t/data/Treebase-chlamy-dna.nex

   1 #NEXUS
   2 [File created by TreeBASE:  12/13/00  11:58:39]
   3 [Matrix accession#: M809]
   4 BEGIN DATA;
   5 DIMENSIONS  NTAX=14 NCHAR=629;
   6
   7 [!This data set was downloaded from TreeBASE, a prototype relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, and UC Davis. Please do not remove this acknowledgment from the Nexus file.
   8 TreeBASE © 1994-2000.
   9
  10 Study reference:
  11 Coleman, A. W., L. Jaenicke, and R. C. Starr. 2001. Genetics and sexual behavior of the pheromone producer, Chlamydomonas allensworthii (Chlorophyceae). J. Phycology 37, in press.
  12
  13 Study accession number = S549
  14 Matrix accession number = M809
  15 ]
  16 FORMAT DATATYPE = DNA MISSING = - GAP = # INTERLEAVE  ;
  17 MATRIX
  18
  19 'Chlamydomonas_reinhardtii_Crein'         AATCTATCACAATCCACACCGCGAACTAACACTGTTGGCCTCCGTCTGTG-TAAAAGCA-----AACGGGCCAGGTCTGGGCGCAATGTAAAAGTTACGC
  20 'Chlamydomonas_allensworthii_Cat'         AATCTATCAATACCAACACCGAGAACCGATTCGTCTGACC-CCGTC-GTGGCGCAAGCG---ACGACGG-CGCTTGCCGATCCG----TAAATT-CGGAT
  21 'Chlamydomonas_allensworthii_21A'         AATCTATCAATACCAACACCGAGAACCAATTCGTCTGACC-CCGTC-GTGGCGCAAGCG---ACGACGG-CGCTTGCCGATCCG----TTTATT-CTGAT
  22 'Chlamydomonas_allensworthii_Neb'         AATCTATCAATACCAACACCGAGAACCGATTCGTCTGACC-CCGTC-GTGGCGCAAGCG---ACGACGG-CGCTTGCCGTTCCG----TTTATT-CGGAT
  23 'Chlamydomonas_allensworthii_Hon2'        AATCTATCAATACCAACACCGAGAACCGATTCGTCTGACC-CCGTC-GTGGCGCAAGCG---ACGACGG-CGCTTGCCGATCCG----TTTATT-CGGAT
  24 'Chlamydomonas_allensworthii_Hon9'        AATCTATCAATACCAACACCGAGAACCAATTCGTCTGACC-CTGTT-GATGCGCAAGCA---GCAACGG-CGCTTGCCGATGCG----TTAACT-CGGGT
  25 'Chlamydomonas_allensworthii_Chile'       AATCTATCAATAACAACACCGAGAACCATTTCGTCTGACC-CT-TTATAAGCCTTTGGGTTTATAACGG-CGCCTGTTGTTTGG----TTAATT-CCAAG
  26 'Chlamydomonas_allensworthii_Flam'        AATCTATCAATAACAACACCGAGAACCATTTCGTCTGACC-CT-TTATAAGCCTTTGGGTTTATAACGG-CGCCTGTTGTTTGG----TTAATT-CCAAG
  27 'Chlamydomonas_allensworthii_88.10'       AATCTATCAATAACAACACCGAGAACCATTTCGTCTGACC-CTTTTATAAGCCTTTGGGTTTATAACGG-CGCCTGTTGTTTGG----TTAATT-CCAAG
  28 'Chlamydomonas_allensworthii_266'         AATCTATCAATAACAACACCGAGAACCATTTCGTCTGACC-CTTTTATAAGCCTTTGGGTTTATAACGG-CGCCTGTTGTTTGG----TTAATT-CCAAG
  29 'Chlamydomonas_allensworthii_Krueger'     AATCTATCAATAACAACACCGAGAACCATTTCGTCTGACC-CTTTTATAAAC-TTCGGGTTTATAACGG-CGCCTGTTGTTTGG----TTAATT-CTAAG
  30 'Chlamydomonas_allensworthii_LCA'         AATCTATCAATACCAACACCGAGAACCATTTCGTCTGACC-CTCCTAT--GCTTTCGGG--TATAGAAG-CGCTCGGAGCCTAG----TTAATT-CTAAG
  31 'Chlamydomonas_allensworthii_LCH'         AATCTATCAATACCAACACCGAGAACCATTTCGTCTGACC-CTTCTAT--GCTTTCGGG--TATAGAGG-CGCTCGTTGCCTAG----TTAATT-CTAAG
  32 'Chlamydomonas_allensworthii_LCN'         AATCTATCAATACCAACACCGAGAACCATTTCGTCTGACC-CTTCTAT--GCTTTCGGG--TATAGAGG-CGCTTGGAGCCTAG----TTAATT-CTAAG
  33
  34
  35 'Chlamydomonas_reinhardtii_Crein'         CTGGCCTGGGT------TGCCGCAA------GGCATCGGTCTCTTATACTAACCAACCAACACCAAACCAAAACTAAATTAAAACCGAGTATCTAGCTTA
  36 'Chlamydomonas_allensworthii_Cat'         CGGCGATCGGGCTCCGGGGCCTCAAAACCCTAGGGTCGGTCTCT----GTCCAACAACAACACCAAACCAATACCTCTAACTAAAC-TGCATTCGGCTC-
  37 'Chlamydomonas_allensworthii_21A'         CGGCGATCGGGCTCCGGGGCCTCAAAACCCTAGGGTCGGTCTCT----GTCCAACAACAACACCAAACCAATACCTCTAACTAAAC-TGCATTCGGCTC-
  38 'Chlamydomonas_allensworthii_Neb'         CGGCGATCGGGCTCCGGGGCCTCAAAACCCTAGGGTCGGTCTAT----GTCCAACAACAACACCAAACCAATACCTCTAACTAAAC-TGCATTCGGCTC-
  39 'Chlamydomonas_allensworthii_Hon2'        CGGCGATCGGGCTCCGGGGCCTCAAAACCCTAGGGTCGGTCTAT----GTCCAACAACAACACCAAACCAATACCTCTAACTAAAC-TGCATTCGGCTC-
