135325
173 Query: 1306 gttccggtcttttccaaaacttgaagcgtttggctaattcaagcgcatcgaataataatg 1365
174 |||| ||| | |||||||| ||||||||||||||||| |||| ||| |||||| |||
175 Sbjct: 135324 gttctggtatattccaaaatttgaagcgtttggctaactcaaatgcaacgaatagcaata 135265
178 Query: 1366 ccacctctccgaacaatgcatcagaacaccagcatcctcccgttggacaggaaacatcca 1425
179 | ||||||| | ||||||| |||| ||||| |||| || ||| | ||| ||||
180 Sbjct: 135264 cgggttctccgacctatgcatcccaacaacagcactctccagtgggaaacgaagtgtcca 135205
183 Query: 1426 cttcatctgcatcgtcctcgtcttttagaaggctaaatggaccctccaggtctacatcca 1485
184 ||||| ||||||| || || |||||||||| || |||| ||| || ||||||||||| |
185 Sbjct: 135204 cttcacctgcatcttcgtcatcttttagaaaactgaatgcaccttctaggtctacatcta 135145
188 Query: 1486 ctgaagcaaggccgctgaacaagaaagcgacactcaacactcaaaatctgtctcagtaca 1545
189 |||| || |||||| |||| || ||| ||||| | ||||| ||||| ||||||| || |
190 Sbjct: 135144 ctgaggcgaggccgttgaataaaaaatcgacattaaacacacaaaacttgtctcaatata 135085
193 Query: 1546 tgaacggcaagataagtaccgatgcgccaacatcgtcccagcatgcaaggtcgcattcag 1605
194 |||| || || ||||| |||| || ||| || ||||| |||||||||||||||
195 Sbjct: 135084 tgaatggtaaattaagtggagatgttcccgtatcctcacagcacgcaaggtcgcattcaa 135025
198 Query: 1606 tacagtccaaatattcgtactccaagaggacttcctctcaggcgtctaacaagctaacga 1665
199 | || || ||||||||||| |||||||||| ||| || |||||||| || |||||||| |
200 Sbjct: 135024 tgcaatcgaaatattcgtattccaagaggaattcttcacaggcgtccaataagctaacaa 134965
203 Query: 1666 ggcaacacactgggcagagtcattctgcgacaagtcttttatccctcggctctttaacaa 1725
204 |||| || || ||||| ||||| || || |||||||| | || | || || |||| |
205 Sbjct: 134964 ggcagcataccgggcaaagtcactccgcatcaagtcttctctctcaaggttcgctaacta 134905
208 Query: 1726 acttaagcaaattcaccactcctgatggcaaaatccatctagagatgccctcggacccat 1785
209 |||| ||||||||||| || || ||||| ||||| || |||| ||||| ||||||||||
210 Sbjct: 134904 acttgagcaaattcactacacccgatggtaaaatttatttagaaatgccgtcggacccat 134845
213 Query: 1786 acgaagtggaagttttgttcgaggacattatgtacaaaagaaacattttccaatctctat 1845
214 |||| |||||||||||||| || || |||||||| |||||||| ||||| || ||| |||
215 Sbjct: 134844 acgaggtggaagttttgtttgaagatattatgtataaaagaaatatttttcagtctttat 134785
218 Query: 1846 caggtgacaaacaagaagagctaatgagctacagtacggaaaagaaatggttgattgtga 1905
219 ||| ||||||||||||| || ||| ||||||| | || ||||||||| ||||||| |
220 Sbjct: 134784 cagaggacaaacaagaagctctgatgggctacagcattgagaagaaatggctgattgtta 134725
223 Query: 1906 aacaagatttacagaacgaattgaaaaagattagagcaaacacgacttcttcttccgctg 1965
224 | || |||||||| || || | ||||| || |||||||||| || ||||||||| |||
225 Sbjct: 134724 agcaggatttacaaaatgagctaaaaaaaatgcgagcaaacactacatcttcttccactg 134665
228 Query: 1966 cttctcgtacttcgatagcatcggatcaacatcccatactcacggctaattcaacacttt 2025
229 | || | |||||||| || ||||| || ||||| || || |||||||||||| | ||||
230 Sbjct: 134664 cctccagaacttcgatggcgtcggaccatcatcctatccttacggctaattcatctcttt 134605
233 Query: 2026 catcgcctaaatctgctctgatgacgagtgcttcttctccgacttctactgtatatagta 2085
234 | || || ||||||| | ||||||| || || |||||||| || || |||||||| || |
235 Sbjct: 134604 cgtctcccaaatctgttttgatgacaagcgcctcttctcccacctcaactgtatacagca 134545
238 Query: 2086 acaccctaaaccattccaccactctttcatctgtgggcacgtcaac 2131
239 ||| |||| ||||| || ||||||||||| || || ||||||||
