t/data/phipsi.out

   1 BLASTP 2.0.14 [Jun-29-2000]
   2
   3
   4 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
   5 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
   6 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
   7 programs",  Nucleic Acids Res. 25:3389-3402.
   8
   9 Query= CYS1_DICDI
  10          (351 letters)
  11
  12 Database: /home/peter/blast/data/swissprot
  13            88,780 sequences; 31,984,247 total letters
  14
  15 Searching......................................................................................................................................................
  16 3 occurrence(s) of pattern in query
  17   CYS1_DICDI; PATTERN.\r
  18  pattern P-E-E-Q at position 23 of query sequence
  19 effective database length=3.2e+07
  20  pattern probability=8.9e-06
  21 lengthXprobability=2.8e+02
  22
  23 Number of occurrences of pattern in the database is 349
  24   CYS1_DICDI; PATTERN.\r
  25  pattern P-E-E-Q at position 120 of query sequence
  26 effective database length=3.2e+07
  27  pattern probability=8.9e-06
  28 lengthXprobability=2.8e+02
  29
  30 Number of occurrences of pattern in the database is 349
  31   CYS1_DICDI; PATTERN.\r
  32  pattern P-E-E-Q at position 237 of query sequence
  33 effective database length=3.2e+07
  34  pattern probability=8.9e-06
  35 lengthXprobability=2.8e+02
  36
  37 Number of occurrences of pattern in the database is 349
  38 done
  39
  40
  41 Results from round 1
  42
  43                                                                    Score     E
  44                                                                    (bits)  Value
  45
  46 Significant matches for pattern occurrence 1 at position 23
  47
  48
  49 sp|P04988|CYS1_DICDI CYSTEINE PROTEINASE 1 PRECURSOR                  688  0.0
  50 sp|P30957|RYNC_RABIT RYANODINE RECEPTOR, CARDIAC MUSCLE                 8  4.8
  51 sp|Q08862|GTC_RABIT GLUTATHIONE S-TRANSFERASE YC (ALPHA II) (GST...     7  6.0
  52 sp|O95801|TTC4_HUMAN TETRATRICOPEPTIDE REPEAT PROTEIN 4                 7  7.6
  53 sp|P36114|YKZ8_YEAST HYPOTHETICAL 81.8 KDA PROTEIN IN YPT52-DBP7...     7  9.6
  54
  55
  56 Significant matches for pattern occurrence 2 at position 120
  57
  58
  59 sp|P11559|MCRA_METVO METHYL-COENZYME M REDUCTASE ALPHA SUBUNIT         13  0.13
  60 sp|Q49605|MCRA_METKA METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT...    11  0.43
  61 sp|P81901|FER_PYRIS FERREDOXIN (SEVEN-IRON FERREDOXIN)                 11  0.55
  62 sp|Q58256|MCRX_METJA METHYL-COENZYME M REDUCTASE II ALPHA SUBUNI...    10  1.1
  63 sp|P53203|YG14_YEAST HYPOTHETICAL 52.9 KD PROTEIN IN ERP6-TFG2 I...     8  3.0
  64 sp|P55002|MGP1_MOUSE MICROFIBRIL-ASSOCIATED GLYCOPROTEIN PRECURS...     7  6.0
  65 sp|Q06234|ASH1_XENLA ACHAETE-SCUTE HOMOLOG 1                            7  7.6
  66 sp|P20918|PLMN_MOUSE PLASMINOGEN PRECURSOR [CONTAINS: ANGIOSTATIN]      7  7.6
  67
  68
  69 Significant matches for pattern occurrence 3 at position 237
  70
  71
  72 sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, ...     9  1.4
  73 sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, ...     9  1.4
  74 sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI...     8  4.8
  75 sp|P32767|PDR6_YEAST PLEIOTROPIC DRUG RESISTANCE REGULATORY PROT...     7  6.0
  76 sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MI...     7  9.6
  77
  78
  79 Significant alignments for pattern occurrence 1 at position 23
  80
  81 >sp|P04988|CYS1_DICDI CYSTEINE PROTEINASE 1 PRECURSOR
  82           Length = 343
  83
  84  Score =  688 bits (1789), Expect = 0.0
  85  Identities = 343/351 (97%), Positives = 343/351 (97%), Gaps = 8/351 (2%)
  86
  87 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
  88 pattern 23                        ****
  89             MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE
  90 Sbjct:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
  91
  92 Query:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPP 120
  93 pattern 120                                                            *
  94             ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP
  95 Sbjct:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP- 119
  96
  97 Query:  121 EEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 180
  98 pattern 121 ***
  99                TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE
 100 Sbjct:  120 ---TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 176
 101
 102 Query:  181 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ 240
 103 pattern 237                                                         ****
 104             CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG
 105 Sbjct:  177 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG---- 232
 106
 107 Query:  241 AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG 300
 108             AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG
 109 Sbjct:  233 AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG 292
 110
 111 Query:  301 YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
 112             YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII
 113 Sbjct:  293 YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343
 114
 115
 116 >sp|P30957|RYNC_RABIT RYANODINE RECEPTOR, CARDIAC MUSCLE
 117           Length = 4969
 118
 119  Score =  7.8 bits (25), Expect = 4.8
 120  Identities = 14/39 (35%), Positives = 19/39 (47%)
 121
 122 Query:  23   PEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEE 61
 123 pattern 23   ****
 124              PEEQ +F E + K  +K   EE     E  +   G+ EE
 125 Sbjct:  4414 PEEQEKFQEQKTKEEEKEEKEETKSEPEKAEGEDGEKEE 4452
 126
 127
 128 >sp|Q08862|GTC_RABIT GLUTATHIONE S-TRANSFERASE YC (ALPHA II) (GST CLASS-ALPHA)
 129           Length = 221
 130
 131  Score =  7.4 bits (24), Expect = 6.0
 132  Identities = 19/67 (28%), Positives = 35/67 (51%), Gaps = 12/67 (17%)
 133
 134 Query:  21  IPPEEQ-SQFLEFQDKFNKKY---------SH-EEYLERFEIFKSNLGKIEEL-NLIAIN 68
 135 pattern 23    ****
 136             +PPEEQ ++  + +DK   +Y         SH ++YL   ++ K+++  +E L N+  +N
 137 Sbjct:  112 LPPEEQEAKLAQIKDKAKNRYFPAFEKVLKSHGQDYLVGNKLSKADILLVELLYNVEELN 171
 138
 139 Query:  69  HKADTKF 75
 140               A   F
 141 Sbjct:  172 PGATASF 178
 142
 143
 144 >sp|O95801|TTC4_HUMAN TETRATRICOPEPTIDE REPEAT PROTEIN 4
 145           Length = 356
 146
 147  Score =  7.1 bits (23), Expect = 7.6
 148  Identities = 14/67 (20%), Positives = 32/67 (46%), Gaps = 5/67 (7%)
 149
 150 Query:  23  PEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGK---IEELNLIAINHKADTKFGVNK 79
 151 pattern 23  ****
 152             PEEQ++   ++D+ N  +  ++Y +    +   L K     +LN +   ++A  ++ +
 153 Sbjct:  75  PEEQAK--TYKDEGNDYFKEKDYKKAVISYTEGLKKKCADPDLNAVLYTNRAAAQYYLGN 132
 154
 155 Query:  80  FADLSSD 86
 156             F    +D
 157 Sbjct:  133 FRSALND 139
 158
 159
 160 >sp|P36114|YKZ8_YEAST HYPOTHETICAL 81.8 KDA PROTEIN IN YPT52-DBP7 INTERGENIC REGION
 161           Length = 725
 162
 163  Score =  6.8 bits (22), Expect = 9.6
 164  Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 21/99 (21%)
 165
 166 Query:  21  IPPEEQ--SQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVN 78
 167 pattern 23    ****
 168             + PEEQ     L+F ++      H    ER  +  +++G    +N      +   + G+
 169 Sbjct:  213 LTPEEQKDKDLLQFAEQI-----HSMRTER--LSGAHIGNSPAIN------RLRGELGLQ 259
 170
 171 Query:  79  KFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINS 117
 172                DL  +E  ++       + +DD+ ++    DEF++S
 173 Sbjct:  260 AMEDLPEEEITDH------KVLSDDIDLSQATIDEFVHS 292
 174
 175
 176
 177 Significant alignments for pattern occurrence 2 at position 120
 178
 179 >sp|P11559|MCRA_METVO METHYL-COENZYME M REDUCTASE ALPHA SUBUNIT
 180           Length = 555
 181
 182  Score = 13.0 bits (40), Expect = 0.13
 183  Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 184
 185 Query:  99  IFTDDLPVADYLDDEF---INSIPPEEQ 123
 186 pattern 120                         ****
 187             IFT D  +AD LDD F   IN + PEEQ
 188 Sbjct:  170 IFTGDDELADELDDRFVIDINKLFPEEQ 197
 189
 190
 191 >sp|Q49605|MCRA_METKA METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (MCR I ALPHA)
 192           Length = 553
 193
 194  Score = 11.2 bits (35), Expect = 0.43
 195  Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 196
 197 Query:  99  IFTDDLPVADYLDDEFINSIP---PEEQ 123
 198 pattern 120                         ****
 199             I T DL +AD +DD+F+  I    PEEQ
 200 Sbjct:  168 IITGDLELADEIDDKFLIDIEKLFPEEQ 195
 201
 202
 203 >sp|P81901|FER_PYRIS FERREDOXIN (SEVEN-IRON FERREDOXIN)
 204           Length = 101
 205
 206  Score = 10.9 bits (34), Expect = 0.55
 207  Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 208
 209 Query:  114 FINSIPPEEQTAF-DWRTRGAVT 135
 210 pattern 120       ****
 211             F  S+ PEEQ AF +W+TR  +T
 212 Sbjct:  78  FGKSLTPEEQRAFEEWKTRYGIT 100
 213
 214
 215 >sp|Q58256|MCRX_METJA METHYL-COENZYME M REDUCTASE II ALPHA SUBUNIT (MCR II ALPHA)
 216           Length = 553
 217
 218  Score =  9.8 bits (31), Expect = 1.1
 219  Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 220
 221 Query:  99  IFTDDLPVADYLDDEF---INSIPPEEQ 123
 222 pattern 120                         ****
 223             IFT D  +AD +D  F   IN + PEEQ
 224 Sbjct:  168 IFTGDDELADEIDKRFLIDINKLFPEEQ 195
 225
 226
 227 >sp|P53203|YG14_YEAST HYPOTHETICAL 52.9 KD PROTEIN IN ERP6-TFG2 INTERGENIC REGION
 228           Length = 462
 229
 230  Score =  8.5 bits (27), Expect = 3.0
 231  Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 9/39 (23%)
 232
 233 Query:  112 DEFINSIP-------PEEQT--AFDWRTRGAVTPVKNQG 141
 234 pattern 120                ****
 235             DEF+N+ P       PEEQ+  A++W  +  +  + N G
 236 Sbjct:  308 DEFLNTSPSPEVFTLPEEQSGMAWEWHDKDWMLDLTNDG 346
 237
 238
 239 >sp|P55002|MGP1_MOUSE MICROFIBRIL-ASSOCIATED GLYCOPROTEIN PRECURSOR (MAGP) (MAGP-1)
 240           Length = 183
 241
 242  Score =  7.4 bits (24), Expect = 6.0
 243  Identities = 11/37 (29%), Positives = 18/37 (47%)
 244
 245 Query:  100 FTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTP 136
 246 pattern 120                     ****
 247             + D +  ADY D + ++   PEEQ     + +  V P
 248 Sbjct:  37  YGDQIDNADYYDYQEVSPRTPEEQFQSQQQVQQEVIP 73
 249
 250
 251 >sp|Q06234|ASH1_XENLA ACHAETE-SCUTE HOMOLOG 1
 252           Length = 199
 253
 254  Score =  7.1 bits (23), Expect = 7.6
 255  Identities = 11/27 (40%), Positives = 15/27 (54%), Gaps = 1/27 (3%)
 256
 257 Query:  105 PVADYLDDE-FINSIPPEEQTAFDWRT 130
 258 pattern 120                 ****
 259             PV+ Y  DE   + + PEEQ   D+ T
 260 Sbjct:  171 PVSSYSSDEGSYDPLSPEEQELLDFTT 197
 261
 262
 263 >sp|P20918|PLMN_MOUSE PLASMINOGEN PRECURSOR [CONTAINS: ANGIOSTATIN]
 264           Length = 812
 265
 266  Score =  7.1 bits (23), Expect = 7.6
 267  Identities = 8/13 (61%), Positives = 11/13 (84%)
 268
 269 Query:  112 DEFINSIPPEEQT 124
 270 pattern 120         ****
 271             D+  +S+PPEEQT
 272 Sbjct:  359 DQSDSSVPPEEQT 371
 273
 274
 275
 276 Significant alignments for pattern occurrence 3 at position 237
 277
 278 >sp|P49362|GCSB_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] B, MITOCHONDRIAL PRECURSOR
 279             (GLYCINE DECARBOXYLASE B) (GLYCINE CLEAVAGE SYSTEM
 280             P-PROTEIN B)
 281           Length = 1034
 282
 283  Score =  9.5 bits (30), Expect = 1.4
 284  Identities = 21/79 (26%), Positives = 39/79 (48%), Gaps = 13/79 (16%)
 285
 286 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 287 pattern 237       ****
 288             NSA   PEEQ K++ F   P  +++    I +T P +I  D++++  +  G+ +     +
 289 Sbjct:  80  NSAT--PEEQTKMAEFVGFPNLDSL----IDATVPKSIRLDSMKYSKFDEGLTESQMIAH 133
 290
 291 Query:  291 SLDHGILIVGYSAKNTIFR 309
 292               D        ++KN IF+
 293 Sbjct:  134 MQD-------LASKNKIFK 145
 294
 295
 296 >sp|P49361|GCSA_FLAPR GLYCINE DEHYDROGENASE [DECARBOXYLATING] A, MITOCHONDRIAL PRECURSOR
 297             (GLYCINE DECARBOXYLASE A) (GLYCINE CLEAVAGE SYSTEM
 298             P-PROTEIN A)
 299           Length = 1037
 300
 301  Score =  9.5 bits (30), Expect = 1.4
 302  Identities = 21/79 (26%), Positives = 39/79 (48%), Gaps = 13/79 (16%)
 303
 304 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 305 pattern 237       ****
 306             NSA   PEEQ K++ F   P  +++    I +T P +I  D++++  +  G+ +     +
 307 Sbjct:  83  NSAT--PEEQTKMAEFVGFPNLDSL----IDATVPKSIRLDSMKYSKFDEGLTESQMIAH 136
 308
 309 Query:  291 SLDHGILIVGYSAKNTIFR 309
 310               D        ++KN IF+
 311 Sbjct:  137 MQD-------LASKNKIFK 148
 312
 313
 314 >sp|O49852|GCSP_FLATR GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
 315             (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
 316             P-PROTEIN)
 317           Length = 1034
 318
 319  Score =  7.8 bits (25), Expect = 4.8
 320  Identities = 21/79 (26%), Positives = 38/79 (47%), Gaps = 13/79 (16%)
 321
 322 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 323 pattern 237       ****
 324             NSA   PEEQ K++ F      +++    I +T P AI  D++++  +  G+ +     +
 325 Sbjct:  80  NSAT--PEEQTKMAEFVGFSNLDSL----IDATVPKAIRLDSMKYSKFDEGLTESQMIAH 133
 326
 327 Query:  291 SLDHGILIVGYSAKNTIFR 309
 328               D        ++KN IF+
 329 Sbjct:  134 MQD-------LASKNKIFK 145
 330
 331
 332 >sp|P32767|PDR6_YEAST PLEIOTROPIC DRUG RESISTANCE REGULATORY PROTEIN 6
 333           Length = 1081
 334
 335  Score =  7.4 bits (24), Expect = 6.0
 336  Identities = 25/93 (26%), Positives = 37/93 (38%), Gaps = 17/93 (18%)
 337
 338 Query:  159 HFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYI-IKNGGIQTESS 217
 339             +F S+N+   +S   L     E M  +      E C   L P   ++I   N  I  +S+
 340 Sbjct:  642 NFTSKNEQEKISNDKL-----EVMVIKTVSTLCETCREELTPYLMHFISFLNTVIMPDSN 696
 341
 342 Query:  218 YPYTAETG--------TQCNFNSANIGPEEQAK 242
 343 pattern 237                            ****
 344               +   T          QC  ++   GPEEQAK
 345 Sbjct:  697 VSHFTRTKLVRSIGYVVQCQVSN---GPEEQAK 726
 346
 347
 348 >sp|O49850|GCSP_FLAAN GLYCINE DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
 349             (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE SYSTEM
 350             P-PROTEIN)
 351           Length = 1034
 352
 353  Score =  6.8 bits (22), Expect = 9.6
 354  Identities = 20/79 (25%), Positives = 38/79 (47%), Gaps = 13/79 (16%)
 355
 356 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 357 pattern 237       ****
 358             NSA   PEEQ K++ F      +++    I +T P +I  D++++  +  G+ +     +
 359 Sbjct:  80  NSAT--PEEQTKMAEFVGFSNLDSL----IDATVPKSIRLDSMKYSKFDEGLTESQMIAH 133
 360
 361 Query:  291 SLDHGILIVGYSAKNTIFR 309
 362               D        ++KN IF+
 363 Sbjct:  134 MQD-------LASKNKIFK 145
 364
 365
 366 Searching..................................................done
 367
 368
 369 Results from round 2
 370
 371
 372                                                                    Score     E
 373 Sequences producing significant alignments:                        (bits)  Value
 374 Sequences used in model and found again:
 375
 376 Sequences not found previously or not previously below threshold:
 377
 378 sp|P04988|CYS1_DICDI CYSTEINE PROTEINASE 1 PRECURSOR                  709  0.0
 379 sp|P43295|A494_ARATH PROBABLE CYSTEINE PROTEINASE A494 PRECURSOR      273  4e-73
 380 sp|P25804|CYSP_PEA CYSTEINE PROTEINASE 15A PRECURSOR (TURGOR-RES...   270  2e-72
 381 sp|P43296|RD19_ARATH CYSTEINE PROTEINASE RD19A PRECURSOR              266  6e-71
 382 sp|Q10716|CYS1_MAIZE CYSTEINE PROTEINASE 1 PRECURSOR                  252  6e-67
 383 sp|P04989|CYS2_DICDI CYSTEINE PROTEINASE 2 PRECURSOR (PRESTALK C...   250  2e-66
 384 sp|P54640|CYS5_DICDI CYSTEINE PROTEINASE 5 PRECURSOR                  238  1e-62
 385 sp|P14658|CYSP_TRYBB CYSTEINE PROTEINASE PRECURSOR                    236  4e-62
 386 sp|Q26534|CATL_SCHMA CATHEPSIN L PRECURSOR (SMCL1)                    233  3e-61
 387 sp|P35591|CYS1_LEIPI CYSTEINE PROTEINASE 1 PRECURSOR (AMASTIGOTE...   233  3e-61
 388 sp|P25775|LCPA_LEIME CYSTEINE PROTEINASE A PRECURSOR                  231  1e-60
 389 sp|P13277|CYS1_HOMAM DIGESTIVE CYSTEINE PROTEINASE 1 PRECURSOR        221  1e-57
 390 sp|P25779|CYSP_TRYCR CRUZIPAIN PRECURSOR (MAJOR CYSTEINE PROTEIN...   221  2e-57
 391 sp|P41721|CATV_NPVBM VIRAL CATHEPSIN (V-CATH)                         216  5e-56
 392 sp|P25782|CYS2_HOMAM DIGESTIVE CYSTEINE PROTEINASE 2 PRECURSOR        215  1e-55
 393 sp|P41715|CATV_NPVCF VIRAL CATHEPSIN (V-CATH)                         214  2e-55
 394 sp|P25784|CYS3_HOMAM DIGESTIVE CYSTEINE PROTEINASE 3 PRECURSOR        214  2e-55
 395 sp|P07154|CATL_RAT CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTEIN...   212  7e-55
 396 sp|P06797|CATL_MOUSE CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTE...   212  1e-54
 397 sp|P12412|CYSP_VIGMU VIGNAIN PRECURSOR (BEAN ENDOPEPTIDASE) (CYS...   209  8e-54
 398 sp|P25783|CATV_NPVAC VIRAL CATHEPSIN (V-CATH)                         209  8e-54
 399 sp|P25975|CATL_BOVIN CATHEPSIN L PRECURSOR                            208  1e-53
 400 sp|Q40143|CYS3_LYCES CYSTEINE PROTEINASE 3 PRECURSOR                  207  2e-53
 401 sp|Q05094|CYS2_LEIPI CYSTEINE PROTEINASE 2 PRECURSOR (AMASTIGOTE...   207  3e-53
 402 sp|P36400|LCPB_LEIME CYSTEINE PROTEINASE B PRECURSOR                  206  4e-53
 403 sp|P07711|CATL_HUMAN CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTE...   206  4e-53
 404 sp|Q28944|CATL_PIG CATHEPSIN L PRECURSOR                              206  5e-53
 405 sp|P00785|ACTN_ACTCH ACTINIDAIN PRECURSOR (ACTINIDIN)                 204  3e-52
 406 sp|P25803|CYSP_PHAVU VIGNAIN PRECURSOR (BEAN ENDOPEPTIDASE) (CYS...   203  6e-52
 407 sp|Q10991|CATL_SHEEP CATHEPSIN L                                      201  1e-51
 408 sp|P43156|CYSP_HEMSP THIOL PROTEASE SEN102 PRECURSOR                  201  2e-51
 409 sp|P54639|CYS4_DICDI CYSTEINE PROTEINASE 4 PRECURSOR                  200  3e-51
 410 sp|O60911|CATM_HUMAN CATHEPSIN L2 PRECURSOR (CATHEPSIN V)             199  7e-51
