t/data/test1.wublastp

   1 BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
   2
   3 Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
   4 All Rights Reserved.
   5
   6 Reference:  Gish, W. (1996-2006) http://blast.wustl.edu
   7
   8 Query=  000086_1606_1131 this is your fake desc
   9         (21 letters)
  10
  11 Database:  test_orfs.fa
  12            307 sequences; 9460 total letters.
  13 Searching....10....20....30....40....50....60....70....80....90....100% done
  14
  15                                                                      Smallest
  16                                                                        Sum
  17                                                               High  Probability
  18 Sequences producing High-scoring Segment Pairs:              Score  P(N)      N
  19
  20 000086_1606_1131 [64 - 2] (REVERSE SENSE) length=64 uaccn...   128  1.7e-11   1
  21 000269_0423_3271 [1 - 78] length=78 uaccno=ER8QEOW01BBHO5       76  5.4e-06   1
  22 000780_0082_2331 [1 - 78] length=78 uaccno=ER8QEOW01AHI8T       75  6.9e-06   1
  23
  24
  25 >000086_1606_1131 [64 - 2] (REVERSE SENSE) length=64 uaccno=ER8QEOW01D7AWT
  26         Length = 21
  27
  28  Score = 128 (50.1 bits), Expect = 1.7e-11, P = 1.7e-11, Group = 1
  29  Identities = 21/21 (100%), Positives = 21/21 (100%)
  30  Links = (1)
  31
  32 Query:     1 THITHTYTHITHTSHTHHTHR 21
  33              THITHTYTHITHTSHTHHTHR
  34 Sbjct:     1 THITHTYTHITHTSHTHHTHR 21
  35
  36
  37 >000269_0423_3271 [1 - 78] length=78 uaccno=ER8QEOW01BBHO5
  38         Length = 26
  39
  40  Score = 76 (31.8 bits), Expect = 5.4e-06, P = 5.4e-06, Group = 1
  41  Identities = 17/22 (77%), Positives = 18/22 (81%)
  42  Links = (1)
  43
  44 Query:     1 THITHTYTHITHT-SHTH-HTH 20
  45              TH THTYTH THT +HTH HTH
  46 Sbjct:     2 TH-THTYTH-THTQTHTHAHTH 21
  47
  48
  49 >000780_0082_2331 [1 - 78] length=78 uaccno=ER8QEOW01AHI8T
  50         Length = 26
  51
  52  Score = 75 (31.5 bits), Expect = 6.9e-06, P = 6.9e-06, Group = 1
  53  Identities = 17/23 (73%), Positives = 19/23 (82%)
  54  Links = (1)
  55
  56 Query:     1 THI-THTYTHITHT-SHTH-HTH 20
  57              THI THT+TH THT +HTH HTH
  58 Sbjct:     2 THIHTHTHTH-THTHTHTHTHTH 23
  59
  60
  61 Parameters:
  62   B=5
  63   V=5
  64   E=0.0001
  65   links
  66   topcomboN=5
  67
  68   ctxfactor=1.00
  69
  70   Query                        -----  As Used  -----    -----  Computed  ----
  71   Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
  72    +0      0   BLOSUM62        0.324   0.122   0.430    same    same    same
  73                Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
  74
  75   Query
  76   Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
  77    +0      0       21        21   9.7e-05  71 3  11 22  0.40    21
  78                                                     29  0.44    22
  79
  80
  81 Statistics:
  82
  83   Database:  test_orfs.fa
  84    Title:  test_orfs.fa
  85    Posted:  11:50:04 AM CEST May 14, 2008
  86    Created:  11:50:04 AM CEST May 14, 2008
  87    Format:  XDF-1
  88    # of letters in database:  9460
  89    # of sequences in database:  307
  90    # of database sequences satisfying E:  3
  91   No. of states in DFA:  208 (22 KB)
  92   Total size of DFA:  39 KB (2056 KB)
  93   Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  94   No. of threads or processors used:  2
  95   Search cpu time:  0.00u 0.02s 0.02t   Elapsed:  00:00:00
  96   Total cpu time:  0.00u 0.02s 0.02t   Elapsed:  00:00:00
  97   Start:  Wed May 21 22:50:32 2008   End:  Wed May 21 22:50:32 2008