240 Sbjct: 134544 acagtttaaatcattctactactctttcatcggtaggtacgtcaac 134499
244 Score = 200 bits (101), Expect = 2e-50
245 Identities = 512/649 (78%)
246 Strand = Plus / Minus
249 Query: 35 catcccccttcatgatcagcatcgagaattccggcaccaaggtcctcccagacatattca 94
250 |||| ||||| ||||| ||||| |||||||| ||||| || || |||||||| ||||| |
251 Sbjct: 136636 catcgccctttatgataagcattgagaattcaggcacaaaagttctcccagatatattta 136577
254 Query: 95 acgcggtcgtgctgatcaccatagtctccgcgggcaactccaacgtgtacatcggctcaa 154
255 ||||||||||||| |||||||| | ||||| || ||||| || |||||||| |||||||
256 Sbjct: 136576 acgcggtcgtgctaatcaccattctttccgcaggtaactctaatgtgtacattggctcaa 136517
259 Query: 155 gggtcctgtacagtctatccaaaaacgacttggcgccccggttcctgtcgatcgtgacca 214
260 | || ||||| ||||| || ||||| ||||||||| ||||| |||| | ||||||||
261 Sbjct: 136516 gagtactgtatagtctgtctaaaaatagcttggcgccaaggttcttgtctaacgtgacca 136457
264 Query: 215 agggcggggtcccctactttgccgttctggcaacatctgtattcgggttcctggccttct 274
265 || || || || |||||| | ||||| | ||||| || ||||| || |||| ||||
266 Sbjct: 136456 gaggtggtgttccatacttttctgttctatctacatccgtgttcggatttttggctttct 136397
269 Query: 275 tggaaacctccgcaggtagtggcaaggctttcaactggctgttaaacattactggtgtgg 334
270 | || || ||||| || |||||||| || |||||| | || ||||| ||||||||||
271 Sbjct: 136396 tagaggtttctgcaggcagcggcaaggcctttaactggttattgaacataactggtgtgg 136337
274 Query: 335 caggatttttcgcatggctgctgatttcattttcgcacatccgctttatgcaagcgataa 394
275 | || || || || ||||| ||||||||||||| || ||||| || |||||||| ||||
276 Sbjct: 136336 ccggtttctttgcctggcttttgatttcattttctcatatccgtttcatgcaagccataa 136277
279 Query: 395 gcaaacgcggaatatcgaggaacgatctgccttacaaggctcgcatgatgccttatctag 454
280 | ||||| || ||||||||| | || | ||||| || |||| |||||||||| | | |
281 Sbjct: 136276 ggaaacgtggtatatcgagggatgacttaccttataaagctcaaatgatgccttttttgg 136217
284 Query: 455 cctactacgcatcctttttcatcgccctgatagtcctgatccagggcttcactgcatttg 514
285 | || || ||||| ||||||||||| || || || ||||||||||||||||| || || |
286 Sbjct: 136216 catattatgcatcttttttcatcgctctaattgttctgatccagggcttcaccgctttcg 136157
289 Query: 515 cgcccagtttccagcctgtagatttcgttgccgcatacatatccgtcttcctatttgttg 574
290 | || | ||| |||||| |||| || || || ||||| ||||| | ||||||||| | |
291 Sbjct: 136156 cacctacttttcagcctatagactttgtcgctgcatatatatcaatattcctatttttgg 136097
294 Query: 575 caatctggttttcattccagctttggttcaagtgtcccataatcttgaagttgcaggacg 634
295 | || ||||| |||||||| ||||||| ||||| | | || ||| |||| |||||||
296 Sbjct: 136096 ccatatggttatcattccaagtttggtttaagtgccgcttactctggaagctgcaggata 136037
299 Query: 635 tcgacatagattccgaccgccgcgaaatagaggagcaggtatggataga 683
300 |||| || ||||| |||||||| ||||||||||| ||||||||||||
301 Sbjct: 136036 tcgatatcgattctgaccgccggcaaatagaggagttggtatggataga 135988
305 Score = 174 bits (88), Expect = 1e-42
306 Identities = 154/176 (87%)
307 Strand = Plus / Minus
310 Query: 4041 aaactaaatgatttaaggagggccttggctgaaattcaaatggaaagtaatgatatttcc 4100
311 ||||||||||| ||||| |||| ||| ||||||| ||||||||||||||||||||||||
312 Sbjct: 132598 aaactaaatgacctaaggcgggctttgactgaaatccaaatggaaagtaatgatatttcc 132539
315 Query: 4101 aagttcaatgtcgaagaacgtgttaatgagctatttaacgaaaagaagtctttggctttg 4160