 411 sp|O10364|CATV_NPVOP VIRAL CATHEPSIN (V-CATH)                         196  5e-50
 412 sp|P25777|ORYB_ORYSA ORYZAIN BETA CHAIN PRECURSOR                     196  5e-50
 413 sp|P25776|ORYA_ORYSA ORYZAIN ALPHA CHAIN PRECURSOR                    194  2e-49
 414 sp|P43297|RD21_ARATH CYSTEINE PROTEINASE RD21A PRECURSOR              193  4e-49
 415 sp|Q10717|CYS2_MAIZE CYSTEINE PROTEINASE 2 PRECURSOR                  193  5e-49
 416 sp|P14080|PAP2_CARPA CHYMOPAPAIN PRECURSOR (PAPAYA PROTEINASE II...   192  1e-48
 417 sp|P00786|CATH_RAT CATHEPSIN H PRECURSOR (CATHEPSIN B3) (CATHEPS...   192  1e-48
 418 sp|P25251|CYS4_BRANA CYSTEINE PROTEINASE COT44 PRECURSOR              190  5e-48
 419 sp|P09668|CATH_HUMAN CATHEPSIN H PRECURSOR                            188  2e-47
 420 sp|P10056|PAP3_CARPA CARICAIN PRECURSOR (PAPAYA PROTEINASE OMEGA...   187  2e-47
 421 sp|P25778|ORYC_ORYSA ORYZAIN GAMMA CHAIN PRECURSOR                    187  2e-47
 422 sp|P15242|TES1_RAT TESTIN 1/2 PRECURSOR (CMB-22/CMB-23)               187  4e-47
 423 sp|O46427|CATH_PIG CATHEPSIN H PRECURSOR                              186  5e-47
 424 sp|P05167|ALEU_HORVU THIOL PROTEASE ALEURAIN PRECURSOR                185  9e-47
 425 sp|P43235|CATK_HUMAN CATHEPSIN K PRECURSOR (CATHEPSIN O) (CATHEP...   185  1e-46
 426 sp|P05994|PAP4_CARPA PAPAYA PROTEINASE IV PRECURSOR (PPIV) (PAPA...   184  3e-46
 427 sp|P25250|CYS2_HORVU CYSTEINE PROTEINASE EP-B 2 PRECURSOR             183  3e-46
 428 sp|P25249|CYS1_HORVU CYSTEINE PROTEINASE EP-B 1 PRECURSOR             183  5e-46
 429 sp|P43236|CATK_RABIT CATHEPSIN K PRECURSOR (OC-2 PROTEIN)             183  6e-46
 430 sp|P22895|P34_SOYBN P34 PROBABLE THIOL PROTEASE PRECURSOR             182  8e-46
 431 sp|P49935|CATH_MOUSE CATHEPSIN H PRECURSOR (CATHEPSIN B3) (CATHE...   180  5e-45
 432 sp|P55097|CATK_MOUSE CATHEPSIN K PRECURSOR                            178  2e-44
 433 sp|P56202|CATW_HUMAN CATHEPSIN W PRECURSOR (LYMPHOPAIN)               177  3e-44
 434 sp|P56203|CATW_MOUSE CATHEPSIN W PRECURSOR (LYMPHOPAIN)               176  6e-44
 435 sp|P43234|CATO_HUMAN CATHEPSIN O PRECURSOR                            173  4e-43
 436 sp|P00784|PAPA_CARPA PAPAIN PRECURSOR (PAPAYA PROTEINASE I) (PPI)     173  7e-43
 437 sp|P25774|CATS_HUMAN CATHEPSIN S PRECURSOR                            171  3e-42
 438 sp||CATL_CHICK_1 [Segment 1 of 2] CATHEPSIN L                         167  2e-41
 439 sp|P25326|CATS_BOVIN CATHEPSIN S                                      165  1e-40
 440 sp|P80884|ANAN_ANACO ANANAIN                                          161  2e-39
 441 sp|Q02765|CATS_RAT CATHEPSIN S PRECURSOR                              158  1e-38
 442 sp|P20721|CYSL_LYCES LOW-TEMPERATURE-INDUCED CYSTEINE PROTEINASE...   158  2e-38
 443 sp|P36184|ACP1_ENTHI CYSTEINE PROTEINASE ACP1 PRECURSOR               152  1e-36
 444 sp|Q01957|CPP1_ENTHI CYSTEINE PROTEINASE 1 PRECURSOR                  150  4e-36
 445 sp|O17473|CATL_BRUPA CATHEPSIN L-LIKE PRECURSOR                       150  6e-36
 446 sp|P46102|CYSP_PLAVN CYSTEINE PROTEINASE PRECURSOR                    150  6e-36
 447 sp|Q06964|CPP3_ENTHI CYSTEINE PROTEINASE 3 PRECURSOR (CYSTEINE P...   149  9e-36
 448 sp|Q01958|CPP2_ENTHI CYSTEINE PROTEINASE 2 PRECURSOR                  149  9e-36
 449 sp|P36185|ACP2_ENTHI CYSTEINE PROTEINASE ACP2 PRECURSOR               145  1e-34
 450 sp|P25781|CYSP_THEAN CYSTEINE PROTEINASE PRECURSOR                    145  1e-34
 451 sp|P22497|CYSP_THEPA CYSTEINE PROTEINASE PRECURSOR                    143  5e-34
 452 sp|P25805|CYSP_PLAFA THROPHOZOITE CYSTEINE PROTEINASE PRECURSOR ...   141  3e-33
 453 sp|P14518|BROM_ANACO BROMELAIN, STEM                                  139  6e-33
 454 sp|P16311|MMAL_DERFA MAJOR MITE FECAL ALLERGEN DER F 1 PRECURSOR...   138  1e-32
 455 sp|P42666|CYSP_PLAVI CYSTEINE PROTEINASE PRECURSOR                    129  1e-29
 456 sp|P08176|MMAL_DERPT MAJOR MITE FECAL ALLERGEN DER P 1 PRECURSOR...   121  3e-27
 457 sp|P80067|CATC_RAT DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (DPP...   111  3e-24
 458 sp|P97821|CATC_MOUSE DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (D...   109  9e-24
 459 sp|P25773|CATL_FELCA CATHEPSIN L (PROGESTERONE-DEPENDENT PROTEIN...   108  2e-23
 460 sp|Q26563|CATC_SCHMA CATHEPSIN C PRECURSOR                            108  3e-23
 461 sp|P53634|CATC_HUMAN DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (D...   107  3e-23
 462 sp|P25780|EUM1_EURMA MITE GROUP I ALLERGEN EUR M 1 (EUR M I)          100  7e-21
 463 sp|Q23894|CYS3_DICDI CYSTEINE PROTEINASE 3 (CYSTEINE PROTEINASE II)    95  2e-19
 464 sp|P43509|CPR5_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 5 PREC...    91  4e-18
 465 sp|P43508|CPR4_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 4 PREC...    90  5e-18
 466 sp|P05993|PAP5_CARPA CYSTEINE PROTEINASE (CLONE PLBPC13)               90  5e-18
 467 sp|P07688|CATB_BOVIN CATHEPSIN B PRECURSOR                             89  2e-17
 468 sp|P00787|CATB_RAT CATHEPSIN B PRECURSOR (CATHEPSIN B1) (RSG-2)        87  4e-17
 469 sp|P25807|CYS1_CAEEL GUT-SPECIFIC CYSTEINE PROTEINASE PRECURSOR        87  5e-17
 470 sp|P07858|CATB_HUMAN CATHEPSIN B PRECURSOR (CATHEPSIN B1) (APP S...    86  9e-17
 471 sp|P43157|CYSP_SCHJA CATHEPSIN B-LIKE CYSTEINE PROTEINASE PRECUR...    85  2e-16
 472 sp|P43233|CATB_CHICK CATHEPSIN B PRECURSOR (CATHEPSIN B1)              85  2e-16
 473 sp|P43510|CPR6_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 6 PREC...    85  2e-16
 474 sp|P25792|CYSP_SCHMA CATHEPSIN B-LIKE CYSTEINE PROTEINASE PRECUR...    85  3e-16
 475 sp|P10605|CATB_MOUSE CATHEPSIN B PRECURSOR (CATHEPSIN B1)              85  3e-16
 476 sp|P25802|CYS1_OSTOS CATHEPSIN B-LIKE CYSTEINE PROTEINASE 1 PREC...    80  9e-15
 477 sp|P25793|CYS2_HAECO CATHEPSIN B-LIKE CYSTEINE PROTEINASE 2 PREC...    78  2e-14
 478 sp|P19092|CYS1_HAECO CATHEPSIN B-LIKE CYSTEINE PROTEINASE 1 PREC...    78  4e-14
 479 sp|P43507|CPR3_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 3 PREC...    73  7e-13
 480 sp|P13823|SERA_PLAFG SERINE-REPEAT ANTIGEN PROTEIN PRECURSOR (P1...    70  6e-12
 481 sp|P32956|CC3_CARCN CYSTEINE PROTEINASE III (CC-III)                   61  4e-09
 482 sp|P32957|CC4_CARCN CYSTEINE PROTEINASE IV (CC-IV)                     60  9e-09
 483 sp|Q06544|CYS3_OSTOS CATHEPSIN B-LIKE CYSTEINE PROTEINASE 3            59  1e-08
 484 sp|P32954|CC1_CARCN CYSTEINE PROTEINASE I (CC-I)                       58  3e-08
 485 sp|P32955|CC2_CARCN CYSTEINE PROTEINASE II (CC-II)                     56  1e-07
 486 sp||CATL_CHICK_2 [Segment 2 of 2] CATHEPSIN L                          52  2e-06
 487 sp|P12399|CT2A_MOUSE CTLA-2-ALPHA PROTEIN PRECURSOR                    42  0.002
 488 sp|P05689|CATX_BOVIN CATHEPSIN                                         40  0.006
 489 sp|P12400|CT2B_MOUSE CTLA-2-BETA PROTEIN PRECURSOR                     39  0.019
 490 sp|P23897|HSER_RAT HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (G...    36  0.16
 491 sp|P20736|BM86_BOOMI GLYCOPROTEIN ANTIGEN BM86 PRECURSOR (PROTEC...    35  0.22
 492 sp|P46992|YJR1_YEAST HYPOTHETICAL 43.0 KD PROTEIN IN CPS1-FPP1 I...    32  1.9
 493 sp|P28493|PR5_ARATH PATHOGENESIS-RELATED PROTEIN 5 PRECURSOR (PR-5)    32  1.9
 494 sp|P54634|POLN_LORDV NON-STRUCTURAL POLYPROTEIN [CONTAINS: RNA-D...    31  3.2
 495 sp|Q02521|SPP2_YEAST SPLICEOSOME MATURATION PROTEIN SPP2               31  4.2
 496 sp|P41901|SPR3_YEAST SPORULATION-SPECIFIC SEPTIN                       31  4.2
 497 sp|Q01532|BLH1_YEAST CYSTEINE PROTEINASE 1 (Y3) (BLEOMYCIN HYDRO...    30  5.5
 498 sp|P24896|NU5M_CAEEL NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5            30  5.5
 499 sp|P25648|SRB8_YEAST SUPPRESSOR OF RNA POLYMERASE B SRB8               30  7.2
 500 sp|Q04723|PEPC_LACLC AMINOPEPTIDASE C                                  30  7.2
 501 sp|Q13867|BLMH_HUMAN BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH)         30  9.4
 502 sp|P87362|BLMH_CHICK BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH) (...    30  9.4
 503 sp|P70645|BLMH_RAT BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH)           30  9.4
 504
 505 >sp|P04988|CYS1_DICDI CYSTEINE PROTEINASE 1 PRECURSOR
 506           Length = 343
 507
 508  Score =  709 bits (1811), Expect = 0.0
 509  Identities = 343/351 (97%), Positives = 343/351 (97%), Gaps = 8/351 (2%)
 510
 511 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
 512             MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE
 513 Sbjct:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
 514
 515 Query:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPP 120
 516             ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP
 517 Sbjct:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP- 119
 518
 519 Query:  121 EEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 180
 520                TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE
 521 Sbjct:  120 ---TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 176
 522
 523 Query:  181 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ 240
 524 pattern 237                                                         ****
 525             CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG
 526 Sbjct:  177 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG---- 232
 527
 528 Query:  241 AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG 300
 529             AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG
 530 Sbjct:  233 AKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVG 292
 531
 532 Query:  301 YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
 533             YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII
 534 Sbjct:  293 YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343
 535
 536
 537 >sp|P43295|A494_ARATH PROBABLE CYSTEINE PROTEINASE A494 PRECURSOR
 538           Length = 313
 539
 540  Score =  273 bits (691), Expect = 4e-73
 541  Identities = 149/324 (45%), Positives = 194/324 (58%), Gaps = 26/324 (8%)
 542
 543 Query:  32  FQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKA---DTKFGVNKFADLSSDE 87
 544             F+ KF K Y S EE+  RF +FK+NL       L A+ H+      + GV +F+DL+  E
 545 Sbjct:  3   FKKKFGKVYGSIEEHYYRFSVFKANL-------LRAMRHQKMDPSARHGVTQFSDLTRSE 55
 546
 547 Query:  88  FKNYYLNNKEAI-FTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSC 146
 548             F+  +L  K       D   A  L  + +    PEE   FDWR RGAVTPVKNQG CGSC
 549 Sbjct:  56  FRRKHLGVKGGFKLPKDANQAPILPTQNL----PEE---FDWRDRGAVTPVKNQGSCGSC 108
 550
 551 Query:  147 WSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYI 206
 552             WSFSTTG +EG HF++  KLVSLSEQ LVDCDHEC + E E +CD GCNGGL  +A+ Y
 553 Sbjct:  109 WSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHEC-DPEEEGSCDSGCNGGLMNSAFEYT 167
 554
 555 Query:  207 IKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
 556 pattern 237                               ****
 557             +K GG+  E  YPYT   G  C  + + I     A +SNF+++  NE  +A  ++  GPL
 558 Sbjct:  168 LKTGGLMREKDYPYTGTDGGSCKLDRSKI----VASVSNFSVVSINEDQIAANLIKNGPL 223
 559
 560 Query:  267 AIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAK--NTIFRKNMPYWIVKNSWGAD 324
 561             A+A +A   Q YIGGV         L+HG+L+VGY +   +    K  PYWI+KNSWG
 562 Sbjct:  224 AVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGES 283
 563
 564 Query:  325 WGEQGYIYLRRGKNTCGVSNFVST 348
 565             WGE G+  + +G+N CGV + VST
 566 Sbjct:  284 WGENGFYKICKGRNICGVDSLVST 307
 567
 568
 569 >sp|P25804|CYSP_PEA CYSTEINE PROTEINASE 15A PRECURSOR (TURGOR-RESPONSIVE PROTEIN 15A)
 570           Length = 363
 571
 572  Score =  270 bits (684), Expect = 2e-72
 573  Identities = 144/327 (44%), Positives = 201/327 (61%), Gaps = 20/327 (6%)
 574
 575 Query:  26  QSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84
 576             +  F  F+ KF+K Y+  EE+  RF +FKSNL K +    +  N     + G+ KF+DL+
 577 Sbjct:  45  EHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAK----LHQNRDPTAEHGITKFSDLT 100
 578
 579 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCG 144
 580             + EF+  +L  K+ +    LP           +  PE+   FDWR +GAVTPVK+QG CG
 581 Sbjct:  101 ASEFRRQFLGLKKRL---RLPAHAQKAPILPTTNLPED---FDWREKGAVTPVKDQGSCG 154
 582
 583 Query:  145 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYN 204
 584             SCW+FSTTG +EG H+++  KLVSLSEQ LVDCDH C + E   +CD GCNGGL  NA+
 585 Sbjct:  155 SCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVC-DPEQAGSCDSGCNGGLMNNAFE 213
 586
 587 Query:  205 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTG 264
 588 pattern 237                                 ****
 589             Y++++GG+  E  Y YT   G+ C F+ + +     A +SNF+++  +E  +A  +V  G
 590 Sbjct:  214 YLLESGGVVQEKDYAYTGRDGS-CKFDKSKV----VASVSNFSVVTLDEDQIAANLVKNG 268
 591
 592 Query:  265 PLAIAADAVEWQFYIGGV-FDIPCNPNSLDHGILIVGY--SAKNTIFRKNMPYWIVKNSW 321
 593             PLA+A +A   Q Y+ GV     C  + LDHG+L+VG+   A   I  K  PYWI+KNSW
 594 Sbjct:  269 PLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSW 328
 595
 596 Query:  322 GADWGEQGYIYLRRGKNTCGVSNFVST 348
 597             G +WGEQGY  + RG+N CGV + VST
 598 Sbjct:  329 GQNWGEQGYYKICRGRNVCGVDSMVST 355
 599
 600
 601 >sp|P43296|RD19_ARATH CYSTEINE PROTEINASE RD19A PRECURSOR
 602           Length = 368
 603
 604  Score =  266 bits (672), Expect = 6e-71
 605  Identities = 156/367 (42%), Positives = 206/367 (55%), Gaps = 42/367 (11%)
 606
 607 Query:  6   LFVLAVFTVFVSSR---------------GIPPE---EQSQFLEFQDKFNKKY-SHEEYL 46
 608             +FVL+ F V VSS                G  P+    +  F  F+ KF K Y S+EE+
 609 Sbjct:  10  VFVLSFFIVSVSSSDVNDGDDLVIRQVVGGAEPQVLTSEDHFSLFKRKFGKVYASNEEHD 69
 610
 611 Query:  47  ERFEIFKSNLGKIEELNLIAINHKADTK--FGVNKFADLSSDEFKNYYLNNKEAI-FTDD 103
 612              RF +FK+NL +         + K D     GV +F+DL+  EF+  +L  +       D
 613 Sbjct:  70  YRFSVFKANLRRARR------HQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKD 123
 614
 615 Query:  104 LPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQ 163
 616                A  L  E +    PE+   FDWR  GAVTPVKNQG CGSCWSFS TG +EG +F++
 617 Sbjct:  124 ANKAPILPTENL----PED---FDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLAT 176
 618
 619 Query:  164 NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 223
 620              KLVSLSEQ LVDCDHEC + E  ++CD GCNGGL  +A+ Y +K GG+  E  YPYT +
 621 Sbjct:  177 GKLVSLSEQQLVDCDHEC-DPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGK 235
 622
 623 Query:  224 TGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVF 283
 624 pattern 237              ****
 625              G  C  + + I     A +SNF++I  +E  +A  +V  GPLA+A +A   Q YIGGV
 626 Sbjct:  236 DGKTCKLDKSKI----VASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVS 291
 627
 628 Query:  284 DIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCG 341
 629                     L+HG+L+VGY A        K  PYWI+KNSWG  WGE G+  + +G+N CG
 630 Sbjct:  292 CPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICG 351
 631
 632 Query:  342 VSNFVST 348
 633             V + VST
 634 Sbjct:  352 VDSMVST 358
 635
 636
 637 >sp|Q10716|CYS1_MAIZE CYSTEINE PROTEINASE 1 PRECURSOR
 638           Length = 371
 639
 640  Score =  252 bits (638), Expect = 6e-67
 641  Identities = 138/332 (41%), Positives = 190/332 (56%), Gaps = 23/332 (6%)
 642
 643 Query:  26  QSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84
 644             +S FL F  +F K Y   +E+  R  +FK NL +     L+        + GV KF+DL+
 645 Sbjct:  45  ESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLL----DPSAEHGVTKFSDLT 100
 646
 647 Query:  85  SDEFKNYYLN---NKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQG 141
 648               EF+  YL    ++ A+  +    A        + +P +    FDWR  GAV PVKNQG
 649 Sbjct:  101 PAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDD----FDWRDHGAVGPVKNQG 156
 650
 651 Query:  142 QCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPN 201
 652              CGSCWSFS +G +EG H+++  KL  LSEQ  VDCDHEC   E  ++CD GCNGGL
 653 Sbjct:  157 SCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSE-PDSCDSGCNGGLMTT 215
 654
 655 Query:  202 AYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIV 261
 656 pattern 237                                    ****
 657             A++Y+ K GG+++E  YPYT   G +C F+ + I     A + NF+++  +E  ++  ++
 658 Sbjct:  216 AFSYLQKAGGLESEKDYPYTGSDG-KCKFDKSKI----VASVQNFSVVSVDEAQISANLI 270
 659
 660 Query:  262 STGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKN 319
 661               GPLAI  +A   Q YIGGV         LDHG+L+VGY A     I  K+ PYWI+KN
 662 Sbjct:  271 KHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKN 330
 663
 664 Query:  320 SWGADWGEQGYIYLRRG---KNTCGVSNFVST 348
 665             SWG +WGE GY  + RG   +N CGV + VST
 666 Sbjct:  331 SWGENWGENGYYKICRGSNVRNKCGVDSMVST 362
 667
 668
 669 >sp|P04989|CYS2_DICDI CYSTEINE PROTEINASE 2 PRECURSOR (PRESTALK CATHEPSIN)
 670           Length = 376
 671
 672  Score =  250 bits (633), Expect = 2e-66
 673  Identities = 147/391 (37%), Positives = 213/391 (53%), Gaps = 63/391 (16%)
 674
 675 Query:  1   MKVILLFVLAVFTVFVSSRGIP-------PEEQSQFLEFQDKFNKKYSHEEYLERFEIFK 53
 676             M++++  +L +F  F  +   P        + ++ F E+  KFN++YS  E+  R+ IFK
 677 Sbjct:  1   MRLLVFLILLIFVNFSFANVRPNGRRFSESQYRTAFTEWTLKFNRQYSSSEFSNRYSIFK 60
 678
 679 Query:  54  SNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK-EAIFTDDLPVADYLDD 112
 680             SN+  ++  N       + T  G+N FAD++++E++  YL  +  A   +     + L+
 681 Sbjct:  61  SNMDYVDNWNS---KGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNV 117
 682
 683 Query:  113 EFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQ 172
 684             E + + P     + DWRT+ AVTP+K+QGQCGSCWSFSTTG+ EG H +   KLVSLSEQ
 685 Sbjct:  118 EDLQTNPK----SIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQ 173
 686
 687 Query:  173 NLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNS 232
 688             NLVDC        G E  + GC+GGL  NA++YIIKN GI TESSYPYTAETG+ C FN
 689 Sbjct:  174 NLVDC-------SGPEE-NFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNK 225
 690
