t/data/HM138502.gbk

   1 LOCUS       HM138502                1410 bp    cRNA    linear   VRL 22-APR-2010
   2 DEFINITION  Influenza A virus (A/California/07/2009(H1N1)) segment 6
   3             neuraminidase (NA) gene, complete cds.
   4 ACCESSION   HM138502
   5 VERSION     HM138502.1  GI:295002854
   6 DBLINK      BioProject: PRJNA37813
   7 KEYWORDS    .
   8 SOURCE      Influenza A virus (A/California/07/2009(H1N1))
   9   ORGANISM  Influenza A virus (A/California/07/2009(H1N1))
  10             Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
  11             Influenzavirus A.
  12 REFERENCE   1  (bases 1 to 1410)
  13   AUTHORS   Starick,E.
  14   TITLE     Direct Submission
  15   JOURNAL   Submitted (21-APR-2010) Friedrich-Loeffler-Institut, Suedufer 10,
  16             Greifswald-Insel Riems 17493, Germany
  17 COMMENT     Swine influenza A (H1N1) virus isolated during human swine flu
  18             outbreak of 2009.
  19
  20             ##GISAID_EpiFlu(TM)Data-START##
  21             Isolate         :: A/California/07/09
  22             Subtype         :: H1N1
  23             Lineage         :: swl
  24             ##GISAID_EpiFlu(TM)Data-END##
  25 FEATURES             Location/Qualifiers
  26      source          1..1410
  27                      /organism="Influenza A virus (A/California/07/2009(H1N1))"
  28                      /mol_type="viral cRNA"
  29                      /strain="A/California/07/2009"
  30                      /serotype="H1N1"
  31                      /host="Homo sapiens"
  32                      /db_xref="taxon:641809"
  33                      /segment="6"
  34                      /country="USA"
  35                      /collection_date="09-Apr-2009"
  36                      /note="lineage: swl"
  37      gene            1..1410
  38                      /gene="NA"
  39      CDS             1..1410
  40                      /gene="NA"
  41                      /codon_start=1
  42                      /product="neuraminidase"
  43                      /protein_id="ADF58339.1"
  44                      /db_xref="GI:295002855"
  45                      /translation="MNPNQKIITIGSVCMTIGMANLILQIGNIISIWISHSIQLGNQN
  46                      QIETCNQSVITYENNTWVNQTYVNISNTNFAAGQSVVSVKLAGNSSLCPVSGWAIYSK
  47                      DNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMS
  48                      CPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGAVAVLKYNGIITDTIKS
  49                      WRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHY
  50                      EECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGS
  51                      CGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQD
  52                      IVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSSISFCGVNS
  53                      DTVGWSWPDGAELPFTIDK"
  54 ORIGIN
  55         1 atgaatccaa accaaaagat aataaccatt ggttcggtct gtatgacaat tggaatggct
  56        61 aacttaatat tacaaattgg aaacataatc tcaatatgga ttagccactc aattcaactt
  57       121 gggaatcaaa atcagattga aacatgcaat caaagcgtca ttacttatga aaacaacact
  58       181 tgggtaaatc agacatatgt taacatcagc aacaccaact ttgctgctgg acagtcagtg
  59       241 gtttccgtga aattagcagg caattcctct ctctgccctg ttagtggatg ggctatatac
  60       301 agtaaagaca acagtgtaag aatcggttcc aagggggatg tgtttgtcat aagggaacca
  61       361 ttcatatcat gctccccctt ggaatgcaga accttcttct tgactcaagg ggccttgcta
  62       421 aatgacaaac attccaatgg aaccattaaa gacaggagcc catatcgaac cctaatgagc
  63       481 tgtcctattg gtgaagttcc ctctccatac aactcaagat ttgagtcagt cgcttggtca
  64       541 gcaagtgctt gtcatgatgg catcaattgg ctaacaattg gaatttctgg cccagacaat
  65       601 ggggcagtgg ctgtgttaaa gtacaacggc ataataacag acactatcaa gagttggaga
  66       661 aacaatatat tgagaacaca agagtctgaa tgtgcatgtg taaatggttc ttgctttact
  67       721 gtaatgaccg atggaccaag taatggacag gcctcataca agatcttcag aatagaaaag
  68       781 ggaaagatag tcaaatcagt cgaaatgaat gcccctaatt atcactatga ggaatgctcc
  69       841 tgttatcctg attctagtga aatcacatgt gtgtgcaggg ataactggca tggctcgaat
  70       901 cgaccgtggg tgtctttcaa ccagaatctg gaatatcaga taggatacat atgcagtggg
  71       961 attttcggag acaatccacg ccctaatgat aagacaggca gttgtggtcc agtatcgtct
  72      1021 aatggagcaa atggagtaaa agggttttca ttcaaatacg gcaatggtgt ttggataggg
  73      1081 agaactaaaa gcattagttc aagaaacggt tttgagatga tttgggatcc gaacggatgg
  74      1141 actgggacag acaataactt ctcaataaag caagatatcg taggaataaa tgagtggtca
  75      1201 ggatatagcg ggagttttgt tcagcatcca gaactaacag ggctggattg tataagacct
  76      1261 tgcttctggg ttgaactaat cagagggcga cccaaagaga acacaatctg gactagcggg
  77      1321 agcagcatat ccttttgtgg tgtaaacagt gacactgtgg gttggtcttg gccagacggt
  78      1381 gctgagttgc catttaccat tgacaagtaa
  79 //