  40 'Chlamydomonas_allensworthii_Hon9'        CGGTGATCGGGCTCTAGGGCTTAACAACCCTAGGGTCGGTCCCT----GTCCAACAACAACACCAAACCAATACCTCTAACTAAAC-TGCATTCGGCTC-
  41 'Chlamydomonas_allensworthii_Chile'       CACCAGGTGGGCTC---GGCTT-------GCCGAGTTGGTCTCT----GTCCAACAACAACACCAAACCAATAATTCTAATTATCC-TGCATTCGGCAT-
  42 'Chlamydomonas_allensworthii_Flam'        CACCAGGTGGGCTC---GGCTT-------GCCGAGTTGGTCTCT----GTCCAACAACAACACCAAACCAATAATTCTAATTATCC-TGCATTCGGCAT-
  43 'Chlamydomonas_allensworthii_88.10'       CACCAGGTGGGCTC---GGCTT-------GCCGAGTTGGTCTCT----GTCCAACAACAACACCAAACCAATAATTCTAATTATCC-TGCATTCGGCAT-
  44 'Chlamydomonas_allensworthii_266'         CACCAGGTGGGCTC---GGCTT-------GCCGAGTTGGTCTCT----GTCCAACAACAACACCAAACCAATAATTCTAATTATCC-TGCATTCGGCAT-
  45 'Chlamydomonas_allensworthii_Krueger'     CACCAGGTGGGCTC---GGCTT-------GCCGAGTTGGTCTCT----GTCCAACAACAACACCAAACCAATAATTCTAATTATCC-TGCATTCGGCAT-
  46 'Chlamydomonas_allensworthii_LCA'         CTCCGGGTGGGCTC---GGCTTC-----GGCTGGGTTGGTTCCT----GTCCAACAACAACACCAAACAAATAATTCTAAATAATC-TGCATTCGGCA--
  47 'Chlamydomonas_allensworthii_LCH'         CTCCGGGTGGGCTC---AGCTTC-----GGCTGGGTTGGTTCTT----GTCCAACAACAACACCAAACAAATAATTCTAAATAATC-TGCATTCGGCA--
  48 'Chlamydomonas_allensworthii_LCN'         CTCCGGGTGGGCTC---GGCTTC-----GGCTGGGTTGGTCCTT----GTCCAACAACAACACCAAACAAATAATTCTAAATAATC-TGCATTCGGCA--
  49
  50
  51 'Chlamydomonas_reinhardtii_Crein'         GAGCTAGTGCTCACTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  52 'Chlamydomonas_allensworthii_Cat'         -AGCCGGTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  53 'Chlamydomonas_allensworthii_21A'         -AGCCGGTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  54 'Chlamydomonas_allensworthii_Neb'         -AGCCGGTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  55 'Chlamydomonas_allensworthii_Hon2'        -AGCCGGTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  56 'Chlamydomonas_allensworthii_Hon9'        -AGCCGGTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  57 'Chlamydomonas_allensworthii_Chile'       -AGCCGATGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  58 'Chlamydomonas_allensworthii_Flam'        -AGCCGATGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  59 'Chlamydomonas_allensworthii_88.10'       -AGCCGATGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  60 'Chlamydomonas_allensworthii_266'         -AGCCGATGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  61 'Chlamydomonas_allensworthii_Krueger'     -AGCCGATGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  62 'Chlamydomonas_allensworthii_LCA'         -ATCGGCTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  63 'Chlamydomonas_allensworthii_LCH'         -ATCGGCTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  64 'Chlamydomonas_allensworthii_LCN'         -ATCGGCTGC-ATCTAACCAAGA-CAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGC
  65
  66
  67 'Chlamydomonas_reinhardtii_Crein'         AGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCCCTA-CT