 691 Query:  233 ANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAV--EWQFYIGGVFDIP-CNP 289
 692 pattern 237     ****
 693             ++IG    A I  +  I     +        GP+++A DA    +Q Y  G++  P C+P
 694 Sbjct:  226 SDIG----ATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSP 281
 695
 696 Query:  290 NSLDHGILIVGY--------------------------------SAKNTIFRKNMPYWIV 317
 697               LDHG+L+VGY                                 + +++  K   YWIV
 698 Sbjct:  282 TELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIV 341
 699
 700 Query:  318 KNSWGADWGEQGYIYLRRG-KNTCGVSNFVS 347
 701             KNSWG  WG +GYI + +  KN CG+++  S
 702 Sbjct:  342 KNSWGTSWGIKGYILMSKDRKNNCGIASVSS 372
 703
 704
 705 >sp|P54640|CYS5_DICDI CYSTEINE PROTEINASE 5 PRECURSOR
 706           Length = 344
 707
 708  Score =  238 bits (601), Expect = 1e-62
 709  Identities = 139/370 (37%), Positives = 201/370 (53%), Gaps = 45/370 (12%)
 710
 711 Query:  1   MKVI-LLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKI 59
 712             MKV+  L VL V       +    + ++ F ++     K Y+ EE+  R+ IF +N+  +
 713 Sbjct:  1   MKVLSFLCVLLVSVATAKQQFSELQYRNAFTDWMITHQKSYTSEEFGARYNIFTANMDYV 60
 714
 715 Query:  60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP 119
 716             ++ N    +  ++T  G+N FAD++++E++N YL  K   F     +    +    NS
 717 Sbjct:  61  QQWN----SKGSETVLGLNNFADITNEEYRNTYLGTK---FDASSLIGTQEEKVHTNSSA 113
 718
 719 Query:  120 PEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDH 179
 720               +    DWR+ GAVTPVKNQGQCG CWSFSTTG+ EG HF S+ +LVSLSEQNL+DC
 721 Sbjct:  114 ASK----DWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCST 169
 722
 723 Query:  180 ECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEE 239
 724 pattern 237                                                          ***
 725             E          + GC+GGL   A+ YII N GI TESSYPY AE G +C + S N G
 726 Sbjct:  170 E----------NSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENG-KCEYKSENSG--- 215
 727
 728 Query:  240 QAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIP-CNPNSLDHGI 296
 729 pattern 240 *
 730              A +S++  +           V+  P+++A DA    +Q Y  G++  P C+  +LDHG+
 731 Sbjct:  216 -ATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGV 274
 732
 733 Query:  297 LIVGY--------------SAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCG 341
 734             L VGY              S+ N     +  YWIVKNSWG  WG +GYI + R + N CG
 735 Sbjct:  275 LAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCG 334
 736
 737 Query:  342 VSNFVSTSII 351
 738             +++  S  ++
 739 Sbjct:  335 IASSASFPVV 344
 740
 741
 742 >sp|P14658|CYSP_TRYBB CYSTEINE PROTEINASE PRECURSOR
 743           Length = 450
 744
 745  Score =  236 bits (597), Expect = 4e-62
 746  Identities = 137/354 (38%), Positives = 193/354 (53%), Gaps = 34/354 (9%)
 747
 748 Query:  3   VILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEE 61
 749             V+L     + +V + S  +    + +F  F+ K+ K Y   +E   RF  F+ N+   E+
 750 Sbjct:  15  VLLAMAACLASVALGSLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENM---EQ 71
 751
 752 Query:  62  LNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPE 121
 753               + A  +   T FGV  F+D++ +EF+  Y N            A     + +N
 754 Sbjct:  72  AKIQAAANPYAT-FGVTPFSDMTREEFRARYRNGASYF-----AAAQKRLRKTVNVTTGR 125
 755
 756 Query:  122 EQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHEC 181
 757                A DWR +GAVTPVK QGQCGSCW+FST GN+EGQ  ++ N LVSLSEQ LV CD
 758 Sbjct:  126 APAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD--- 182
 759
 760 Query:  182 MEYEGEEACDEGCNGGLQPNAYNYIIKN--GGIQTESSYPYTAETG--TQCNFNSANIGP 237
 761 pattern 237                                                            *
 762                      D GCNGGL  NA+N+I+ +  G + TE+SYPY +  G   QC  N   IG
 763 Sbjct:  183 -------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIG- 234
 764
 765 Query:  238 EEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGIL 297
 766 pattern 238 ***
 767                A I++   +P++E  +A Y+   GPLAIA DA  +  Y GG+    C    LDHG+L
 768 Sbjct:  235 ---AAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGIL-TSCTSKQLDHGVL 290
 769
 770 Query:  298 IVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
 771             +VGY+  +     N PYWI+KNSW   WGE GYI + +G N C ++  VS++++
 772 Sbjct:  291 LVGYNDNS-----NPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339
 773
 774
 775 >sp|Q26534|CATL_SCHMA CATHEPSIN L PRECURSOR (SMCL1)
 776           Length = 319
 777
 778  Score =  233 bits (589), Expect = 3e-61
 779  Identities = 128/334 (38%), Positives = 190/334 (56%), Gaps = 30/334 (8%)
 780
 781 Query:  21  IPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKF 80
 782             +P     ++++F+ K+ K+Y   E   RF IFKSN+ K +   L  +  +    +GV  +
 783 Sbjct:  12  LPGNVDEKYVQFKLKYRKQYHETEDEIRFNIFKSNILKAQ---LYQVFVRGSAIYGVTPY 68
 784
 785 Query:  81  ADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQ 140
 786             +DL++DEF   +L     + +        L  E +N+IP      FDWR +GAVT VKNQ
 787 Sbjct:  69  SDLTTDEFARTHLTASWVVPSSRSNTPTSLGKE-VNNIPKN----FDWREKGAVTEVKNQ 123
 788
 789 Query:  141 GQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQP 200
 790             G CGSCW+FSTTGNVE Q F    KL+SLSEQ LVDCD            D+GCNGGL
 791 Sbjct:  124 GMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD----------GLDDGCNGGLPS 173
 792
 793 Query:  201 NAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYI 260
 794 pattern 237                                     ****
 795             NAY  IIK GG+  E +YPY A+   +C+  +  +       I++   + ++ET +A ++
 796 Sbjct:  174 NAYESIIKMGGLMLEDNYPYDAK-NEKCHLKTDGVA----VYINSSVNLTQDETELAAWL 228
 797
 798 Query:  261 VSTGPLAIAADAVEWQFYIGGV---FDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIV 317
 799                  +++  +A+  QFY  G+   + I C+   LDH +L+VGY     +  KN P+WIV
 800 Sbjct:  229 YHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYG----VSEKNEPFWIV 284
 801
 802 Query:  318 KNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
 803             KNSWG +WGE GY  + RG  +CG++   ++++I
 804 Sbjct:  285 KNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318
 805
 806
 807 >sp|P35591|CYS1_LEIPI CYSTEINE PROTEINASE 1 PRECURSOR (AMASTIGOTE CYSTEINE PROTEINASE A-1)
 808           Length = 354
 809
 810  Score =  233 bits (589), Expect = 3e-61
 811  Identities = 144/355 (40%), Positives = 192/355 (53%), Gaps = 40/355 (11%)
 812
 813 Query:  5   LLFVLAVFTVFVSSRGI-------PPEEQ----SQFLEFQDKFNKKYSHE-EYLERFEIF 52
 814             LLF + V  +FV   G        PP +     + +  F+ +  K +  + E   RF  F
 815 Sbjct:  7   LLFAIVVTILFVVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAF 66
 816
 817 Query:  53  KSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDD 112
 818             K N+     LN    +   D      KFADL+  EF   YLN           + D+ +D
 819 Sbjct:  67  KQNMQTAYFLNTQNPHAHYDVS---GKFADLTPQEFAKLYLNPDYYA----RHLKDHKED 119
 820
 821 Query:  113 EFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQ 172
 822               ++   P    + DWR +GAVTPVKNQG CGSCW+FS  GN+EGQ   S + LVSLSEQ
 823 Sbjct:  120 VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQ 179
 824
 825 Query:  173 NLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIK--NGGIQTESSYPYTAETGTQCNF 230
 826              LV CD+           DEGCNGGL   A N+I++  NG + TE+SYPYT+  GT+
 827 Sbjct:  180 MLVSCDN----------IDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPC 229
 828
 829 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 830 pattern 237       ****
 831             +      E  AKI+ F  +P +E  +A ++   GP+A+A DA  WQ Y GGV  + C
 832 Sbjct:  230 HDEG---EVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSL-CLAW 285
 833
 834 Query:  291 SLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNF 345
 835             SL+HG+LIVG++ KN       PYWIVKNSWG+ WGE+GYI L  G N C + N+
 836 Sbjct:  286 SLNHGVLIVGFN-KNA----KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNY 335
 837
 838
 839 >sp|P25775|LCPA_LEIME CYSTEINE PROTEINASE A PRECURSOR
 840           Length = 354
 841
 842  Score =  231 bits (584), Expect = 1e-60
 843  Identities = 143/355 (40%), Positives = 192/355 (53%), Gaps = 40/355 (11%)
 844
 845 Query:  5   LLFVLAVFTVFVSSRGI-------PPEEQ----SQFLEFQDKFNKKYSHE-EYLERFEIF 52
 846             LLF + V  +FV   G        PP +     + +  F+ +  K +  + E   RF  F
 847 Sbjct:  7   LLFAIVVTILFVVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAF 66
 848
 849 Query:  53  KSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDD 112
 850             K N+     LN    +   D      KFADL+  EF   YLN           + ++ +D
 851 Sbjct:  67  KQNMQTAYFLNTQNPHAHYDVS---GKFADLTPQEFAKLYLNPDYYA----RHLKNHKED 119
 852
 853 Query:  113 EFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQ 172
 854               ++   P    + DWR +GAVTPVKNQG CGSCW+FS  GN+EGQ   S + LVSLSEQ
 855 Sbjct:  120 VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQ 179
 856
 857 Query:  173 NLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIK--NGGIQTESSYPYTAETGTQCNF 230
 858              LV CD+           DEGCNGGL   A N+I++  NG + TE+SYPYT+  GT+
 859 Sbjct:  180 MLVSCDN----------IDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPC 229
 860
 861 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPN 290
 862 pattern 237       ****
 863             +      E  AKI+ F  +P +E  +A ++   GP+A+A DA  WQ Y GGV  + C
 864 Sbjct:  230 HDEG---EVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSL-CLAW 285
 865
 866 Query:  291 SLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNF 345
 867             SL+HG+LIVG++ KN       PYWIVKNSWG+ WGE+GYI L  G N C + N+
 868 Sbjct:  286 SLNHGVLIVGFN-KNA----KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNY 335
 869
 870
 871 >sp|P13277|CYS1_HOMAM DIGESTIVE CYSTEINE PROTEINASE 1 PRECURSOR
 872           Length = 322
 873
 874  Score =  221 bits (558), Expect = 1e-57
 875  Identities = 132/349 (37%), Positives = 184/349 (51%), Gaps = 41/349 (11%)
 876
 877 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKI 59
 878             MKV+ LF+  +     +           + EF+ KF +KY   EE   R  +F  NL  I
 879 Sbjct:  1   MKVVALFLFGLALAAANP---------SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYI 51
 880
 881 Query:  60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP 119
 882             EE N      +      +N+F+D+++++F       K+       P A      F ++
 883 Sbjct:  52  EEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKG----PRPAA-----VFTSTDA 102
 884
 885 Query:  120 PEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDH 179
 886               E T  DWRT+GAVTPVK+QGQCGSCW+FSTTG +EGQHF+   +LVSLSEQ LVDC
 887 Sbjct:  103 APESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-- 160
 888
 889 Query:  180 ECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEE 239
 890 pattern 237                                                          ***
 891                   G    ++GCNGG    A  Y+  NGG+ TESSYPY A   T C FNS  IG
 892 Sbjct:  161 -----AGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNT-CRFNSNTIG--- 211
 893
 894 Query:  240 QAKISNFTMIPK-NETVMAGYIVSTGPLAIAADAVEWQF---YIGGVFDIPCNPNSLDHG 295
 895 pattern 240 *
 896              A  + +  I + +E+ +       GP+++A DA    F   Y G  ++  C+ + LDH
 897 Sbjct:  212 -ATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHA 270
 898
 899 Query:  296 ILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVS 343
 900             +L VGY ++         +W+VKNSW   WGE GYI + R + N CG++
 901 Sbjct:  271 VLAVGYGSEG-----GQDFWLVKNSWATSWGESGYIKMARNRNNNCGIA 314
 902
 903
 904 >sp|P25779|CYSP_TRYCR CRUZIPAIN PRECURSOR (MAJOR CYSTEINE PROTEINASE) (CRUZAINE)
 905           Length = 467
 906
 907  Score =  221 bits (557), Expect = 2e-57
 908  Identities = 134/358 (37%), Positives = 189/358 (52%), Gaps = 38/358 (10%)
 909
 910 Query:  3   VILLFVLAVFTVFV--SSRGIPPEEQ--SQFLEFQDKFNKKY-SHEEYLERFEIFKSNLG 57
 911             ++L  VL V    V  ++  +  EE   SQF EF+ K  + Y S  E   R  +F+ NL
 912 Sbjct:  8   LLLAAVLVVMACLVPAATASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLF 67
 913
 914 Query:  58  KIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINS 117
 915              +  L+  A  H     FGV  F+DL+ +EF++ Y N               +  E + +
 916 Sbjct:  68  -LARLHAAANPHAT---FGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGA 123
 917
 918 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDC 177
 919                    A DWR RGAVT VK+QGQCGSCW+FS  GNVE Q F++ + L +LSEQ LV C
 920 Sbjct:  124 -----PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSC 178
 921
 922 Query:  178 DHECMEYEGEEACDEGCNGGLQPNAYNYIIK--NGGIQTESSYPYTAETGTQ--CNFNSA 233
 923             D            D GC+GGL  NA+ +I++  NG + TE SYPY +  G    C  +
 924 Sbjct:  179 D----------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGH 228
 925
 926 Query:  234 NIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLD 293
 927 pattern 237    ****
 928              +G    A I+    +P++E  +A ++   GP+A+A DA  W  Y GGV    C    LD
 929 Sbjct:  229 TVG----ATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM-TSCVSEQLD 283
 930
 931 Query:  294 HGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
 932             HG+L+VGY+    +     PYWI+KNSW   WGE+GYI + +G N C V    S++++
 933 Sbjct:  284 HGVLLVGYNDSAAV-----PYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 336
 934
 935
 936 >sp|P41721|CATV_NPVBM VIRAL CATHEPSIN (V-CATH)
 937           Length = 323
 938
 939  Score =  216 bits (545), Expect = 5e-56
 940  Identities = 131/349 (37%), Positives = 181/349 (51%), Gaps = 32/349 (9%)
 941
 942 Query:  5   LLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELN 63
 943             +LF L V+ V  S+   P +  + F EF  +FNK YS E E L RF+IF+ NL +I
 944 Sbjct:  4   ILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEI---- 59
 945
 946 Query:  64  LIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQ 123
 947              I  N     K+ +NKF+DLS DE    Y        T +      LD       P +
 948 Sbjct:  60  -INKNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQP-----PGKGP 113
 949
 950 Query:  124 TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECME 183
 951               FDWR    VT VKNQG CG+CW+F+T G++E Q  I  N+L++LSEQ ++DCD
 952 Sbjct:  114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---- 169
 953
 954 Query:  184 YEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKI 243
 955 pattern 237                                                      ****
 956                    D GCNGGL   A+  IIK GG+Q ES YPY A+    C  NS     + +
 957 Sbjct:  170 ------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEAD-NNNCRMNSNKFLVQVK--- 219
 958
 959 Query:  244 SNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSA 303
 960               +  I   E  +   +   GP+ +A DA +   Y  G+    C  + L+H +L+VGY
 961 Sbjct:  220 DCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIKY-CFDSGLNHAVLLVGYGV 278
 962
 963 Query:  304 KNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN-FVSTSII 351
 964             +N     N+PYW  KN+WG DWGE G+  +++  N CG+ N   ST++I
 965 Sbjct:  279 EN-----NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322
 966
 967
 968 >sp|P25782|CYS2_HOMAM DIGESTIVE CYSTEINE PROTEINASE 2 PRECURSOR
 969           Length = 323
 970
 971  Score =  215 bits (541), Expect = 1e-55
 972  Identities = 132/357 (36%), Positives = 189/357 (51%), Gaps = 40/357 (11%)
 973
 974 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKI 59
 975             MKV +LF+  V     S           +  F+ K+ ++Y   EE   R  IF+ N   I
 976 Sbjct:  1   MKVAVLFLCGVALAAASP---------SWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYI 51
 977
 978 Query:  60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIP 119
 979             EE N    N +      +NKF D++ +EF      N   I     PV+ +   +
 980 Sbjct:  52  EEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGN---IPRRSAPVSVFYPKKETGP-- 106
 981
 982 Query:  120 PEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDH 179
 983               + T  DWRT+GAVTPVK+QGQCGSCW+FSTTG++EGQHF+    L+SL+EQ LVDC
 984 Sbjct:  107 --QATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDC-- 162
 985
 986 Query:  180 ECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEE 239
 987 pattern 237                                                          ***
 988                         +GCNGG   +A++YI  N GI TE++YPY A  G+ C F+S ++
 989 Sbjct:  163 ------SRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGS-CRFDSNSVA--- 212
 990
 991 Query:  240 QAKISNFTMIPK-NETVMAGYIVSTGPLAIAADAV--EWQFYIGGVFDIP-CNPNSLDHG 295
 992 pattern 240 *
 993              A  S  T I   +ET +   +   GP+++  DA    +QFY  GV+  P C+P+ LDH
 994 Sbjct:  213 -ATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHA 271
 995
 996 Query:  296 ILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVSTSII 351
 997             +L VGY ++         +W+VKNSW   WG+ GYI + R + N CG++   S  ++
 998 Sbjct:  272 VLAVGYGSEG-----GQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323
 999
1000
1001 >sp|P41715|CATV_NPVCF VIRAL CATHEPSIN (V-CATH)
1002           Length = 324
1003
1004  Score =  214 bits (540), Expect = 2e-55
1005  Identities = 130/351 (37%), Positives = 188/351 (53%), Gaps = 33/351 (9%)
1006
1007 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKI 59
1008             M  I+L++L    V  ++  +  +  + F +F  KFNK YS E E L RF+IF+ NL +I
1009 Sbjct:  1   MNKIVLYLLVYGAVQCAAYDVL-KAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEI 59
1010
1011 Query:  60  EELNLIAINHKADT-KFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSI 118
1012                  I  NH   T ++ +NKFADLS DE  + Y      + T +      LD
1013 Sbjct:  60  -----INKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRP----- 109
1014
1015 Query:  119 PPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCD 178
1016             P +    FDWR    VT VKNQG CG+CW+F+T G++E Q  I  N+ ++LSEQ L+DCD
1017 Sbjct:  110 PDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD 169
1018
1019 Query:  179 HECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPE 238
1020 pattern 237                                                           **
