t/data/MmCT

   1 Codon usage table
   2
   3 Pan troglodytes [gbpri]  325  CDS's
   4
   5 AmAcid   Codon             Number       /1000    Fraction
   6
   7 Pro      CCC              2351.00       22.55        0.41
   8 Pro      CCT              1234.00       11.84        0.22
   9 Pro      CCA              1158.00       11.11        0.20
  10 Pro      CCG               923.00        8.85        0.16
  11
  12 Leu      CTC              2553.00       24.49        0.24
  13 Leu      CTT               985.00        9.45        0.09
  14 Leu      CTA               802.00        7.69        0.08
  15 Leu      CTG              4997.00       47.93        0.48
  16
  17 His      CAC              1745.00       16.74        0.63
  18 His      CAT              1041.00        9.99        0.37
  19 Gln      CAA               925.00        8.87        0.17
  20 Gln      CAG              4576.00       43.90        0.83
  21
  22 Arg      CGC              1580.00       15.16        0.24
  23 Arg      CGT               397.00        3.81        0.06
  24 Arg      CGA               592.00        5.68        0.09
  25 Arg      CGG              1208.00       11.59        0.19
  26
  27 Ser      TCC              2158.00       20.70        0.27
  28 Ser      TCT              1651.00       15.84        0.21
  29 Ser      TCA               923.00        8.85        0.12
  30 Ser      TCG               417.00        4.00        0.05
  31
  32 Phe      TTC              2447.00       23.47        0.70
  33 Phe      TTT              1025.00        9.83        0.30
  34 Leu      TTA               423.00        4.06        0.04
  35 Leu      TTG               733.00        7.03        0.07
  36
  37 Tyr      TAC              2585.00       24.80        0.69
  38 Tyr      TAT              1153.00       11.06        0.31
  39 Ter      TAA                68.00        0.65        0.17
  40 Ter      TAG                69.00        0.66        0.17
  41
  42 Cys      TGC              1448.00       13.89        0.63
  43 Cys      TGT               851.00        8.16        0.37
  44 Ter      TGA               275.00        2.64        0.67
  45 Trp      TGG              2178.00       20.89        1.00
  46
  47 Thr      ACC              3341.00       32.05        0.50
  48 Thr      ACT              1121.00       10.75        0.17
  49 Thr      ACA              1452.00       13.93        0.22
  50 Thr      ACG               821.00        7.88        0.12
  51
  52 Ile      ATC              2742.00       26.30        0.62
  53 Ile      ATT              1065.00       10.22        0.24
  54 Ile      ATA               643.00        6.17        0.14
  55 Met      ATG              2152.00       20.64        1.00
  56
  57 Asn      AAC              1941.00       18.62        0.67
  58 Asn      AAT               949.00        9.10        0.33
  59 Lys      AAA              1276.00       12.24        0.32
  60 Lys      AAG              2707.00       25.97        0.68
  61
  62 Ser      AGC              1872.00       17.96        0.24
  63 Ser      AGT               828.00        7.94        0.11
  64 Arg      AGA              1250.00       11.99        0.19
  65 Arg      AGG              1467.00       14.07        0.23
  66
  67 Ala      GCC              3337.00       32.01        0.39
  68 Ala      GCT              2211.00       21.21        0.26
  69 Ala      GCA              1374.00       13.18        0.16
  70 Ala      GCG              1671.00       16.03        0.19
  71
  72 Val      GTC              1610.00       15.44        0.24
  73 Val      GTT               774.00        7.42        0.12
  74 Val      GTA               397.00        3.81        0.06
  75 Val      GTG              3873.00       37.15        0.58
  76
  77 Asp      GAC              3294.00       31.60        0.70
  78 Asp      GAT              1427.00       13.69        0.30
  79 Glu      GAA              1326.00       12.72        0.22
  80 Glu      GAG              4666.00       44.76        0.78
  81
  82 Gly      GGC              2639.00       25.31        0.37
  83 Gly      GGT               782.00        7.50        0.11
  84 Gly      GGA              1562.00       14.98        0.22
  85 Gly      GGG              2206.00       21.16        0.31
  86
  87
  88
  89 Coding GC 57.49%
  90 1st letter GC 57.76%
  91 2nd letter GC 45.35%
  92 3rd letter GC 45.35%
  93 Genetic code 1