  68 'Chlamydomonas_allensworthii_Cat'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  69 'Chlamydomonas_allensworthii_21A'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  70 'Chlamydomonas_allensworthii_Neb'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  71 'Chlamydomonas_allensworthii_Hon2'        AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  72 'Chlamydomonas_allensworthii_Hon9'        AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  73 'Chlamydomonas_allensworthii_Chile'       AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  74 'Chlamydomonas_allensworthii_Flam'        AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  75 'Chlamydomonas_allensworthii_88.10'       AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  76 'Chlamydomonas_allensworthii_266'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  77 'Chlamydomonas_allensworthii_Krueger'     AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  78 'Chlamydomonas_allensworthii_LCA'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATA
  79 'Chlamydomonas_allensworthii_LCH'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATT
  80 'Chlamydomonas_allensworthii_LCN'         AGAAAACCGTGAACCATCGAATCTTTGAACGCATATTGCGCTCGACCCTTCGGGGAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCCAATA
  81
  82
  83 'Chlamydomonas_reinhardtii_Crein'         CCAACATACACTTGTGTGTTTGGAGCAAGAGCGGACCTGGCTGTCTCGGTGTTTGATTTTCGGATCAGACGCCGGGTCAGCTGAAGTACAGAGGTTGATG
  84 'Chlamydomonas_allensworthii_Cat'         CCACA--------------------TTGGAACGGATCTGGCAGTCTCAGTCTGC------------AAAGACTGGGTCTGCTGAAGTGCAGAGGTTGATG
  85 'Chlamydomonas_allensworthii_21A'         CCACA--------------------TTGGAACGGATCTGGCAGTCTCAGTTTGC------------AAAGACTGGGTCTGCTGAAGTGCAGAGGTTGATG
  86 'Chlamydomonas_allensworthii_Neb'         CCACA--------------------TTGGAACGGATCTGGCAGTCTCAGTTTGC------------AAAGACTGGGTCTGCTGAAGTGCAGAGGTTGATG
  87 'Chlamydomonas_allensworthii_Hon2'        CCACA--------------------TTGGAACGGATCTGGCAGTCTCAGTTTGC------------AAAAACTGGGTCTGCTGAAGTGCAGAGGTTGATG
  88 'Chlamydomonas_allensworthii_Hon9'        CCACA--------------------TTGGAACGGATCTGGCAGTCTCGGTTTGC------------AAAAACCGGGTCTGCTGAAGTGCAGAGGTTGATG
  89 'Chlamydomonas_allensworthii_Chile'       CCCCAA-------------------TTGGAACGGATCTGGCAGTCTCAGCTTTTTC--------AATAGAGCTGGGCCTGCTGAAGTGCAGAGGTTGATG
  90 'Chlamydomonas_allensworthii_Flam'        CCCCAA-------------------TTGGAACGGATCTGGCAGTCTCAGCTTTTTC--------AATAGAGCTGGGTCTGCTGAAGTGCAGAGGTTGATG
  91 'Chlamydomonas_allensworthii_88.10'       CCCCAA-------------------TTGGATCGGATCTGGCAGTCTCAGCTTTTTC--------AATAGAGCTGGGTCTGCTGAAGTGCAGAGGTTGATG
  92 'Chlamydomonas_allensworthii_266'         CCCCAA-------------------TTGGAACGGATCTGGCAGTCTCAGCTTTTTC--------AATAGAGCTGGGTCTGCTGAAGTGCAGAGGTTGATG
  93 'Chlamydomonas_allensworthii_Krueger'     CCCCAA-------------------TTGGAACGGATCTGGCAGTCTCAGCTTTTTC--------AATAGAGCTGGGTCTGCTGAAGTGCAGAGGTTGATG
  94 'Chlamydomonas_allensworthii_LCA'         CCACA--------------------TTGGAACGGACCTGGCAGTCTCAGTTCTTTG--------ATTAGAGCTGGGTCTGCTGAAGTGCAGAGATTGATG
  95 'Chlamydomonas_allensworthii_LCH'         CCACA--------------------TTGGAACGGACCTGGCAGTCTCAGTTCTTTT--------AATAGAGCTGGGTCTGCTGAAGTGCAGAGATTGATG
  96 'Chlamydomonas_allensworthii_LCN'         CCACA--------------------TTGGAACGGACCTGGCAGTCTCAGTTCTTTG--------ATTAGAGCTGGGTCTGCTGAAGTGCAGAGATTGATG
  97
  98
  99 'Chlamydomonas_reinhardtii_Crein'         CATGGACCCGCTTATGGGCCTCTACTGGGTAGGCAACTCGTTGCTAATGCTTTAGTAGATGGCTTGGAGCTGTGCTTGTCGACCCAAACCAGGAACTTTG
 100 'Chlamydomonas_allensworthii_Cat'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACT-
 101 'Chlamydomonas_allensworthii_21A'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 102 'Chlamydomonas_allensworthii_Neb'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACT-
 103 'Chlamydomonas_allensworthii_Hon2'        TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACT-
 104 'Chlamydomonas_allensworthii_Hon9'        TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACA-