1021                         D GC+GGL   A+  ++  GGIQ ES YPY A  G  C  N+A    +
1022 Sbjct:  170 F----------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNG-DCRANAAKFVVK 218
1023
1024 Query:  239 EQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILI 298
1025 pattern 239 **
1026              +      T+    E  +   + S GP+ +A DA +   Y  G+    C  + L+H +L+
1027 Sbjct:  219 VKKCYRYITVF---EEKLKDLLRSVGPIPVAIDASDIVNYKRGIMKY-CANHGLNHAVLL 274
1028
1029 Query:  299 VGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTS 349
1030             VGY+ +N      +P+WI+KN+WGADWGEQGY  +++  N CG+ N + +S
1031 Sbjct:  275 VGYAVEN-----GVPFWILKNTWGADWGEQGYFRVQQNINACGIQNELPSS 320
1032
1033
1034 >sp|P25784|CYS3_HOMAM DIGESTIVE CYSTEINE PROTEINASE 3 PRECURSOR
1035           Length = 321
1036
1037  Score =  214 bits (539), Expect = 2e-55
1038  Identities = 125/326 (38%), Positives = 184/326 (56%), Gaps = 47/326 (14%)
1039
1040 Query:  32  FQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEF-- 88
1041             F+ ++ +KY   +E L R  +F+ N   IE+ N    N +   K  +N+F D++++EF
1042 Sbjct:  23  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 82
1043
1044 Query:  89  --KNYYLNNK---EAIFTDDL-PVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQ 142
1045               K Y   ++   +A+FT +  P+A                   DWRT+  VTPVK+Q Q
1046 Sbjct:  83  VMKGYKKGSRGEPKAVFTAEAGPMA----------------ADVDWRTKALVTPVKDQEQ 126
1047
1048 Query:  143 CGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNA 202
1049             CGSCW+FS TG +EGQHF+  ++LVSLSEQ LVDC          +  ++GC GG   +A
1050 Sbjct:  127 CGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDC--------STDYGNDGCGGGWMTSA 178
1051
1052 Query:  203 YNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVS 262
1053 pattern 237                                   ****
1054             ++YI  NGGI TESSYPY AE    C F++ +IG    A  +    +   E  +   +
1055 Sbjct:  179 FDYIKDNGGIDTESSYPYEAE-DRSCRFDANSIG----AICTGSVEVQHTEEALQEAVSG 233
1056
1057 Query:  263 TGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKN 319
1058              GP+++A DA    +QFY  GV ++  C+P  LDHG+L VGY  ++T       YW+VKN
1059 Sbjct:  234 VGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTEST-----KDYWLVKN 288
1060
1061 Query:  320 SWGADWGEQGYIYLRRGK-NTCGVSN 344
1062             SWG+ WG+ GYI + R + N CG+++
1063 Sbjct:  289 SWGSSWGDAGYIKMSRNRDNNCGIAS 314
1064
1065
1066 >sp|P07154|CATL_RAT CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTEIN) (MEP) (CYCLIC
1067             PROTEIN-2) (CP-2)
1068           Length = 334
1069
1070  Score =  212 bits (535), Expect = 7e-55
1071  Identities = 127/359 (35%), Positives = 195/359 (53%), Gaps = 39/359 (10%)
1072
1073 Query:  3   VILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEEL 62
1074             ++LL VL + T   + +       +Q+ +++    + Y   E   R  +++ N+  I+
1075 Sbjct:  4   LLLLAVLCLGTALATPK-FDQTFNAQWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLH 62
1076
1077 Query:  63  NLIAINHKADTKFGVNKFADLSSDEFKN------YYLNNKEAIFTDDLPVADYLDDEFIN 116
1078             N    N K      +N F D++++EF+       +  + K  +F + L +
1079 Sbjct:  63  NGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML---------- 112
1080
1081 Query:  117 SIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVD 176
1082              IP       DWR +G VTPVKNQGQCGSCW+FS +G +EGQ F+   KL+SLSEQNLVD
1083 Sbjct:  113 QIPK----TVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168
1084
1085 Query:  177 CDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG 236
1086             C H+    +G    ++GCNGGL   A+ YI +NGG+ +E SYPY A+ G+ C + +
1087 Sbjct:  169 CSHD----QG----NQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGS-CKYRA---- 215
1088
1089 Query:  237 PEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIP-CNPNSLD 293
1090 pattern 237 ****
1091                 A  + F  IP+ E  +   + + GP+++A DA     QFY  G++  P C+   LD
1092 Sbjct:  216 EYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLD 275
1093
1094 Query:  294 HGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT-CGVSNFVSTSII 351
1095             HG+L+VGY  + T   K+  YW+VKNSWG +WG  GYI + + +N  CG++   S  I+
1096 Sbjct:  276 HGVLVVGYGYEGTDSNKD-KYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333
1097
1098
1099 >sp|P06797|CATL_MOUSE CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTEIN) (MEP)
1100           Length = 334
1101
1102  Score =  212 bits (533), Expect = 1e-54
1103  Identities = 126/359 (35%), Positives = 198/359 (55%), Gaps = 39/359 (10%)
1104
1105 Query:  3   VILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEEL 62
1106             ++LL VL + T   + +       +++ +++    + Y   E   R  I++ N+  I+
1107 Sbjct:  4   LLLLAVLCLGTALATPK-FDQTFSAEWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLH 62
1108
1109 Query:  63  NLIAINHKADTKFGVNKFADLSSDEFKN------YYLNNKEAIFTDDLPVADYLDDEFIN 116
1110             N    N +      +N F D++++EF+       +  + K  +F + L +
1111 Sbjct:  63  NGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLML---------- 112
1112
1113 Query:  117 SIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVD 176
1114              IP     + DWR +G VTPVKNQGQCGSCW+FS +G +EGQ F+   KL+SLSEQNLVD
1115 Sbjct:  113 KIPK----SVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168
1116
1117 Query:  177 CDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG 236
1118             C H     +G    ++GCNGGL   A+ YI +NGG+ +E SYPY A+ G+ C + +
1119 Sbjct:  169 CSHA----QG----NQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGS-CKYRA---- 215
1120
1121 Query:  237 PEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIP-CNPNSLD 293
1122 pattern 237 ****
1123                 A  + F  IP+ E  +   + + GP+++A DA     QFY  G++  P C+  +LD
1124 Sbjct:  216 EFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD 275
1125
1126 Query:  294 HGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVSTSII 351
1127             HG+L+VGY  + T   KN  YW+VKNSWG++WG +GYI + + + N CG++   S  ++
1128 Sbjct:  276 HGVLLVGYGYEGTDSNKN-KYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333
1129
1130
1131 >sp|P12412|CYSP_VIGMU VIGNAIN PRECURSOR (BEAN ENDOPEPTIDASE) (CYSTEINE PROTEINASE)
1132             (SULFHYDRYL-ENDOPEPTIDASE) (SH-EP)
1133           Length = 362
1134
1135  Score =  209 bits (526), Expect = 8e-54
1136  Identities = 127/313 (40%), Positives = 179/313 (56%), Gaps = 35/313 (11%)
1137
1138 Query:  47  ERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDD 103
1139             +RF +FK+N+  +   N +   +K      +NKFAD+++ EF++ Y  +K     +F
1140 Sbjct:  58  KRFNVFKANVMHVHNTNKMDKPYKLK----LNKFADMTNHEFRSTYAGSKVNHHKMFRGS 113
1141
1142 Query:  104 LPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQ 163
1143                +     E + S+P     + DWR +GAVT VK+QGQCGSCW+FST   VEG + I
1144 Sbjct:  114 QHGSGTFMYEKVGSVP----ASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKT 169
1145
1146 Query:  164 NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 223
1147             NKLVSLSEQ LVDCD E          ++GCNGGL  +A+ +I + GGI TES+YPYTA+
1148 Sbjct:  170 NKLVSLSEQELVDCDKE---------ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQ 220
1149
1150 Query:  224 TGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGG 281
1151 pattern 237              ****
1152              GT C+ +  N   +    I     +P N+       V+  P+++A DA   ++QFY  G
1153 Sbjct:  221 EGT-CDESKVN---DLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEG 276
1154
1155 Query:  282 VFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG----K 337
1156             VF   CN   L+HG+ IVGY    T+   N  YWIV+NSWG +WGEQGYI ++R     +
1157 Sbjct:  277 VFTGDCN-TDLNHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGEQGYIRMQRNISKKE 331
1158
1159 Query:  338 NTCGVSNFVSTSI 350
1160               CG++   S  I
1161 Sbjct:  332 GLCGIAMMASYPI 344
1162
1163
1164 >sp|P25783|CATV_NPVAC VIRAL CATHEPSIN (V-CATH)
1165           Length = 323
1166
1167  Score =  209 bits (526), Expect = 8e-54
1168  Identities = 129/349 (36%), Positives = 179/349 (50%), Gaps = 32/349 (9%)
1169
1170 Query:  5   LLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELN 63
1171             +LF L V+ V  S+     +  + F EF  +FNK Y  E E L RF+IF+ NL +I
1172 Sbjct:  4   ILFYLFVYGVVNSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEI---- 59
1173
1174 Query:  64  LIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQ 123
1175              I  N     K+ +NKF+DLS DE    Y      I T +      LD       P +
1176 Sbjct:  60  -INKNQNDSAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQP-----PGKGP 113
1177
1178 Query:  124 TAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECME 183
1179               FDWR    VT VKNQG CG+CW+F+T  ++E Q  I  N+L++LSEQ ++DCD
1180 Sbjct:  114 LEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---- 169
1181
1182 Query:  184 YEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKI 243
1183 pattern 237                                                      ****
1184                    D GCNGGL   A+  IIK GG+Q ES YPY A+    C  NS     + +
1185 Sbjct:  170 ------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEAD-NNNCRMNSNKFLVQVK--- 219
1186
1187 Query:  244 SNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSA 303
1188               +  I   E  +   +   GP+ +A DA +   Y  G+    C  + L+H +L+VGY
1189 Sbjct:  220 DCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKY-CFNSGLNHAVLLVGYGV 278
1190
1191 Query:  304 KNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN-FVSTSII 351
1192             +N     N+PYW  KN+WG DWGE G+  +++  N CG+ N   ST++I
1193 Sbjct:  279 EN-----NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322
1194
1195
1196 >sp|P25975|CATL_BOVIN CATHEPSIN L PRECURSOR
1197           Length = 334
1198
1199  Score =  208 bits (525), Expect = 1e-53
1200  Identities = 126/351 (35%), Positives = 184/351 (51%), Gaps = 35/351 (9%)
1201
1202 Query:  7   FVLAVFTVFVSSRG--IPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNL 64
1203             F L V  + V+S    + P   + + +++    + Y   E   R  +++ N   I+  N
1204 Sbjct:  5   FFLTVLCLGVASAAPKLDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQ 64
1205
1206 Query:  65  IAINHKADTKFGVNKFADLSSDEFK---NYYLNNKEAIFTDDLPVADYLDDEFINSIPPE 121
1207                  K   +  +N F D++++EF+   N + N K               +  +  +P
1208 Sbjct:  65  EYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHK-------KGKLFHEPLLVDVPK- 116
1209
1210 Query:  122 EQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHEC 181
1211                + DW  +G VTPVKNQGQCGSCW+FS TG +EGQ F    KLVSLSEQNLVDC
1212 Sbjct:  117 ---SVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRA- 172
1213
1214 Query:  182 MEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPE-EQ 240
1215 pattern 237                                                        ** **
1216                +G    ++GCNGGL  NA+ YI  NGG+ +E SYPY A     CN+      PE
1217 Sbjct:  173 ---QG----NQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYK-----PECSA 220
1218
1219 Query:  241 AKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGIL 297
1220             A  + F  IP+ E  +   + + GP+++A DA    +QFY  G+ +D  C+   LDHG+L
1221 Sbjct:  221 ANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVL 280
1222
1223 Query:  298 IVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT-CGVSNFVS 347
1224             +VGY  + T    N  +WIVKNSWG +WG  GY+ + + +N  CG++   S
1225 Sbjct:  281 VVGYGFEGTDSNNN-KFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330
1226
1227
1228 >sp|Q40143|CYS3_LYCES CYSTEINE PROTEINASE 3 PRECURSOR
1229           Length = 356
1230
1231  Score =  207 bits (522), Expect = 2e-53
1232  Identities = 129/331 (38%), Positives = 181/331 (53%), Gaps = 40/331 (12%)
1233
1234 Query:  29  FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
1235             F  F  +  K+Y S EE  +RFEIF  NL  I   N   +++K     G+N+F DL+ DE
1236 Sbjct:  57  FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYK----LGINEFTDLTWDE 112
1237
1238 Query:  88  FKNYYLN---NKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCG 144
1239             F+ + L    N  A    +L +         N + PE +   DWR  G V+PVK QG+CG
1240 Sbjct:  113 FRKHKLGASQNCSATTKGNLKLT--------NVVLPETK---DWRKDGIVSPVKAQGKCG 161
1241
1242 Query:  145 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYN 204
1243             SCW+FSTTG +E  +  +  K +SLSEQ LVDC      +        GCNGGL   A+
1244 Sbjct:  162 SCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNF--------GCNGGLPSQAFE 213
1245
1246 Query:  205 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTG 264
1247 pattern 237                                 ****
1248             YI  NGG+ TE +YPYT + G  C F+ ANIG +  + + N T+  + E   A  +V
1249 Sbjct:  214 YIKFNGGLDTEEAYPYTGKNGI-CKFSQANIGVKVISSV-NITLGAEYELKYAVALVR-- 269
1250
1251 Query:  265 PLAIAADAVE-WQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNS 320
1252             P+++A + V+ ++ Y  GV+   +    P  ++H +L VGY  +N       PYW++KNS
1253 Sbjct:  270 PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVEN-----GTPYWLIKNS 324
1254
1255 Query:  321 WGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
1256             WGADWGE GY  +  GKN CGV+   S  I+
1257 Sbjct:  325 WGADWGEDGYFKMEMGKNMCGVATCASYPIV 355
1258
1259
1260 >sp|Q05094|CYS2_LEIPI CYSTEINE PROTEINASE 2 PRECURSOR (AMASTIGOTE CYSTEINE PROTEINASE A-2)
1261           Length = 444
1262
1263  Score =  207 bits (521), Expect = 3e-53
1264  Identities = 122/327 (37%), Positives = 177/327 (53%), Gaps = 39/327 (11%)
1265
1266 Query:  29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKA---DTKFGVNKFADLS 84
1267             F EF+  + + Y    E  +R   F+ NL  + E       H+A     +FG+ KF DLS
1268 Sbjct:  38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMRE-------HQARNPHAQFGITKFFDLS 90
1269
1270 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEF--INSIPPEEQTAFDWRTRGAVTPVKNQGQ 142
1271               EF   YLN            A +       ++++P     A DWR +GAVTPVK+QG
1272 Sbjct:  91  EAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPD----AVDWREKGAVTPVKDQGA 146
1273
1274 Query:  143 CGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNA 202
1275             CGSCW+FS  GN+EGQ +++ ++LVSLSEQ LV CD            ++GC+GGL   A
1276 Sbjct:  147 CGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDD----------MNDGCDGGLMLQA 196
1277
1278 Query:  203 YNYIIK--NGGIQTESSYPYTAETG--TQCNFNSANIGPEEQAKISNFTMIPKNETVMAG 258
1279 pattern 237                                       ****
1280             ++++++  NG + TE SYPY +  G   +C+ +S  +     A+I    +I  +E  MA
1281 Sbjct:  197 FDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEEL--VVGAQIDGHVLIGSSEKAMAA 254
1282
1283 Query:  259 YIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVK 318
1284             ++   GP+AIA DA  +  Y  GV    C    L+HG+L+VGY     +     PYW++K
1285 Sbjct:  255 WLAKNGPIAIALDASSFMSYKSGVL-TACIGKQLNHGVLLVGYDMTGEV-----PYWVIK 308
1286
1287 Query:  319 NSWGADWGEQGYIYLRRGKNTCGVSNF 345
1288             NSWG DWGEQGY+ +  G N C +S +
1289 Sbjct:  309 NSWGGDWGEQGYVRVVMGVNACLLSEY 335
1290
1291
1292 >sp|P36400|LCPB_LEIME CYSTEINE PROTEINASE B PRECURSOR
1293           Length = 443
1294
1295  Score =  206 bits (520), Expect = 4e-53
1296  Identities = 122/327 (37%), Positives = 177/327 (53%), Gaps = 40/327 (12%)
1297
1298 Query:  29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKA---DTKFGVNKFADLS 84
1299             F EF+  + + Y    E  +R   F+ NL  + E       H+A     +FG+ KF DLS
1300 Sbjct:  38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMRE-------HQARNPHAQFGITKFFDLS 90
1301
1302 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEF--INSIPPEEQTAFDWRTRGAVTPVKNQGQ 142
1303               EF   YLN            A +       ++++P     A DWR +GAVTPVK+QG
1304 Sbjct:  91  EAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPD----AVDWREKGAVTPVKDQGA 146
1305
1306 Query:  143 CGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNA 202
1307             CGSCW+FS  GN+EGQ +++ ++LVSLSEQ LV CD            ++GC+GGL   A
1308 Sbjct:  147 CGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDD----------MNDGCDGGLMLQA 196
1309
1310 Query:  203 YNYIIK--NGGIQTESSYPYTAETG--TQCNFNSANIGPEEQAKISNFTMIPKNETVMAG 258
1311 pattern 237                                       ****
1312             ++++++  NG + TE SYPY +  G   +C+ +S  +     A+I    +I  +E  MA
1313 Sbjct:  197 FDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELV---VGAQIDGHVLIGSSEKAMAA 253
1314
1315 Query:  259 YIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVK 318
1316             ++   GP+AIA DA  +  Y  GV    C    L+HG+L+VGY     +     PYW++K
1317 Sbjct:  254 WLAKNGPIAIALDASSFMSYKSGVL-TACIGKQLNHGVLLVGYDMTGEV-----PYWVIK 307
1318
1319 Query:  319 NSWGADWGEQGYIYLRRGKNTCGVSNF 345
1320             NSWG DWGEQGY+ +  G N C +S +
1321 Sbjct:  308 NSWGGDWGEQGYVRVVMGVNACLLSEY 334
1322
1323
1324 >sp|P07711|CATL_HUMAN CATHEPSIN L PRECURSOR (MAJOR EXCRETED PROTEIN) (MEP)
1325           Length = 333
1326
1327  Score =  206 bits (520), Expect = 4e-53
1328  Identities = 125/349 (35%), Positives = 187/349 (52%), Gaps = 34/349 (9%)
1329
1330 Query:  8   VLAVFTVFVSSRGIPPEE--QSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLI 65
1331             +LA F + ++S  +  +   ++Q+ +++   N+ Y   E   R  +++ N+  IE  N
1332 Sbjct:  6   ILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQE 65
1333
1334 Query:  66  AINHKADTKFGVNKFADLSSDEFK---NYYLNNKEAIFTDDLPVADYLDDEFINSIPPEE 122
1335                 K      +N F D++S+EF+   N + N K                 F   +  E
1336 Sbjct:  66  YREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR-----------KGKVFQEPLFYEA 114
1337
1338 Query:  123 QTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECM 182
1339               + DWR +G VTPVKNQGQCGSCW+FS TG +EGQ F    +L+SLSEQNLVDC
1340 Sbjct:  115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDC----- 169
1341
1342 Query:  183 EYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAK 242
1343 pattern 237                                                       ****
1344                G +  +EGCNGGL   A+ Y+  NGG+ +E SYPY A T   C +N         A
1345 Sbjct:  170 --SGPQG-NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEA-TEESCKYNP----KYSVAN 221
1346