316 || || || ||||||||||||||||||||||||||||| |||||||| ||| |||||||
317 Sbjct: 132538 aaatttaacgtcgaagaacgtgttaatgagctatttaatgaaaagaaatctctggcttta 132479
320 Query: 4161 aagaggttaaaggaactagaaaccaaatataagggattcggtattgattttaatgt 4216
321 ||||| | || ||||||||||| ||||| || ||||| |||||||| ||||||||
322 Sbjct: 132478 aagagactgaaagaactagaaacaaaatacaaaggatttggtattgactttaatgt 132423
326 Score = 151 bits (76), Expect = 2e-35
327 Identities = 169/200 (84%)
328 Strand = Plus / Minus
331 Query: 3756 aatattcagaaggtattacaggacggattgtcgagagcgaagaaagattataaagatgac 3815
332 ||||| || ||||| |||||||||||||| || ||||| || || ||||| || |||||
333 Sbjct: 132883 aatatccaaaaggtgttacaggacggattatcaagagcaaaaaaggattacaaggatgat 132824
336 Query: 3816 tcgaaaaaattcggtatgacacttcaacctaataaaaggctaaagatgctaagaatgcaa 3875
337 || ||||||||||| |||||||||||||||||||| || |||| ||| |||||||||||
338 Sbjct: 132823 tcaaaaaaattcggcatgacacttcaacctaataagagattaaaaatgttaagaatgcaa 132764
341 Query: 3876 atggaaaatattgaaaatgaagcaagacagttggaaatgacaaactttgctgagtttgaa 3935
342 ||||||||||||||||||||||| || || | || |||||||| |||||||| |||||
343 Sbjct: 132763 atggaaaatattgaaaatgaagccaggcaactagagatgacaaattttgctgaatttgag 132704
346 Query: 3936 aaggaacgcctcgaacctcc 3955
348 Sbjct: 132703 aaagatcgtcttgaacctcc 132684
352 Score = 129 bits (65), Expect = 7e-29
353 Identities = 119/137 (86%)
354 Strand = Plus / Minus
357 Query: 4437 gaaatataccaagatgcttctccaagtcaagaaagaagaggcgagtactcagagctatct 4496
358 |||||||||||||| || ||||||| ||||||| ||| |||| ||||||||||||||
359 Sbjct: 132196 gaaatataccaagacgcatctccaactcaagaactaaggagcgaacactcagagctatct 132137
362 Query: 4497 gcaggatcaggtcccggatcttttcttgatgccttatcccaaaaatatggcactggtcaa 4556
363 ||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||||||
364 Sbjct: 132136 tcaggatcaggtcctgggtcttttctcgatgccttatctcaaaaatatggtactggtcaa 132077
367 Query: 4557 aacgtcaccgcatcggc 4573
369 Sbjct: 132076 aatgttactgcatcggc 132060
373 Score = 85.7 bits (43), Expect = 1e-15
374 Identities = 101/119 (84%), Gaps = 1/119 (0%)
375 Strand = Plus / Minus
378 Query: 890 tttttgacatggaagaggcaagaagagaaaaaacagatgtgg-aaactataatccctttt 948
379 |||||||| ||||||||| || | ||||||||||||||||| |||||| ||||||||||
380 Sbjct: 135742 tttttgacgtggaagagggaaagaaagaaaaaacagatgtggaaaactagaatccctttt 135683
383 Query: 949 acaaacaatagcacggacgctttccggagacaacaagacactgacggctgtgtggtaat 1007
384 | ||||||||||||||| ||| | ||| || | |||||||||||||||||| ||||
385 Sbjct: 135682 aagaacaatagcacggacccttcctacagataagaggacactgacggctgtgtgttaat 135624
388 Database: /data/blast/yeast.nt
389 Posted date: Aug 12, 2003 12:35 PM
390 Number of letters in database: 12,155,026
391 Number of sequences in database: 17
401 Matrix: blastn matrix:1 -3
402 Gap Penalties: Existence: 5, Extension: 2
403 Number of Hits to DB: 45,084
404 Number of Sequences: 17
405 Number of extensions: 45084
406 Number of successful extensions: 26
407 Number of sequences better than 1.0e-10: 1
408 length of query: 5116
409 length of database: 12,155,026
410 effective HSP length: 18
411 effective length of query: 5098
412 effective length of database: 12,154,720
413 effective search space: 61964762560
414 effective search space used: 61964762560