 105 'Chlamydomonas_allensworthii_Chile'       TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 106 'Chlamydomonas_allensworthii_Flam'        TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 107 'Chlamydomonas_allensworthii_88.10'       TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 108 'Chlamydomonas_allensworthii_266'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 109 'Chlamydomonas_allensworthii_Krueger'     TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGACCCTCAACAGGAAAACC-
 110 'Chlamydomonas_allensworthii_LCA'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGATCCTCAACAGGAAAAC--
 111 'Chlamydomonas_allensworthii_LCH'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGATCCTCAACAGGAAAAC--
 112 'Chlamydomonas_allensworthii_LCN'         TA-GGACCCGC-TATGGGCCGCAACTGGGTAGGCA-CTCGT-GCTAATTCTT-AGTTGTTGGCTTGGGACT-TGCT-GTCGATCCTCAACAGGAAAAC--
 113
 114
 115 'Chlamydomonas_reinhardtii_Crein'         GCCCTGTGCCGAAGCAAACCCCTATTTTC
 116 'Chlamydomonas_allensworthii_Cat'         ---------------ATTAACCTATTTTC
 117 'Chlamydomonas_allensworthii_21A'         ---------------ATTAACCTATTTTC
 118 'Chlamydomonas_allensworthii_Neb'         ---------------ATTAACCTATTTTC
 119 'Chlamydomonas_allensworthii_Hon2'        ---------------ATTAACCTATTTTC
 120 'Chlamydomonas_allensworthii_Hon9'        ---------------ATTAACCTATTTTC
 121 'Chlamydomonas_allensworthii_Chile'       ---------------ATTAACCTATTTTC
 122 'Chlamydomonas_allensworthii_Flam'        ---------------ATTAACCTATTTTC
 123 'Chlamydomonas_allensworthii_88.10'       ---------------ATTAACCTATTTTC
 124 'Chlamydomonas_allensworthii_266'         ---------------ATTAACCTATTTTC
 125 'Chlamydomonas_allensworthii_Krueger'     ---------------ATTAACCTATTTTC
 126 'Chlamydomonas_allensworthii_LCA'         ---------------ATTAACCTATTTTC
 127 'Chlamydomonas_allensworthii_LCH'         ---------------ATTAACCTATTTTC
 128 'Chlamydomonas_allensworthii_LCN'         ---------------ATTAACCTATTTTC
 129 ;
 130 END;
 131
 132 BEGIN CODONS;
 133 CODONPOSSET * CodonPositions =
 134  N: 1 - 629 ;
 135  CODESET * UNTITLED = Universal: all ;
 136  END;
 137 BEGIN ASSUMPTIONS;
 138 OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ;
 139  END;
 140 BEGIN TREEBASE;
 141 END;
 142
 143 BEGIN TREES;
 144
 145 [! 1 trees. TreeBASE accession#: Tree1641 ]
 146         TRANSLATE
 147                 1       'Chlamydomonas_allensworthii_Krueger',
 148                 2       'Chlamydomonas_allensworthii_88.10',
 149                 3       'Chlamydomonas_allensworthii_Chile',
 150                 4       'Chlamydomonas_allensworthii_Flam',
 151                 5       'Chlamydomonas_allensworthii_Hon9',
 152                 6       'Chlamydomonas_allensworthii_Hon2',
 153                 7       'Chlamydomonas_allensworthii_LCN',
 154                 8       'Chlamydomonas_allensworthii_LCH',
 155                 9       'Chlamydomonas_allensworthii_LCA',
 156                 10      'Chlamydomonas_allensworthii_266',
 157                 11      'Chlamydomonas_allensworthii_Neb',
 158                 12      'Chlamydomonas_allensworthii_21A',
 159                 13      'Chlamydomonas_allensworthii_Cat',
 160                 14      'Chlamydomonas_reinhardtii_Crein',
 161                 15      'Chlamydomonas_allensworthii',
 162                 16      'Chlamydomonas',
 163         ;
 164         TREE 'Fig._2' =  [&R] (((((7,9),8),(1,(10,2,4,3))),(5,((6,11),12,13))),14);
 165
 166
 167 END;