1347 Query:  243 ISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILIV 299
1348              + F  IPK E  +   + + GP+++A DA    + FY  G+ F+  C+   +DHG+L+V
1349 Sbjct:  222 DTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVV 281
1350
1351 Query:  300 GYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-KNTCGVSNFVS 347
1352             GY  ++T    N  YW+VKNSWG +WG  GY+ + +  +N CG+++  S
1353 Sbjct:  282 GYGFEST-ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329
1354
1355
1356 >sp|Q28944|CATL_PIG CATHEPSIN L PRECURSOR
1357           Length = 334
1358
1359  Score =  206 bits (519), Expect = 5e-53
1360  Identities = 121/316 (38%), Positives = 167/316 (52%), Gaps = 33/316 (10%)
1361
1362 Query:  40  YSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFK---NYYLNNK 96
1363             Y   E   R  +++ N+  IE  N      K      +N F D++++EF+   N + N K
1364 Sbjct:  40  YGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQK 99
1365
1366 Query:  97  EAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVE 156
1367                              F  S+  E   + DWR +G VT VKNQGQCGSCW+FS TG +E
1368 Sbjct:  100 HK-----------KGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALE 148
1369
1370 Query:  157 GQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTES 216
1371             GQ F    KLVSLSEQNLVDC       +G    ++GCNGGL  NA+ Y+  NGG+ TE
1372 Sbjct:  149 GQMFRKTGKLVSLSEQNLVDCSRP----QG----NQGCNGGLMDNAFQYVKDNGGLDTEE 200
1373
1374 Query:  217 SYPYTAETGTQCNFNSANIGPE-EQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--V 273
1375 pattern 237                     ** **
1376             SYPY       C +      PE   A  + F  IP+ E  +   + + GP+++A DA
1377 Sbjct:  201 SYPYLGRETNSCTYK-----PECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHS 255
1378
1379 Query:  274 EWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIY 332
1380              +QFY  G+ +D  C+   LDHG+L+VGY  + T    +  +WIVKNSWG +WG  GY+
1381 Sbjct:  256 SFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGT-DSNSSKFWIVKNSWGPEWGWNGYVK 314
1382
1383 Query:  333 LRRGKNT-CGVSNFVS 347
1384             + + +N  CG+S   S
1385 Sbjct:  315 MAKDQNNHCGISTAAS 330
1386
1387
1388 >sp|P00785|ACTN_ACTCH ACTINIDAIN PRECURSOR (ACTINIDIN)
1389           Length = 380
1390
1391  Score =  204 bits (513), Expect = 3e-52
1392  Identities = 124/334 (37%), Positives = 178/334 (53%), Gaps = 41/334 (12%)
1393
1394 Query:  24  EEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADT----KFGVN 78
1395             E ++ +  +  K+ K Y S  E+  RFEIFK  L  I+E       H ADT    K G+N
1396 Sbjct:  37  EVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDE-------HNADTNRSYKVGLN 89
1397
1398 Query:  79  KFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVK 138
1399             +FADL+ +EF++ YL       ++   V++  +  F   +P    +  DWR+ GAV  +K
1400 Sbjct:  90  QFADLTDEEFRSTYLGFTSG--SNKTKVSNRYEPRFGQVLP----SYVDWRSAGAVVDIK 143
1401
1402 Query:  139 NQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGL 198
1403             +QG+CG CW+FS    VEG + I    L+SLSEQ L+DC        G      GCNGG
1404 Sbjct:  144 SQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDC--------GRTQNTRGCNGGY 195
1405
1406 Query:  199 QPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAG 258
1407 pattern 237                                       ****
1408               + + +II NGGI TE +YPYTA+ G +CN +  N   E+   I  +  +P N
1409 Sbjct:  196 ITDGFQFIINNGGINTEENYPYTAQDG-ECNLDLQN---EKYVTIDTYENVPYNNEWALQ 251
1410
1411 Query:  259 YIVSTGPLAIAADAV--EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWI 316
1412               V+  P+++A DA    ++ Y  G+F  PC   ++DH + IVGY  +  I      YWI
1413 Sbjct:  252 TAVTYQPVSVALDAAGDAFKHYSSGIFTGPCG-TAIDHAVTIVGYGTEGGI-----DYWI 305
1414
1415 Query:  317 VKNSWGADWGEQGYIYLRR---GKNTCGVSNFVS 347
1416             VKNSW   WGE+GY+ + R   G  TCG++   S
1417 Sbjct:  306 VKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPS 339
1418
1419
1420 >sp|P25803|CYSP_PHAVU VIGNAIN PRECURSOR (BEAN ENDOPEPTIDASE) (CYSTEINE PROTEINASE EP-C1)
1421           Length = 362
1422
1423  Score =  203 bits (510), Expect = 6e-52
1424  Identities = 125/313 (39%), Positives = 177/313 (55%), Gaps = 35/313 (11%)
1425
1426 Query:  47  ERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDD 103
1427             +RF +FK+NL  +   N +   +K      +NKFAD+++ EF++ Y  +K     +F
1428 Sbjct:  58  KRFNVFKANLMHVHNTNKMDKPYKLK----LNKFADMTNHEFRSTYAGSKVNHPRMFRGT 113
1429
1430 Query:  104 LPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQ 163
1431                      E + S+PP    + DWR +GAVT VK+QGQCGSCW+FST   VEG + I
1432 Sbjct:  114 PHENGAFMYEKVVSVPP----SVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKT 169
1433
1434 Query:  164 NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 223
1435             NKLV+LSEQ LVDCD E          ++GCNGGL  +A+ +I + GGI TES+YPY A+
1436 Sbjct:  170 NKLVALSEQELVDCDKE---------ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQ 220
1437
1438 Query:  224 TGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGG 281
1439 pattern 237              ****
1440              GT C+ +  N   +    I     +P N+       V+  P+++A DA   ++QFY  G
1441 Sbjct:  221 EGT-CDASKVN---DLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEG 276
1442
1443 Query:  282 VFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG----K 337
1444             VF   C+   L+HG+ IVGY    T+   N  YWIV+NSWG +WGE GYI ++R     +
1445 Sbjct:  277 VFTGDCS-TDLNHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGEHGYIRMQRNISKKE 331
1446
1447 Query:  338 NTCGVSNFVSTSI 350
1448               CG++   S  I
1449 Sbjct:  332 GLCGIAMLPSYPI 344
1450
1451
1452 >sp|Q10991|CATL_SHEEP CATHEPSIN L
1453           Length = 217
1454
1455  Score =  201 bits (507), Expect = 1e-51
1456  Identities = 105/226 (46%), Positives = 139/226 (61%), Gaps = 23/226 (10%)
1457
1458 Query:  127 DWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEG 186
1459             DW  +G VTPVKNQGQCGSCW+FS TG +EGQ F    KLVSLSEQNLVD
1460 Sbjct:  6   DWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVD--------SS 57
1461
1462 Query:  187 EEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPE-EQAKISN 245
1463 pattern 237                                                   ** **
1464                 ++GCNGGL  NA+ YI +NGG+ +E SYPY A T T CN+      PE   AK +
1465 Sbjct:  58  RPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEA-TDTSCNYK-----PEYSAAKDTG 111
1466
1467 Query:  246 FTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILIVGYS 302
1468             F  IP+ E  +   + + GP+++A DA    +QFY  G+ +D  C+   LDHG+L+VGY
1469 Sbjct:  112 FVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYG 171
1470
1471 Query:  303 AKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT-CGVSNFVS 347
1472              + T    N  +WIVKNSWG +WG +GY+ + + +N  CG++   S
1473 Sbjct:  172 FEGT----NNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAAS 213
1474
1475
1476 >sp|P43156|CYSP_HEMSP THIOL PROTEASE SEN102 PRECURSOR
1477           Length = 360
1478
1479  Score =  201 bits (506), Expect = 2e-51
1480  Identities = 121/307 (39%), Positives = 161/307 (52%), Gaps = 28/307 (9%)
1481
1482 Query:  43  EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTD 102
1483             +E   RF +FK N+  I E N       A  K  +NKF D+++ EF++ Y  +K
1484 Sbjct:  54  DEKNRRFNVFKENVKFIHEFNQ---KKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRS 110
1485
1486 Query:  103 DLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFIS 162
1487                +          ++      + DWR +GAVT VK+QGQCGSCW+FST  +VEG + I
1488 Sbjct:  111 QRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIK 170
1489
1490 Query:  163 QNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTA 222
1491               +LVSLSEQ LVDCD          + +EGCNGGL   A+ +I KN GI TE SYPY
1492 Sbjct:  171 TGELVSLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAE 220
1493
1494 Query:  223 ETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIG 280
1495 pattern 237               ****
1496             + GT C  N  N        I     +P N        V+  P++++ +A    +QFY
1497 Sbjct:  221 QDGT-CASNLLN---SPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSE 276
1498
1499 Query:  281 GVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG---- 336
1500             GVF   C    LDHG+ IVGY A     R    YWIVKNSWG +WGE GYI ++RG
1501 Sbjct:  277 GVFTGRCG-TELDHGVAIVGYGAT----RDGTKYWIVKNSWGEEWGESGYIRMQRGISDK 331
1502
1503 Query:  337 KNTCGVS 343
1504             +  CG++
1505 Sbjct:  332 RGKCGIA 338
1506
1507
1508 >sp|P54639|CYS4_DICDI CYSTEINE PROTEINASE 4 PRECURSOR
1509           Length = 442
1510
1511  Score =  200 bits (504), Expect = 3e-51
1512  Identities = 117/308 (37%), Positives = 169/308 (53%), Gaps = 32/308 (10%)
1513
1514 Query:  4   ILLFVLAVFTVFVSSRGIPPEEQ--SQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEE 61
1515             +L F+  +   + S++    E Q  + F  +     + YS EE+  R++IFKSN+  + +
1516 Sbjct:  3   VLSFLCLLLVSYASAKQQFSELQYRNAFTNWMQAHQRTYSSEEFNARYQIFKSNMDYVHQ 62
1517
1518 Query:  62  LNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPE 121
1519              N    +   +T  G+N FAD+++ E++  YL      F     +    ++E I S P
1520 Sbjct:  63  WN----SKGGETVLGLNVFADITNQEYRTTYLGTP---FDGSALIGT--EEEKIFSTPAP 113
1521
1522 Query:  122 EQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFI---SQNKLVSLSEQNLVDCD 178
1523                  DWR +GAVTP+KNQGQCG CWSFSTTG+ EG HFI   ++  LVSLSEQNL+DC
1524 Sbjct:  114 ---TVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDC- 169
1525
1526 Query:  179 HECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPE 238
1527 pattern 237                                                           **
1528                     +   + GC GGL    + YII N GI TESSYPYTAE G +C F ++NIG
1529 Sbjct:  170 -------SKSYGNNGCEGGLMTLGFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIG-- 220
1530
1531 Query:  239 EQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIP-CNPNSLDHG 295
1532 pattern 239 **
1533               A+I ++  +            +  P+++A DA    +Q Y  G++  P C P  LDHG
1534 Sbjct:  221 --AQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACTPTQLDHG 278
1535
1536 Query:  296 ILIVGYSA 303
1537             +L+VGY +
1538 Sbjct:  279 VLVVGYGS 286
1539
1540
1541  Score = 48.8 bits (114), Expect = 2e-05
1542  Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
1543
1544 Query: 314 YWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
1545            YWIVKNSWG  WG  GYI++ + + N CG++   S
1546 Sbjct: 401 YWIVKNSWGTSWGMDGYIFMSKDRNNNCGIATMAS 435
1547
1548
1549 >sp|O60911|CATM_HUMAN CATHEPSIN L2 PRECURSOR (CATHEPSIN V)
1550           Length = 334
1551
1552  Score =  199 bits (501), Expect = 7e-51
1553  Identities = 127/357 (35%), Positives = 191/357 (52%), Gaps = 43/357 (12%)
1554
1555 Query:  5   LLFVLAVFTVFVSSRGIPPEEQS---QFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEE 61
1556             L  VLA F + ++S  +P  +Q+   ++ +++    + Y   E   R  +++ N+  IE
1557 Sbjct:  3   LSLVLAAFCLGIAS-AVPKFDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIEL 61
1558
1559 Query:  62  LNLIAINHKADTKFGVNKFADLSSDEFKNY---YLNNK---EAIFTDDLPVADYLDDEFI 115
1560              N      K      +N F D++++EF+     + N K     +F + L    +LD
1561 Sbjct:  62  HNGEYSQGKHGFTMAMNAFPDMTNEEFRQMMGCFRNQKFRKGKVFREPL----FLD---- 113
1562
1563 Query:  116 NSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLV 175
1564               +P     + DWR +G VTPVKNQ QCGSCW+FS TG +EGQ F    KLVSLSEQNLV
1565 Sbjct:  114 --LPK----SVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLV 167
1566
1567 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANI 235
1568             DC       +G    ++GCNGG    A+ Y+ +NGG+ +E SYPY A     C +   N
1569 Sbjct:  168 DCSRP----QG----NQGCNGGFMARAFQYVKENGGLDSEESYPYVA-VDEICKYRPEN- 217
1570
1571 Query:  236 GPEEQAKISNFTMI-PKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNS 291
1572 pattern 237  ****
1573                  A  + FT++ P  E  +   + + GP+++A DA    +QFY  G+ F+  C+  +
1574 Sbjct:  218 ---SVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKN 274
1575
1576 Query:  292 LDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT-CGVSNFVS 347
1577             LDHG+L+VGY  +      N  YW+VKNSWG +WG  GY+ + + KN  CG++   S
1578 Sbjct:  275 LDHGVLVVGYGFEGA-NSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAAS 330
1579
1580
1581 >sp|O10364|CATV_NPVOP VIRAL CATHEPSIN (V-CATH)
1582           Length = 324
1583
1584  Score =  196 bits (494), Expect = 5e-50
1585  Identities = 116/322 (36%), Positives = 168/322 (52%), Gaps = 30/322 (9%)
1586
1587 Query:  29  FLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
1588             F +F  KFNK YS E E L RF+IF+ NL +I   N     + +  ++ +NKF+DLS +E
1589 Sbjct:  28  FEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKN----QNDSTAQYEINKFSDLSKEE 83
1590
1591 Query:  88  FKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCW 147
1592               + Y        T +      LD       P      FDWR    VT VKNQG CG+CW
1593 Sbjct:  84  AISKYTGLSLPHQTQNFCEVVILDRP-----PDRGPLEFDWRQFNKVTSVKNQGVCGACW 138
1594
1595 Query:  148 SFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYII 207
1596             +F+T G++E Q  I  N+L++LSEQ  +DCD            + GC+GGL   A+   +
1597 Sbjct:  139 AFATLGSLESQFAIKYNRLINLSEQQFIDCDR----------VNAGCDGGLLHTAFESAM 188
1598
1599 Query:  208 KNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLA 267
1600 pattern 237                              ****
1601             + GG+Q ES YPY    G QC  N        ++      M    E  +   + + GP+
1602 Sbjct:  189 EMGGVQMESDYPYETANG-QCRINPNRFVVGVRSCRRYIVMF---EEKLKDLLRAVGPIP 244
1603
1604 Query:  268 IAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGE 327
1605             +A DA +   Y  G+    C  + L+H +L+VGY+ +N     N+PYWI+KN+WG DWGE
1606 Sbjct:  245 VAIDASDIVNYRRGIMR-QCANHGLNHAVLLVGYAVEN-----NIPYWILKNTWGTDWGE 298
1607
1608 Query:  328 QGYIYLRRGKNTCGVSNFVSTS 349
1609              GY  +++  N CG+ N + +S
1610 Sbjct:  299 DGYFRVQQNINACGIRNELVSS 320
1611
1612
1613 >sp|P25777|ORYB_ORYSA ORYZAIN BETA CHAIN PRECURSOR
1614           Length = 471
1615
1616  Score =  196 bits (494), Expect = 5e-50
1617  Identities = 115/310 (37%), Positives = 166/310 (53%), Gaps = 31/310 (10%)
1618
1619 Query:  44  EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDD 103
1620             E+  RF +F  NL  ++  N  A +     + G+N+FADL+++EF+  +L  K A
1621 Sbjct:  69  EHERRFLVFWDNLKFVDAHNARA-DEGGGFRLGMNRFADLTNEEFRATFLGAKVA--ERS 125
1622
1623 Query:  104 LPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQ 163
1624                 +    + +  +P     + DWR +GAV PVKNQGQCGSCW+FS    VE  + +
1625 Sbjct:  126 RAAGERYRHDGVEELPE----SVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVT 181
1626
1627 Query:  164 NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 223
1628              ++++LSEQ LV+C             + GCNGGL  +A+++IIKNGGI TE  YPY A
1629 Sbjct:  182 GEMITLSEQELVEC--------STNGQNSGCNGGLMADAFDFIIKNGGIDTEDDYPYKAV 233
1630
1631 Query:  224 TGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGG 281
1632 pattern 237              ****
1633              G +C+ N  N    +   I  F  +P+N+       V+  P+++A +A   E+Q Y  G
1634 Sbjct:  234 DG-KCDINREN---AKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSG 289
1635
1636 Query:  282 VFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT-- 339
1637             VF   C   SLDHG++ VGY   N        YWIV+NSWG  WGE GY+ + R  N
1638 Sbjct:  290 VFSGRCG-TSLDHGVVAVGYGTDN-----GKDYWIVRNSWGPKWGESGYVRMERNINVTT 343
1639
1640 Query:  340 --CGVSNFVS 347
1641               CG++   S
1642 Sbjct:  344 GKCGIAMMAS 353
1643
1644
1645 >sp|P25776|ORYA_ORYSA ORYZAIN ALPHA CHAIN PRECURSOR
1646           Length = 458
1647
1648  Score =  194 bits (488), Expect = 2e-49
1649  Identities = 124/355 (34%), Positives = 183/355 (50%), Gaps = 43/355 (12%)
1650
1651 Query:  3   VILLFVLAVFTVFVSSRGIPPEEQSQ--FLEFQDKFNKKYSHE-EYLERFEIFKSNLGKI 59
1652             ++LL  LA   + + S G   EE+++  + E++ +  K Y+   E   R+  F+ NL  I
1653 Sbjct:  12  LLLLLSLAAADMSIVSYGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYI 71
1654
1655 Query:  60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-----NKEAIFTDDLPVADYLDDEF 114
1656             +E N  A       + G+N+FADL+++E+++ YL       +E   +D    AD
1657 Sbjct:  72  DEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAAD------ 125
1658
1659 Query:  115 INSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNL 174
1660              N   PE   + DWRT+GAV  +K+QG CGSCW+FS    VE  + I    L+SLSEQ L
1661 Sbjct:  126 -NEALPE---SVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQEL 181
1662
1663 Query:  175 VDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSAN 234
1664             VDCD          + +EGCNGGL   A+++II NGGI TE  YPY  +   +C+ N  N
1665 Sbjct:  182 VDCD---------TSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGK-DERCDVNRKN 231
1666
1667 Query:  235 IGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIPCNPNSL 292
1668 pattern 237   ****
1669                 +   I ++  +  N        V   P+++A +A    +Q Y  G+F   C   +L
1670 Sbjct:  232 ---AKVVTIDSYEDVTPNSETSLQKAVRNQPVSVAIEAGGRAFQLYSSGIFTGKCG-TAL 287
1671
1672 Query:  293 DHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR----GKNTCGVS 343
1673             DHG+  VGY  +N        YWIV+NSWG  WGE GY+ + R        CG++
1674 Sbjct:  288 DHGVAAVGYGTEN-----GKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIA 337
1675
1676
1677 >sp|P43297|RD21_ARATH CYSTEINE PROTEINASE RD21A PRECURSOR
1678           Length = 462
1679
1680  Score =  193 bits (486), Expect = 4e-49
1681  Identities = 122/321 (38%), Positives = 168/321 (52%), Gaps = 43/321 (13%)
1682
1683 Query:  35  KFNKKYSHEEYLE---RFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNY 91
1684             K  K  S    +E   RFEIFK NL  ++E N   ++++     G+ +FADL++DE+++
1685 Sbjct:  56  KHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYR----LGLTRFADLTNDEYRSK 111
1686
1687 Query:  92  YLN---NKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWS 148
1688             YL     K+      L     + DE   SI        DWR +GAV  VK+QG CGSCW+
1689 Sbjct:  112 YLGAKMEKKGERRTSLRYEARVGDELPESI--------DWRKKGAVAEVKDQGGCGSCWA 163
1690
1691 Query:  149 FSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIK 208
1692             FST G VEG + I    L++LSEQ LVDCD          + +EGCNGGL   A+ +IIK
1693 Sbjct:  164 FSTIGAVEGINQIVTGDLITLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIK 214
1694
1695 Query:  209 NGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAI 268
1696 pattern 237                             ****
1697             NGGI T+  YPY    GT C+    N    +   I ++  +P          V+  P++I
1698 Sbjct:  215 NGGIDTDKDYPYKGVDGT-CDQIRKN---AKVVTIDSYEDVPTYSEESLKKAVAHQPISI 270
1699
1700 Query:  269 AADA--VEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWG 326
1701             A +A    +Q Y  G+FD  C    LDHG++ VGY  +N        YWIV+NSWG  WG
1702 Sbjct:  271 AIEAGGRAFQLYDSGIFDGSCG-TQLDHGVVAVGYGTEN-----GKDYWIVRNSWGKSWG 324
1703
1704 Query:  327 EQGYIYLRR----GKNTCGVS 343
1705             E GY+ + R        CG++
1706 Sbjct:  325 ESGYLRMARNIASSSGKCGIA 345
1707
1708
1709 >sp|Q10717|CYS2_MAIZE CYSTEINE PROTEINASE 2 PRECURSOR
1710           Length = 360
1711
1712  Score =  193 bits (485), Expect = 5e-49
1713  Identities = 115/329 (34%), Positives = 172/329 (51%), Gaps = 32/329 (9%)
1714
1715 Query:  28  QFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSD 86
1716             +F  F  ++ K Y S  E  +RF IF  +L  +   N   ++++     G+N+FAD+S +
1717 Sbjct:  58  RFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYR----LGINRFADMSWE 113
1718
1719 Query:  87  EFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSC 146
1720             EF+   L   +         A    +  + +         DWR  G V+PVKNQG CGSC
1721 Sbjct:  114 EFRATRLGAAQNCS------ATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSC 167
1722
1723 Query:  147 WSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYI 206
1724             W+FSTTG +E  +  +  K +SLSEQ LVDC      +        GCNGGL   A+ YI
1725 Sbjct:  168 WTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNF--------GCNGGLPSQAFEYI 219
1726
1727 Query:  207 IKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
1728 pattern 237                               ****
1729               NGG+ TE SYPY    G  C F + N+G +    + N T+  ++E   A  +V   P+
1730 Sbjct:  220 KYNGGLDTEESYPYQGVNGI-CKFKNENVGVKVLDSV-NITLGAEDELKDAVGLVR--PV 275
1731
1732 Query:  267 AIAADAVE-WQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWG 322
1733             ++A + +  ++ Y  GV+        P  ++H +L VGY  ++      +PYW++KNSWG
1734 Sbjct:  276 SVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVED-----GVPYWLIKNSWG 330
1735
1736 Query:  323 ADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
1737             ADWG++GY  +  GKN CGV+   S  I+
1738 Sbjct:  331 ADWGDEGYFKMEMGKNMCGVATCASYPIV 359
1739
1740
1741 >sp|P14080|PAP2_CARPA CHYMOPAPAIN PRECURSOR (PAPAYA PROTEINASE II) (PPII)
1742           Length = 352
1743
1744  Score =  192 bits (482), Expect = 1e-48
1745  Identities = 128/319 (40%), Positives = 169/319 (52%), Gaps = 43/319 (13%)
1746
1747 Query:  35  KFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKF--GVNKFADLSSDEFKNY 91
1748             K NK Y S +E + RFEIF+ NL  I+E N      K +  +  G+N FADLS+DEFK
1749 Sbjct:  54  KHNKIYESIDEKIYRFEIFRDNLMYIDETN------KKNNSYWLGLNGFADLSNDEFKKK 107
1750
1751 Query:  92  YLNNKEAIFTDDLPVADYLDDE-FINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFS 150
1752             Y+        +D    ++ D+E F          + DWR +GAVTPVKNQG CGSCW+FS
1753 Sbjct:  108 YVG----FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFS 163
1754
1755 Query:  151 TTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNG 210
1756             T   VEG + I    L+ LSEQ LVDCD              GC GG Q  +  Y + N
1757 Sbjct:  164 TIATVEGINKIVTGNLLELSEQELVDCDKH----------SYGCKGGYQTTSLQY-VANN 212
1758
1759 Query:  211 GIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKN-ETVMAGYIVSTGPLAIA 269
1760 pattern 237                           ****
1761             G+ T   YPY A+   +C    A   P  + KI+ +  +P N ET   G + +  PL++
1762 Sbjct:  213 GVHTSKVYPYQAKQ-YKCR---ATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVL 267
1763
1764 Query:  270 ADA--VEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGE 327
1765              +A    +Q Y  GVFD PC    LDH +  VGY   +    KN  Y I+KNSWG +WGE
1766 Sbjct:  268 VEAGGKPFQLYKSGVFDGPCG-TKLDHAVTAVGYGTSD---GKN--YIIIKNSWGPNWGE 321
1767
1768 Query:  328 QGYIYLRR----GKNTCGV 342
1769             +GY+ L+R     + TCGV
1770 Sbjct:  322 KGYMRLKRQSGNSQGTCGV 340
1771
1772
1773 >sp|P00786|CATH_RAT CATHEPSIN H PRECURSOR (CATHEPSIN B3) (CATHEPSIN BA)
1774           Length = 333
1775
1776  Score =  192 bits (482), Expect = 1e-48
1777  Identities = 121/333 (36%), Positives = 173/333 (51%), Gaps = 38/333 (11%)
1778
1779 Query:  25  EQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84
1780             E+  F  +  +  K YS  EY  R ++F +N  KI+  N    NH    K G+N+F+D+S
1781 Sbjct:  29  EKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHN--QRNHTF--KMGLNQFSDMS 84
1782
1783 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRG-AVTPVKNQGQC 143
1784               E K+ YL ++                 ++    P   ++ DWR +G  V+PVKNQG C
1785 Sbjct:  85  FAEIKHKYLWSEPQN-------CSATKSNYLRGTGPYP-SSMDWRKKGNVVSPVKNQGAC 136
1786
1787 Query:  144 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 203
1788             GSCW+FSTTG +E    I+  K+++L+EQ LVDC         +   + GC GGL   A+
1789 Sbjct:  137 GSCWTFSTTGALESAVAIASGKMMTLAEQQLVDC--------AQNFNNHGCQGGLPSQAF 188
1790
1791 Query:  204 NYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ-AKISNFTMIPKN-ETVMAGYIV 261
1792 pattern 237                                  ****
1793              YI+ N GI  E SYPY  + G QC FN     PE+  A + N   I  N E  M   +
1794 Sbjct:  189 EYILYNKGIMGEDSYPYIGKNG-QCKFN-----PEKAVAFVKNVVNITLNDEAAMVEAVA 242
1795
1796 Query:  262 STGPLAIAADAVE-WQFYIGGVFDI-PCN--PNSLDHGILIVGYSAKNTIFRKNMPYWIV 317
1797                P++ A +  E +  Y  GV+    C+  P+ ++H +L VGY  +N +      YWIV
1798 Sbjct:  243 LYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL-----YWIV 297
1799
1800 Query:  318 KNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
1801             KNSWG++WG  GY  + RGKN CG++   S  I
1802 Sbjct:  298 KNSWGSNWGNNGYFLIERGKNMCGLAACASYPI 330
1803
1804
1805 >sp|P25251|CYS4_BRANA CYSTEINE PROTEINASE COT44 PRECURSOR
1806           Length = 328
1807
1808  Score =  190 bits (477), Expect = 5e-48
1809  Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 29/304 (9%)
1810
1811 Query:  47  ERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV 106
1812             ERF IFK NL  I+  N    N  A  K G+  FA+L++DE+++ YL  +       +
1813 Sbjct:  27  ERFNIFKDNLRFIDLHN--ENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRR-ITK 83
1814
1815 Query:  107 ADYLDDEFINSIPPEE-QTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNK 165
1816             A  ++ ++  ++  +E     DWR +GAV  +K+QG CGSCW+FST   VEG + I   +
1817 Sbjct:  84  AKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGE 143
1818
1819 Query:  166 LVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETG 225
1820             LVSLSEQ LVDCD         ++ ++GCNGGL   A+ +I+KNGG+ TE  YPY    G
1821 Sbjct:  144 LVSLSEQELVDCD---------KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNG 194
1822
1823 Query:  226 TQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVF 283
1824 pattern 237            ****
1825              +CN    N        I  +  +P  +       VS  P+++A DA    +Q Y  G+F
1826 Sbjct:  195 -KCNSLLKN---SRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIF 250
1827
1828 Query:  284 DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG----KNT 339
1829                C  N +DH ++ VGY ++N      + YWIV+NSWG  WGE GYI + R
1830 Sbjct:  251 TGKCGTN-MDHAVVAVGYGSEN-----GVDYWIVRNSWGTRWGEDGYIRMERNVASKSGK 304
1831
1832 Query:  340 CGVS 343
1833             CG++
1834 Sbjct:  305 CGIA 308
1835
1836
1837 >sp|P09668|CATH_HUMAN CATHEPSIN H PRECURSOR
1838           Length = 335
1839
1840  Score =  188 bits (472), Expect = 2e-47
1841  Identities = 123/332 (37%), Positives = 170/332 (51%), Gaps = 36/332 (10%)
1842
1843 Query:  25  EQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84
1844             E+  F  +  K  K YS EEY  R + F SN  KI   N    N     K  +N+F+D+S
1845 Sbjct:  31  EKFHFKSWMSKHRKTYSTEEYHHRLQTFASNWRKINAHN----NGNHTFKMALNQFSDMS 86
1846
1847 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGA-VTPVKNQGQC 143
1848               E K+ YL ++          ++YL        PP    + DWR +G  V+PVKNQG C
1849 Sbjct:  87  FAEIKHKYLWSEPQ--NCSATKSNYLRGT--GPYPP----SVDWRKKGNFVSPVKNQGAC 138
1850
1851 Query:  144 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 203
1852             GSCW+FSTTG +E    I+  K++SL+EQ LVDC  +   Y        GC GGL   A+
1853 Sbjct:  139 GSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNY--------GCQGGLPSQAF 190
1854
1855 Query:  204 NYIIKNGGIQTESSYPYTAETGTQCNFNSAN-IGPEEQAKISNFTMIPKNETVMAGYIVS 262
1856 pattern 237                                   ****
1857              YI+ N GI  E +YPY  + G  C F     IG  +   ++N T+   +E  M   +
1858 Sbjct:  191 EYILYNKGIMGEDTYPYQGKDG-YCKFQPGKAIGFVKD--VANITIY--DEEAMVEAVAL 245
1859
1860 Query:  263 TGPLAIAADAV-EWQFYIGGVF-DIPCN--PNSLDHGILIVGYSAKNTIFRKNMPYWIVK 318
1861               P++ A +   ++  Y  G++    C+  P+ ++H +L VGY  KN I     PYWIVK
1862 Sbjct:  246 YNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGI-----PYWIVK 300
1863
1864 Query:  319 NSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
1865             NSWG  WG  GY  + RGKN CG++   S  I
1866 Sbjct:  301 NSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332
1867
1868
1869 >sp|P10056|PAP3_CARPA CARICAIN PRECURSOR (PAPAYA PROTEINASE OMEGA) (PAPAYA PROTEINASE III)
1870             (PPIII) (PAPAYA PEPTIDASE A)
1871           Length = 348
1872
1873  Score =  187 bits (471), Expect = 2e-47
1874  Identities = 121/319 (37%), Positives = 161/319 (49%), Gaps = 38/319 (11%)
1875
1876 Query:  37  NKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKF--GVNKFADLSSDEFKNYYL 93
1877             NK Y + +E L RFEIFK NL  I+E N      K +  +  G+N+FADLS+DEF   Y+
1878 Sbjct:  56  NKFYENVDEKLYRFEIFKDNLNYIDETN------KKNNSYWLGLNEFADLSNDEFNEKYV 109
1879
1880 Query:  94  NNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTG 153
1881              +       D  +    D+EFIN          DWR +GAVTPV++QG CGSCW+FS
1882 Sbjct:  110 GS-----LIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVA 164
1883
1884 Query:  154 NVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ 213
1885              VEG + I   KLV LSEQ LVDC+              GC GG  P A  Y+ KN GI
1886 Sbjct:  165 TVEGINKIRTGKLVELSEQELVDCERR----------SHGCKGGYPPYALEYVAKN-GIH 213
1887
1888 Query:  214 TESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAV 273
1889 pattern 237                        ****
1890               S YPY A+ GT C       GP    K S    +  N        ++  P+++  ++
1891 Sbjct:  214 LRSKYPYKAKQGT-CRAKQVG-GP--IVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESK 269
1892
1893 Query:  274 --EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYI 331
1894                +Q Y GG+F+ PC    +DH +  VGY            Y ++KNSWG  WGE+GYI
1895 Sbjct:  270 GRPFQLYKGGIFEGPCG-TKVDHAVTAVGYGKSG-----GKGYILIKNSWGTAWGEKGYI 323
1896
1897 Query:  332 YLRRGK-NTCGVSNFVSTS 349
1898              ++R   N+ GV     +S
1899 Sbjct:  324 RIKRAPGNSPGVCGLYKSS 342
1900
1901
1902 >sp|P25778|ORYC_ORYSA ORYZAIN GAMMA CHAIN PRECURSOR
1903           Length = 362
1904
1905  Score =  187 bits (471), Expect = 2e-47
1906  Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 33/329 (10%)
1907
1908 Query:  28  QFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSD 86
1909             +F  F  +  K+Y    E   RF IF  +L  +   N   + ++     G+N+FAD+S +
1910 Sbjct:  61  RFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYR----LGINRFADMSWE 116
1911
1912 Query:  87  EFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSC 146
1913             EF+   L   +         A    +  +   P   +T  DWR  G V+PVK+QG CGSC
1914 Sbjct:  117 EFQASRLGAAQNCS------ATLAGNHRMRDAPALPETK-DWREDGIVSPVKDQGHCGSC 169
1915
1916 Query:  147 WSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYI 206
1917             W FSTTG++E ++  +    VSLSEQ L DC      +        GC+GGL   A+ YI
1918 Sbjct:  170 WPFSTTGSLEARYTQATGPPVSLSEQQLADCATRYNNF--------GCSGGLPSQAFEYI 221
1919
1920 Query:  207 IKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
1921 pattern 237                               ****
1922               NGG+ TE +YPYT   G  C++   N G +    + N T++ ++E   A  +V   P+
1923 Sbjct:  222 KYNGGLDTEEAYPYTGVNGI-CHYKPENAGVKVLDSV-NITLVAEDELKNAVGLVR--PV 277
1924
1925 Query:  267 AIAADAVE-WQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWG 322
1926             ++A   +  ++ Y  GV+       +P  ++H +L VGY  +N      +PYW++KNSWG
1927 Sbjct:  278 SVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN-----GVPYWLIKNSWG 332
1928
1929 Query:  323 ADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
1930             ADWG+ GY  +  GKN CG++   S  I+
1931 Sbjct:  333 ADWGDNGYFTMEMGKNMCGIATCASYPIV 361
1932
1933
1934 >sp|P15242|TES1_RAT TESTIN 1/2 PRECURSOR (CMB-22/CMB-23)
1935           Length = 333
1936
1937  Score =  187 bits (469), Expect = 4e-47
1938  Identities = 115/356 (32%), Positives = 184/356 (51%), Gaps = 30/356 (8%)
1939
1940 Query:  3   VILLFVLAVFTVFVSSRGIPPEEQS--QFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
1941             +I +  LA+  + V S    P+     ++ E++ K  K Y+  E   +  +++ N   IE
1942 Sbjct:  1   MIAVLFLAILCLEVDSTAPTPDPSLDVEWNEWRTKHGKTYNMNEERLKRAVWEKNFKMIE 60
1943
1944 Query:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIP 119
1945               N   +  + D    +N F DL++ EF        ++ I    +    + D +F+  +P
1946 Sbjct:  61  LHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHI----FQDHQFLY-VP 115
1947
1948 Query:  120 PEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDH 179
1949                    DWR  G VTPVKNQG C S W+FS TG++EGQ F    +L+ LSEQNL+DC
1950 Sbjct:  116 KR----VDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMG 171
1951
1952 Query:  180 ECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEE 239
1953 pattern 237                                                          ***
1954               + +        GC+GG    A+ Y+  NGG+ TE SYPY  + G +C +++ N
1955 Sbjct:  172 SNVTH--------GCSGGFMQYAFQYVKDNGGLATEESYPYRGQ-GRECRYHAEN----S 218
1956
1957 Query:  240 QAKISNFTMIPKNETVMAGYIVSTGPLAIAADAV--EWQFYIGGVFDIP-CNPNSLDHGI 296
1958 pattern 240 *
1959              A + +F  IP +E  +   +   GP+++A DA    +QFY  G++  P C    L+H +
1960 Sbjct:  219 AANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAV 278
1961
1962 Query:  297 LIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-KNTCGVSNFVSTSII 351
1963             L+VGY  +      N  +W+VKNSWG +WG +GY+ L +   N CG++ + +  I+
1964 Sbjct:  279 LVVGYGFEGEESDGN-SFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333
1965
1966
1967 >sp|O46427|CATH_PIG CATHEPSIN H PRECURSOR
1968           Length = 335
1969
1970  Score =  186 bits (468), Expect = 5e-47
1971  Identities = 124/343 (36%), Positives = 176/343 (51%), Gaps = 42/343 (12%)
1972
1973 Query:  17  SSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFG 76
1974             S+  +   E+  F  +  +  KKYS EEY  R ++F SN  KI   N  A NH    K G
1975 Sbjct:  23  SNLAVSSFEKLHFKSWMVQHQKKYSLEEYHHRLQVFVSNWRKINAHN--AGNHTF--KLG 78
1976
1977 Query:  77  VNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGA-VT 135
1978             +N+F+D+S DE ++ YL ++           +YL        PP    + DWR +G  V+
1979 Sbjct:  79  LNQFSDMSFDEIRHKYLWSEPQ--NCSATKGNYLRGT--GPYPP----SMDWRKKGNFVS 130
1980
1981 Query:  136 PVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCN 195
1982             PVKNQG CGSCW+FSTTG +E    I+  K++SL+EQ LVDC         +   + GC
1983 Sbjct:  131 PVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDC--------AQNFNNHGCQ 182
1984
1985 Query:  196 GGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ----AKISNFTMIPK 251
1986 pattern 237                                          ****
1987             GGL   A+ YI  N GI  E +YPY  +    C F      P++       ++N TM
1988 Sbjct:  183 GGLPSQAFEYIRYNKGIMGEDTYPYKGQ-DDHCKFQ-----PDKAIAFVKDVANITM--N 234
1989
1990 Query:  252 NETVMAGYIVSTGPLAIAADAV-EWQFYIGGVF-DIPCN--PNSLDHGILIVGYSAKNTI 307
1991             +E  M   +    P++ A +   ++  Y  G++    C+  P+ ++H +L VGY  +N I
1992 Sbjct:  235 DEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGI 294
1993
1994 Query:  308 FRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
1995                  PYWIVKNSWG  WG  GY  + RGKN CG++   S  I
1996 Sbjct:  295 -----PYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332
1997
1998
1999 >sp|P05167|ALEU_HORVU THIOL PROTEASE ALEURAIN PRECURSOR
2000           Length = 362
2001
2002  Score =  185 bits (466), Expect = 9e-47
2003  Identities = 111/329 (33%), Positives = 169/329 (50%), Gaps = 33/329 (10%)
2004
2005 Query:  28  QFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSD 86
2006             +F  F  ++ K Y S  E   RF IF  +L ++   N   + ++     G+N+F+D+S +
2007 Sbjct:  60  RFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYR----LGINRFSDMSWE 115
2008
2009 Query:  87  EFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSC 146
2010             EF+   L   +         A    +  +       +T  DWR  G V+PVKNQ  CGSC
2011 Sbjct:  116 EFQATRLGAAQTCS------ATLAGNHLMRDAAALPETK-DWREDGIVSPVKNQAHCGSC 168
2012
2013 Query:  147 WSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYI 206
2014             W+FSTTG +E  +  +  K +SLSEQ LVDC      +        GCNGGL   A+ YI
2015 Sbjct:  169 WTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNF--------GCNGGLPSQAFEYI 220
2016
2017 Query:  207 IKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
2018 pattern 237                               ****
2019               NGGI TE SYPY    G  C++ + N   +    + N T+  ++E   A  +V   P+
2020 Sbjct:  221 KYNGGIDTEESYPYKGVNGV-CHYKAENAAVQVLDSV-NITLNAEDELKNAVGLVR--PV 276
2021
2022 Query:  267 AIAADAVE-WQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWG 322
2023             ++A   ++ ++ Y  GV+        P+ ++H +L VGY  +N      +PYW++KNSWG
2024 Sbjct:  277 SVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN-----GVPYWLIKNSWG 331
2025
2026 Query:  323 ADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
2027             ADWG+ GY  +  GKN C ++   S  ++
2028 Sbjct:  332 ADWGDNGYFKMEMGKNMCAIATCASYPVV 360
2029
2030
2031 >sp|P43235|CATK_HUMAN CATHEPSIN K PRECURSOR (CATHEPSIN O) (CATHEPSIN X) (CATHEPSIN O2)
2032           Length = 329
2033
2034  Score =  185 bits (465), Expect = 1e-46
2035  Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 39/350 (11%)
2036
2037 Query:  9   LAVFTVFVSSRGIPPEE--QSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLI 65
2038             L V  + V S  + PEE   + +  ++    K+Y+++ + + R  I++ NL  I   NL
2039 Sbjct:  4   LKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLE 63
2040
2041 Query:  66  AINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTA 125
2042             A       +  +N   D++S+E        K       +P++    ++ +  IP  E  A
2043 Sbjct:  64  ASLGVHTYELAMNHLGDMTSEEVVQKMTGLK-------VPLSHSRSNDTLY-IPEWEGRA 115
2044
2045 Query:  126 ---FDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECM 182
2046                 D+R +G VTPVKNQGQCGSCW+FS+ G +EGQ      KL++LS QNLVDC  E
2047 Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE-- 173
2048
2049 Query:  183 EYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAK 242
2050 pattern 237                                                       ****
2051                     ++GC GG   NA+ Y+ KN GI +E +YPY  +    C +N       + AK
2052 Sbjct:  174 --------NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTG----KAAK 220
2053
2054 Query:  243 ISNFTMIPK-NETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILI 298
2055                +  IP+ NE  +   +   GP+++A DA    +QFY  GV +D  CN ++L+H +L
2056 Sbjct:  221 CRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLA 280
2057
2058 Query:  299 VGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
2059             VGY       +K   +WI+KNSWG +WG +GYI + R K N CG++N  S
2060 Sbjct:  281 VGYG-----IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325
2061
2062
2063 >sp|P05994|PAP4_CARPA PAPAYA PROTEINASE IV PRECURSOR (PPIV) (PAPAYA PEPTIDASE B) (GLYCYL
2064             ENDOPEPTIDASE)
2065           Length = 348
2066
2067  Score =  184 bits (462), Expect = 3e-46
2068  Identities = 116/315 (36%), Positives = 162/315 (50%), Gaps = 37/315 (11%)
2069
2070 Query:  35  KFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL 93
2071             K NK Y + +E L RFEIFK NL  I+E N +   +      G+N+F+DLS+DEFK  Y+
2072 Sbjct:  54  KHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYW----LGLNEFSDLSNDEFKEKYV 109
2073
2074 Query:  94  NNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTG 153
2075              +    +T+        D+EF+N    +   + DWR +GAVTPVK+QG C SCW+FST
2076 Sbjct:  110 GSLPEDYTNQP-----YDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVA 164
2077
2078 Query:  154 NVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ 213
2079              VEG + I    LV LSEQ LVDCD +            GCN G Q  +  Y+ +N GI
2080 Sbjct:  165 TVEGINKIKTGNLVELSEQELVDCDKQ----------SYGCNRGYQSTSLQYVAQN-GIH 213
2081
2082 Query:  214 TESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAV 273
2083 pattern 237                        ****
2084               + YPY A+  T C  N    GP  + K +    +  N        ++  P+++  ++
2085 Sbjct:  214 LRAKYPYIAKQQT-CRANQVG-GP--KVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESA 269
2086
2087 Query:  274 --EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYI 331
2088               ++Q Y GG+F+  C    +DH +  VGY            Y ++KNSWG  WGE GYI
2089 Sbjct:  270 GRDFQNYKGGIFEGSCG-TKVDHAVTAVGYGKSG-----GKGYILIKNSWGPGWGENGYI 323
2090
2091 Query:  332 YLRRGK----NTCGV 342
2092              +RR        CGV
2093 Sbjct:  324 RIRRASGNSPGVCGV 338
2094
2095
2096 >sp|P25250|CYS2_HORVU CYSTEINE PROTEINASE EP-B 2 PRECURSOR
2097           Length = 373
2098
2099  Score =  183 bits (461), Expect = 3e-46
2100  Identities = 125/349 (35%), Positives = 171/349 (48%), Gaps = 40/349 (11%)
2101
2102 Query:  8   VLAVFTVFVSSRGIPPEEQSQFLE---------FQDKFNKKYSHEEYLERFEIFKSNLGK 58
2103             VLAV  V + S  IP E++    E         +Q     +  H E   RF  FKSN
2104 Sbjct:  17  VLAVAAVELCS-AIPMEDKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHF 75
2105
2106 Query:  59  IEELNLIAINHKADTKFGV--NKFADLSSDEFKNYYLNNKEAIFTDDLP-VADYLDDEF- 114
2107             I      + N + D  + +  N+F D+   EF+  ++ +         P V  ++
2108 Sbjct:  76  IH-----SHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALN 130
2109
2110 Query:  115 INSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNL 174
2111             ++ +PP    + DWR +GAVT VK+QG+CGSCW+FST  +VEG + I    LVSLSEQ L
2112 Sbjct:  131 VSDLPP----SVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQEL 186
2113
2114 Query:  175 VDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSAN 234
2115             +DCD          A ++GC GGL  NA+ YI  NGG+ TE++YPY A  GT CN   A
2116 Sbjct:  187 IDCD---------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT-CNVARAA 236
2117
2118 Query:  235 IGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIPCNPNSL 292
2119 pattern 237   ****
2120                     I     +P N        V+  P+++A +A    + FY  GVF   C    L
2121 Sbjct:  237 QNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECG-TEL 295
2122
2123 Query:  293 DHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCG 341
2124             DHG+ +VGY     +      YW VKNSWG  WGEQGYI + +     G
2125 Sbjct:  296 DHGVAVVGYG----VAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 340
2126
2127
2128 >sp|P25249|CYS1_HORVU CYSTEINE PROTEINASE EP-B 1 PRECURSOR
2129           Length = 371
2130
2131  Score =  183 bits (460), Expect = 5e-46
2132  Identities = 126/353 (35%), Positives = 170/353 (47%), Gaps = 48/353 (13%)
2133
2134 Query:  8   VLAVFTVFVSSRGIPPEEQSQFLE---------FQDKFNKKYSHEEYLERFEIFKSNLGK 58
2135             VLAV  V + S  IP E++    E         +Q     +  H E   RF  FKSN
2136 Sbjct:  17  VLAVAAVELCS-AIPMEDKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHF 75
2137
2138 Query:  59  IEELNLIAINHKADTKFGV--NKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEF-- 114
2139             I      + N + D  + +  N+F D+   EF+  ++ +       D P        F
2140 Sbjct:  76  IH-----SHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRR----DTPAKPPSVPGFMY 126
2141
2142 Query:  115 ----INSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLS 170
2143                 ++ +PP    + DWR +GAVT VK+QG+CGSCW+FST  +VEG + I    LVSLS
2144 Sbjct:  127 AALNVSDLPP----SVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLS 182
2145
2146 Query:  171 EQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNF 230
2147             EQ L+DCD          A ++GC GGL  NA+ YI  NGG+ TE++YPY A  GT CN
2148 Sbjct:  183 EQELIDCD---------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT-CNV 232
2149
2150 Query:  231 NSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIPCN 288
2151 pattern 237       ****
2152               A         I     +P N        V+  P+++A +A    + FY  GVF   C
2153 Sbjct:  233 ARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGDCG 292
2154
2155 Query:  289 PNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCG 341
2156                LDHG+ +VGY     +      YW VKNSWG  WGEQGYI + +     G
2157 Sbjct:  293 -TELDHGVAVVGYG----VAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 340
2158
2159
2160 >sp|P43236|CATK_RABIT CATHEPSIN K PRECURSOR (OC-2 PROTEIN)
2161           Length = 329
2162
2163  Score =  183 bits (459), Expect = 6e-46
2164  Identities = 119/348 (34%), Positives = 181/348 (51%), Gaps = 35/348 (10%)
2165
2166 Query:  9   LAVFTVFVSSRGIPPEE--QSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLI 65
2167             L V  + V S  + PEE   +Q+  ++  ++K+Y+ + + + R  I++ NL  I   NL
2168 Sbjct:  4   LKVLLLPVVSFALHPEEILDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLE 63
2169
2170 Query:  66  AINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDE-FINSIPPEEQT 124
2171             A       +  +N   D++S+E        K        P   + +D  +I
2172 Sbjct:  64  ASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP------PSRSHSNDTLYIPDWEGRTPD 117
2173
2174 Query:  125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEY 184
2175             + D+R +G VTPVKNQGQCGSCW+FS+ G +EGQ      KL++LS QNLVDC  E
2176 Sbjct:  118 SIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---- 173
2177
2178 Query:  185 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKIS 244
2179 pattern 237                                                     ****
2180                   + GC GG   NA+ Y+ +N GI +E +YPY  +    C +N       + AK
2181 Sbjct:  174 ------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQ-DESCMYNPTG----KAAKCR 222
2182
2183 Query:  245 NFTMIPK-NETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILIVG 300
2184              +  IP+ NE  +   +   GP+++A DA    +QFY  GV +D  C+ ++++H +L VG
2185 Sbjct:  223 GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVG 282
2186
2187 Query:  301 YSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
2188             Y       +K   +WI+KNSWG  WG +GYI + R K N CG++N  S
2189 Sbjct:  283 YG-----IQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 325
2190
2191
2192 >sp|P22895|P34_SOYBN P34 PROBABLE THIOL PROTEASE PRECURSOR
2193           Length = 379
2194
2195  Score =  182 bits (458), Expect = 8e-46
2196  Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 38/322 (11%)
2197
2198 Query:  40  YSHEEYLERFEIFKSNLGKIEELNLIAINHKA--DTKFGVNKFADLSSDEFKNYYLNNKE 97
2199             ++HEE  +R EIFK+N   I ++N    N K+    + G+NKFAD++  EF   YL   +
2200 Sbjct:  56  HNHEEEAKRLEIFKNNSNYIRDMNA---NRKSPHSHRLGLNKFADITPQEFSKKYLQAPK 112
2201
2202 Query:  98  AIFTDDLPVAD--YLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNV 155
2203              + +  + +A+     +++    PP    ++DWR +G +T VK QG CG  W+FS TG +
2204 Sbjct:  113 DV-SQQIKMANKKMKKEQYSCDHPP---ASWDWRKKGVITQVKYQGGCGRGWAFSATGAI 168
2205
2206 Query:  156 EGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTE 215
2207             E  H I+   LVSLSEQ LVDC  E           EG   G Q  ++ +++++GGI T+
2208 Sbjct:  169 EAAHAIATGDLVSLSEQELVDCVEE----------SEGSYNGWQYQSFEWVLEHGGIATD 218
2209
2210 Query:  216 SSYPYTAETGTQCNFN----SANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAAD 271
2211 pattern 237                          ****
2212               YPY A+ G +C  N       I   E   +S+ +   + E      I+   P++++ D
2213 Sbjct:  219 DDYPYRAKEG-RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQ-PISVSID 276
2214
2215 Query:  272 AVEWQFYIGGVFDIP--CNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQG 329
2216             A ++  Y GG++D     +P  ++H +L+VGY + +      + YWI KNSWG DWGE G
2217 Sbjct:  277 AKDFHLYTGGIYDGENCTSPYGINHFVLLVGYGSAD-----GVDYWIAKNSWGFDWGEDG 331
2218
2219 Query:  330 YIYLRRGK----NTCGVSNFVS 347
2220             YI+++R        CG++ F S
2221 Sbjct:  332 YIWIQRNTGNLLGVCGMNYFAS 353
2222
2223
2224 >sp|P49935|CATH_MOUSE CATHEPSIN H PRECURSOR (CATHEPSIN B3) (CATHEPSIN BA)
2225           Length = 333
2226
2227  Score =  180 bits (451), Expect = 5e-45
2228  Identities = 115/332 (34%), Positives = 166/332 (49%), Gaps = 36/332 (10%)
2229
2230 Query:  25  EQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84
2231             E+  F  +  +  K YS  EY  R ++F +N  KI+  N    NH    K  +N+F+D+S
2232 Sbjct:  29  EKFHFKSWMKQHQKTYSSVEYNHRLQMFANNWRKIQAHN--QRNHTF--KMALNQFSDMS 84
2233
2234 Query:  85  SDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRG-AVTPVKNQGQC 143
2235               E K+ +L ++                 ++    P   ++ DWR +G  V+PVKNQG C
2236 Sbjct:  85  FAEIKHKFLWSEPQN-------CSATKSNYLRGTGPYP-SSMDWRKKGNVVSPVKNQGAC 136
2237
2238 Query:  144 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 203
2239              SCW+FSTTG +E    I+  K++SL+EQ LVDC         +   + GC GGL   A+
2240 Sbjct:  137 ASCWTFSTTGALESAVAIASGKMLSLAEQQLVDC--------AQAFNNHGCKGGLPSQAF 188
2241
2242 Query:  204 NYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKN-ETVMAGYIVS 262
2243 pattern 237                                  ****
2244              YI+ N GI  E SYPY  +  + C FN      +  A + N   I  N E  M   +
2245 Sbjct:  189 EYILYNKGIMEEDSYPYIGK-DSSCRFNP----QKAVAFVKNVVNITLNDEAAMVEAVAL 243
2246
2247 Query:  263 TGPLAIAADAVE-WQFYIGGVFDIPC---NPNSLDHGILIVGYSAKNTIFRKNMPYWIVK 318
2248               P++ A +  E +  Y  GV+        P+ ++H +L VGY  +N +      YWIVK
2249 Sbjct:  244 YNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLL-----YWIVK 298
2250
2251 Query:  319 NSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
2252             NSWG+ WGE GY  + RGKN CG++   S  I
2253 Sbjct:  299 NSWGSQWGENGYFLIERGKNMCGLAACASYPI 330
2254
2255
2256 >sp|P55097|CATK_MOUSE CATHEPSIN K PRECURSOR
2257           Length = 329
2258
2259  Score =  178 bits (447), Expect = 2e-44
2260  Identities = 117/352 (33%), Positives = 182/352 (51%), Gaps = 43/352 (12%)
2261
2262 Query:  9   LAVFTVFVSSRGIPPEEQ--SQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLI 65
2263             L V  + + S  + PEE   +Q+  ++    K+Y+ + + + R  I++ NL +I   NL
2264 Sbjct:  4   LKVLLLPMVSFALSPEEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLE 63
2265
2266 Query:  66  AINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDD-----EFINSIPP 120
2267             A       +  +N   D++S+E        +        P   Y +D     E+   +P
2268 Sbjct:  64  ASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP------PSRSYSNDTLYTPEWEGRVPD 117
2269
2270 Query:  121 EEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 180
2271                 + D+R +G VTPVKNQGQCGSCW+FS+ G +EGQ      KL++LS QNLVDC  E
2272 Sbjct:  118 ----SIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE 173
2273
2274 Query:  181 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ 240
2275 pattern 237                                                         ****
2276                       + GC GG    A+ Y+ +NGGI +E ++PY  +    C +N+      +
2277 Sbjct:  174 ----------NYGCGGGYMTTAFQYVQQNGGIDSEDAFPYVGQ-DESCMYNAT----AKA 218
2278
2279 Query:  241 AKISNFTMIP-KNETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGI 296
2280             AK   +  IP  NE  +   +   GP++++ DA    +QFY  GV +D  C+ ++++H +
2281 Sbjct:  219 AKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAV 278
2282
2283 Query:  297 LIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
2284             L+VGY       +K   +WI+KNSWG  WG +GY  L R K N CG++N  S
2285 Sbjct:  279 LVVGYGT-----QKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325
2286
2287
2288 >sp|P56202|CATW_HUMAN CATHEPSIN W PRECURSOR (LYMPHOPAIN)
2289           Length = 376
2290
2291  Score =  177 bits (445), Expect = 3e-44
2292  Identities = 112/351 (31%), Positives = 171/351 (47%), Gaps = 47/351 (13%)
2293
2294 Query:  22  PPEEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKF 80
2295             P E +  F  FQ +FN+ Y S EE+  R +IF  NL + + L    +      +FGV  F
2296 Sbjct:  35  PLELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLG---TAEFGVTPF 91
2297
2298 Query:  81  ADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAF--DWR-TRGAVTPV 137
2299             +DL+ +EF   Y   + A     +          I S  PEE   F  DWR   GA++P+
2300 Sbjct:  92  SDLTEEEFGQLYGYRRAAGGVPSM-------GREIRSEEPEESVPFSCDWRKVAGAISPI 144
2301
2302 Query:  138 KNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGG 197
2303             K+Q  C  CW+ +  GN+E    IS    V +S   L+DC            C +GC+GG
2304 Sbjct:  145 KDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVHELLDCGR----------CGDGCHGG 194
2305
2306 Query:  198 LQPNAYNYIIKNGGIQTESSYPYTAETGT-QCNFNSANIGPEEQAKISNFTMIPKNETVM 256
2307 pattern 237                                         ****
2308                +A+  ++ N G+ +E  YP+  +    +C+        ++ A I +F M+  NE  +
2309 Sbjct:  195 FVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKY----QKVAWIQDFIMLQNNEHRI 250
2310
2311 Query:  257 AGYIVSTGPLAIAADAVEWQFYIGGVFDIP---CNPNSLDHGILIVGYSA--------KN 305
2312             A Y+ + GP+ +  +    Q Y  GV       C+P  +DH +L+VG+ +
2313 Sbjct:  251 AQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAE 310
2314
2315 Query:  306 TIFRKNMP-------YWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTS 349
2316             T+  ++ P       YWI+KNSWGA WGE+GY  L RG NTCG++ F  T+
2317 Sbjct:  311 TVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTA 361
2318
2319
2320 >sp|P56203|CATW_MOUSE CATHEPSIN W PRECURSOR (LYMPHOPAIN)
2321           Length = 371
2322
2323  Score =  176 bits (442), Expect = 6e-44
2324  Identities = 110/346 (31%), Positives = 166/346 (47%), Gaps = 40/346 (11%)
2325
2326 Query:  22  PPEEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKF 80
2327             P E +  F  FQ +FN+ Y +  EY  R  IF  NL + + L    +      +FG   F
2328 Sbjct:  33  PLELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLG---TAEFGETPF 89
2329
2330 Query:  81  ADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWR-TRGAVTPVKN 139
2331             +DL+ +EF   Y   +    T ++       + +  S+P       DWR  +  ++ VKN
2332 Sbjct:  90  SDLTEEEFGQLYGQERSPERTPNM-TKKVESNTWGESVP----RTCDWRKAKNIISSVKN 144
2333
2334 Query:  140 QGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQ 199
2335             QG C  CW+ +   N++    I   + V +S Q L+DC          E C  GCNGG
2336 Sbjct:  145 QGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDC----------ERCGNGCNGGFV 194
2337
2338 Query:  200 PNAYNYIIKNGGIQTESSYPYTAETGT-QCNFNSANIGPEEQAKISNFTMIPKNETVMAG 258
2339 pattern 237                                       ****
2340              +AY  ++ N G+ +E  YP+  +    +C         ++ A I +FTM+  NE  +A
2341 Sbjct:  195 WDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKY----KKVAWIQDFTMLSNNEQAIAH 250
2342
2343 Query:  259 YIVSTGPLAIAADAVEWQFYIGGVFDIP---CNPNSLDHGILIVGYSAKN------TIF- 308
2344             Y+   GP+ +  +    Q Y  GV       C+P  +DH +L+VG+  K       T+
2345 Sbjct:  251 YLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLS 310
2346
2347 Query:  309 -----RKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTS 349
2348                  R + PYWI+KNSWGA WGE+GY  L RG NTCGV+ +  T+
2349 Sbjct:  311 HSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTA 356
2350
2351
2352 >sp|P43234|CATO_HUMAN CATHEPSIN O PRECURSOR
2353           Length = 321
2354
2355  Score =  173 bits (435), Expect = 4e-43
2356  Identities = 100/304 (32%), Positives = 152/304 (49%), Gaps = 30/304 (9%)
2357
2358 Query:  52  FKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLD 111
2359             F+ +L +   LN +  +  +   +G+N+F+ L  +EFK  YL +K + F
2360 Sbjct:  44  FRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPR-------YS 96
2361
2362 Query:  112 DEFINSIPPEE-QTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLS 170
2363              E   SIP       FDWR +  VT V+NQ  CG CW+FS  G VE  + I    L  LS
2364 Sbjct:  97  AEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLS 156
2365
2366 Query:  171 EQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIK-NGGIQTESSYPYTAETGTQCN 229
2367              Q ++DC +           + GCNGG   NA N++ K    +  +S YP+ A+ G  C+
2368 Sbjct:  157 VQQVIDCSYN----------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGL-CH 205
2369
2370 Query:  230 FNSANIGPEEQAKISNFTM--IPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPC 287
2371 pattern 237        ****
2372             + S   G      I  ++       E  MA  +++ GPL +  DAV WQ Y+GG+    C
2373 Sbjct:  206 YFS---GSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHC 262
2374
2375 Query:  288 NPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVS 347
2376             +    +H +LI G+         + PYWIV+NSWG+ WG  GY +++ G N CG+++ VS
2377 Sbjct:  263 SSGEANHAVLITGFDKTG-----STPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSVS 317
2378
2379 Query:  348 TSII 351
2380             +  +
2381 Sbjct:  318 SIFV 321
2382
2383
2384 >sp|P00784|PAPA_CARPA PAPAIN PRECURSOR (PAPAYA PROTEINASE I) (PPI)
2385           Length = 345
2386
2387  Score =  173 bits (433), Expect = 7e-43
2388  Identities = 119/322 (36%), Positives = 163/322 (49%), Gaps = 43/322 (13%)
2389
2390 Query:  35  KFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKF--GVNKFADLSSDEFKNY 91
2391             K NK Y + +E + RFEIFK NL  I+E N      K +  +  G+N FAD+S+DEFK
2392 Sbjct:  54  KHNKIYKNIDEKIYRFEIFKDNLKYIDETN------KKNNSYWLGLNVFADMSNDEFKEK 107
2393
2394 Query:  92  YLNNKEAIFTD-DLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFS 150
2395             Y  +    +T  +L   + L+D  +N   PE     DWR +GAVTPVKNQG CGSCW+FS
2396 Sbjct:  108 YTGSIAGNYTTTELSYEEVLNDGDVNI--PEY---VDWRQKGAVTPVKNQGSCGSCWAFS 162
2397
2398 Query:  151 TTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNG 210
2399                 +EG   I    L   SEQ L+DCD              GCNGG   +A   ++
2400 Sbjct:  163 AVVTIEGIIKIRTGNLNEYSEQELLDCDRR----------SYGCNGGYPWSALQ-LVAQY 211
2401
2402 Query:  211 GIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAA 270
2403 pattern 237                           ****
2404             GI   ++YPY    G Q    S   GP          + P NE  +  Y ++  P+++
2405 Sbjct:  212 GIHYRNTYPY---EGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALL-YSIANQPVSVVL 267
2406
2407 Query:  271 DAV--EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQ 328
2408             +A   ++Q Y GG+F  PC  N +DH +  VGY            Y ++KNSWG  WGE
2409 Sbjct:  268 EAAGKDFQLYRGGIFVGPCG-NKVDHAVAAVGYGPN---------YILIKNSWGTGWGEN 317
2410
2411 Query:  329 GYIYLRRGK-NTCGVSNFVSTS 349
2412             GYI ++RG  N+ GV    ++S
2413 Sbjct:  318 GYIRIKRGTGNSYGVCGLYTSS 339
2414
2415
2416 >sp|P25774|CATS_HUMAN CATHEPSIN S PRECURSOR
2417           Length = 331
2418
2419  Score =  171 bits (428), Expect = 3e-42
2420  Identities = 116/351 (33%), Positives = 175/351 (49%), Gaps = 35/351 (9%)
2421
2422 Query:  5   LLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYS--HEEYLERFEIFKSNLGKIEEL 62
2423             L+ VL V +  V+     P     +  ++  + K+Y   +EE + R  I++ NL  +
2424 Sbjct:  4   LVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRL-IWEKNLKFVMLH 62
2425
2426 Query:  63  NLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEE 122
2427             NL           G+N   D++S+E  +          T  L V             P
2428 Sbjct:  63  NLEHSMGMHSYDLGMNHLGDMTSEEVMS---------LTSSLRVPSQWQRNITYKSNPNR 113
2429
2430 Query:  123 --QTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHE 180
2431                 + DWR +G VT VK QG CG+CW+FS  G +E Q  +   KLV+LS QNLVDC
2432 Sbjct:  114 ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVTLSAQNLVDC--- 170
2433
2434 Query:  181 CMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQ 240
2435 pattern 237                                                         ****
2436                   E+  ++GCNGG    A+ YII N GI +++SYPY A    +C ++S
2437 Sbjct:  171 ----STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKA-MDQKCQYDS----KYRA 221
2438
2439 Query:  241 AKISNFTMIP-KNETVMAGYIVSTGPLAIAADAVEWQFYI--GGVFDIPCNPNSLDHGIL 297
2440             A  S +T +P   E V+   + + GP+++  DA    F++   GV+  P    +++HG+L
2441 Sbjct:  222 ATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVL 281
2442
2443 Query:  298 IVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
2444             +VGY   N        YW+VKNSWG ++GE+GYI + R K N CG+++F S
2445 Sbjct:  282 VVGYGDLN-----GKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 327
2446
2447
2448 >sp||CATL_CHICK_1 [Segment 1 of 2] CATHEPSIN L
2449           Length = 176
2450
2451  Score =  167 bits (420), Expect = 2e-41
2452  Identities = 87/179 (48%), Positives = 115/179 (63%), Gaps = 16/179 (8%)
2453
2454 Query:  127 DWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEG 186
2455             DWR +G VTPVK+QGQCGSCW+FSTTG +EGQHF ++ KLVSLSEQNLVDC       EG
2456 Sbjct:  6   DWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRP----EG 61
2457
2458 Query:  187 EEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNF 246
2459 pattern 237                                                   ****
2460                 ++GCNGGL   A+ Y+  NGGI +E SYPYTA+    C + +        A  + F
2461 Sbjct:  62  ----NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKA----EYNAANDTGF 113
2462
2463 Query:  247 TMIPK-NETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIP-CNPNSLDHGILIVGY 301
2464               IP+ +E  +   + S GP+++A DA    +QFY  G++  P C+   LDHG+L+VGY
2465 Sbjct:  114 VDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGY 172
2466
2467
2468 >sp|P25326|CATS_BOVIN CATHEPSIN S
2469           Length = 217
2470
2471  Score =  165 bits (413), Expect = 1e-40
2472  Identities = 90/227 (39%), Positives = 129/227 (56%), Gaps = 21/227 (9%)
2473
2474 Query:  125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEY 184
2475             + DWR +G VT VK QG CGSCW+FS  G +E Q  +   KLVSLS QNLVDC
2476 Sbjct:  4   SMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC------- 56
2477
2478 Query:  185 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKIS 244
2479 pattern 237                                                     ****
2480                +  ++GCNGG    A+ YII N GI +E+SYPY A  G +C ++  N      A  S
2481 Sbjct:  57  STAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG-KCQYDVKN----RAATCS 111
2482
2483 Query:  245 NFTMIP-KNETVMAGYIVSTGPLAIAADAVEWQFYI--GGVFDIPCNPNSLDHGILIVGY 301
2484              +  +P  +E  +   + + GP+++  DA    F++   GV+  P    +++HG+L+VGY
2485 Sbjct:  112 RYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGY 171
2486
2487 Query:  302 SAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 347
2488                +        YW+VKNSWG  +G+QGYI + R   N CG++N+ S
2489 Sbjct:  172 GNLD-----GKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPS 213
2490
2491
2492 >sp|P80884|ANAN_ANACO ANANAIN
2493           Length = 216
2494
2495  Score =  161 bits (403), Expect = 2e-39
2496  Identities = 93/224 (41%), Positives = 123/224 (54%), Gaps = 26/224 (11%)
2497
2498 Query:  125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEY 184
2499             + DWR  GAVT VKNQG+CGSCW+F++   VE  + I +  LVSLSEQ ++DC
2500 Sbjct:  4   SIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC------- 56
2501
2502 Query:  185 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKIS 244
2503 pattern 237                                                     ****
2504                 A   GC GG    AY++II N G+ + + YPY A  GT C  N    G    A I+
2505 Sbjct:  57  ----AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGT-CKTN----GVPNSAYIT 107
2506
2507 Query:  245 NFTMIPKNETVMAGYIVSTGPLAIAADAV-EWQFYIGGVFDIPCNPNSLDHGILIVGYSA 303
2508              +T + +N      Y VS  P+A A DA   +Q Y  GVF  PC    L+H I+I+GY
2509 Sbjct:  108 RYTYVQRNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTGPCG-TRLNHAIVIIGYGQ 166
2510
2511 Query:  304 KNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT----CGVS 343
2512              +        +WIV+NSWGA WGE GYI L R  ++    CG++
2513 Sbjct:  167 DSA----GKKFWIVRNSWGAGWGEGGYIRLARDVSSSFGICGIA 206
2514
2515
2516 >sp|Q02765|CATS_RAT CATHEPSIN S PRECURSOR
2517           Length = 330
2518
2519  Score =  158 bits (396), Expect = 1e-38
2520  Identities = 89/226 (39%), Positives = 128/226 (56%), Gaps = 22/226 (9%)
2521
2522 Query:  127 DWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEG 186
2523             DWR +G VT VK QG CGSCW+FS  G +EGQ  +   KLVSLS QNLVDC  E
2524 Sbjct:  118 DWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE------ 171
2525
2526 Query:  187 EEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNF 246
2527 pattern 237                                                   ****
2528             E+  ++GC GG    A+ YII +  I +E+SYPY A    +C ++  N      A  S +
2529 Sbjct:  172 EKYGNKGCGGGFMTEAFQYII-DTSIDSEASYPYKA-MDEKCLYDPKN----RAATCSRY 225
2530
2531 Query:  247 TMIP-KNETVMAGYIVSTGPLAIAADAV---EWQFYIGGVFDIPCNPNSLDHGILIVGYS 302
2532               +P  +E  +   + + GP+++  D      +  Y  GV+D P    +++HG+L+VGY
2533 Sbjct:  226 IELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYG 285
2534
2535 Query:  303 AKNTIFRKNMPYWIVKNSWGADWGEQGYIYL-RRGKNTCGVSNFVS 347
2536               +        YW+VKNSWG  +G+QGYI + R  KN CG++++ S
2537 Sbjct:  286 TLD-----GKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326
2538
2539
2540 >sp|P20721|CYSL_LYCES LOW-TEMPERATURE-INDUCED CYSTEINE PROTEINASE PRECURSOR
2541           Length = 346
2542
2543  Score =  158 bits (395), Expect = 2e-38
2544  Identities = 87/238 (36%), Positives = 130/238 (54%), Gaps = 25/238 (10%)
2545
2546 Query:  112 DEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSE 171
2547             D ++  +      + DWR +G +  VK+QG CGSCW+FS    +E  + I    L+SLSE
2548 Sbjct:  8   DRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSE 67
2549
2550 Query:  172 QNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFN 231
2551             Q LVDCD          + +EGC+GGL   A+ ++IKNGGI TE  YPY    G  C+
2552 Sbjct:  68  QELVDCD---------RSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGV-CDQY 117
2553
2554 Query:  232 SANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIPCNP 289
2555 pattern 237      ****
2556               N    +  KI ++  +P N        V+  P++IA +A   ++Q Y  G+F   C
2557 Sbjct:  118 RKN---AKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCG- 173
2558
2559 Query:  290 NSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNT----CGVS 343
2560              ++DHG++I GY  +N      M YWIV+NSWGA+  E GY+ ++R  ++    CG++
2561 Sbjct:  174 TAVDHGVVIAGYGTEN-----GMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLA 226
2562
2563
2564 >sp|P36184|ACP1_ENTHI CYSTEINE PROTEINASE ACP1 PRECURSOR
2565           Length = 308
2566
2567  Score =  152 bits (379), Expect = 1e-36
2568  Identities = 105/320 (32%), Positives = 151/320 (46%), Gaps = 48/320 (15%)
2569
2570 Query:  29  FLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
2571             F ++    NK +++  EYL RF +F  N   +E          A+    +N FAD++ +E
2572 Sbjct:  18  FKQWAATHNKVFANRAEYLYRFAVFLDNKKFVE----------ANANTELNVFADMTHEE 67
2573
2574 Query:  88  FKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCW 147
2575             F   +L       T ++P         + + P     + DWR+   + P K+QGQCGSCW
2576 Sbjct:  68  FIQTHLG-----MTYEVPETTSNVKAAVKAAPE----SVDWRS--IMNPAKDQGQCGSCW 116
2577
2578 Query:  148 SFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYII 207
2579             +F TT  +EG+      KL S SEQ LVDCD          A D GC GG   N+  +I
2580 Sbjct:  117 TFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD----------ASDNGCEGGHPSNSLKFIQ 166
2581
2582 Query:  208 KNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLA 267
2583 pattern 237                              ****
2584             +N G+  ES YPY A  GT C     N+     ++     +   +ET +   I   GP+A
2585 Sbjct:  167 ENNGLGLESDYPYKAVAGT-CK-KVKNVATVTGSR----RVTDGSETGLQTIIAENGPVA 220
2586
2587 Query:  268 IAADA--VEWQFYIGGVF--DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGA 323
2588             +  DA    +Q Y  G    D  C    ++H +  VGY + +     N  YWI++NSWG
2589 Sbjct:  221 VGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNS-----NGKYWIIRNSWGT 275
2590
2591 Query:  324 DWGEQGYIYLRR-GKNTCGV 342
2592              WG+ GY  L R   N CG+
2593 Sbjct:  276 SWGDAGYFLLARDSNNMCGI 295
2594
2595
2596 >sp|Q01957|CPP1_ENTHI CYSTEINE PROTEINASE 1 PRECURSOR
2597           Length = 315
2598
2599  Score =  150 bits (375), Expect = 4e-36
2600  Identities = 103/317 (32%), Positives = 163/317 (50%), Gaps = 47/317 (14%)
2601
2602 Query:  37  NKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADT-KFGVN-KFADLSSDEFKNYYLN 94
2603             NK ++  E L R  IF  N        ++A N++ +T K  V+  FA ++++E+ +
2604 Sbjct:  24  NKHFTAVESLRRRAIFNMNA------RIVAENNRKETFKLSVDGPFAAMTNEEYNSLLKL 77
2605
2606 Query:  95  NKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGN 154
2607              +      ++         ++N   P+   A DWR +G VTP+++QG CGSC++F +
2608 Sbjct:  78  KRSGEEKGEV--------RYLNIQAPK---AVDWRKKGKVTPIRDQGNCGSCYTFGSIAA 126
2609
2610 Query:  155 VEGQHFISQ---NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGG 211
2611             +EG+  I +   ++ + LSE+++V C  E    +G    + GCNGGL  N YNYI++N G
2612 Sbjct:  127 LEGRLLIEKGGDSETLDLSEEHMVQCTRE----DG----NNGCNGGLGSNVYNYIMEN-G 177
2613
2614 Query:  212 IQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAAD 271
2615 pattern 237                          ****
2616             I  ES YPYT    T           +  AKI ++  + +N  V     +S G + ++ D
2617 Sbjct:  178 IAKESDYPYTGSDST------CRSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSID 231
2618
2619 Query:  272 A--VEWQFYIGGVF-DIPCNPN--SLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWG 326
2620             A  V++Q Y  G + D  C  N  +L+H +  VGY   +         WIV+NSWG  WG
2621 Sbjct:  232 ASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVD-----GKECWIVRNSWGTGWG 286
2622
2623 Query:  327 EQGYIYLRRGKNTCGVS 343
2624             E+GYI +    NTCGV+
2625 Sbjct:  287 EKGYINMVIEGNTCGVA 303
2626
2627
2628 >sp|O17473|CATL_BRUPA CATHEPSIN L-LIKE PRECURSOR
2629           Length = 395
2630
2631  Score =  150 bits (374), Expect = 6e-36
2632  Identities = 101/331 (30%), Positives = 157/331 (46%), Gaps = 29/331 (8%)
2633
2634 Query:  26  QSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSS 85
2635             ++++ ++     K Y  +E   R  IF+SN    E +N             +N  ADL+
2636 Sbjct:  88  ETEWKDYVTALGKHYDQKENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTD 147
2637
2638 Query:  86  DEF--KNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQC 143
2639             +EF  +N      +         +++   +    +P +     DWRT+GAVTPV+NQG+C
2640 Sbjct:  148 EEFMVRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQ----VDWRTKGAVTPVRNQGEC 203
2641
2642 Query:  144 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 203
2643             GSC++F+T   +E  H     +L+ LS QN+VDC             + GC+GG  P A+
2644 Sbjct:  204 GSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCT--------RNLGNNGCSGGYMPTAF 255
2645
2646 Query:  204 NYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMI-PKNETVMAGYIVS 262
2647 pattern 237                                  ****
2648              Y  +  GI  ES YPY   T  +C +  +     +    + F  I P +E  +   +
2649 Sbjct:  256 QYASRY-GIAMESRYPYVG-TEQRCRWQQSIAVVTD----NGFNEIQPGDELALKHAVAK 309
2650
2651 Query:  263 TGP--LAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNS 320
2652              GP  + I+     ++FY  GV+    N    DH +L VGY    +       YWIVKNS
2653 Sbjct:  310 RGPVVVGISGSKRSFRFYKDGVYS-EGNCGRPDHAVLAVGYGTHPSY----GDYWIVKNS 364
2654
2655 Query:  321 WGADWGEQGYIYLRRGK-NTCGVSNFVSTSI 350
2656             WG DWG+ GY+Y+ R + N C +++  S  I
2657 Sbjct:  365 WGTDWGKDGYVYMARNRGNMCHIASAASFPI 395
2658
2659
2660 >sp|P46102|CYSP_PLAVN CYSTEINE PROTEINASE PRECURSOR
2661           Length = 506
2662
2663  Score =  150 bits (374), Expect = 6e-36
2664  Identities = 116/363 (31%), Positives = 180/363 (48%), Gaps = 64/363 (17%)
2665
2666 Query:  27  SQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSS 85
2667             S+F ++  + NKKY + +E L+RFE FK    K ++ N +   +       VN+++D S
2668 Sbjct:  160 SKFFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSK 219
2669
2670 Query:  86  DEFKNYYLNNKEAIFTDDL------PVADYLDDEFINSIPPEEQT---AFDWRTRGAVTP 136
2671             +EF NY+   K      DL      P+  +L +  + S+  + +    + D+R++    P
2672 Sbjct:  220 EEFDNYF--KKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLP 277
2673
2674 Query:  137 VKNQGQCGSCWSFSTTGNVEGQHFISQNKL-VSLSEQNLVDCDHECMEYEGEEACDEGCN 195
2675              K+QG CGSCW+F+  GN E  +  +++++ +S SEQ +VDC  E          + GC+
2676 Sbjct:  278 PKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE----------NYGCD 327
2677
2678 Query:  196 GGLQPNAYNYIIKNGGIQTESSYPYTAETGTQC-NFNSANIGPEEQAKISNFTMIPKNET 254
2679 pattern 237                                           ****
2680             GG    A+ Y+I NG +     YPY       C N+  + +G     ++     +  NE
2681 Sbjct:  328 GGNPFYAFLYMINNG-VCLGDEYPYKGHEDFFCLNYRCSLLG-----RVHFIGDVKPNEL 381
2682
2683 Query:  255 VMAGYIVSTGPLAIAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSA---------- 303
2684             +MA   V  GP+ IA  A E +  Y GGVFD  CNP  L+H +L+VGY
2685 Sbjct:  382 IMALNYV--GPVTIAVGASEDFVLYSGGVFDGECNPE-LNHSVLLVGYGQVKKSLAFEDS 438
2686
2687 Query:  304 -----KNTI--FRKNMP---------YWIVKNSWGADWGEQGYIYLRRGK----NTCGVS 343
2688                   N I  +++N+          YWIV+NSWG +WGE GYI ++R K      CGV
2689 Sbjct:  439 HSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVG 498
2690
2691 Query:  344 NFV 346
2692             + V
2693 Sbjct:  499 SDV 501
2694
2695
2696 >sp|Q06964|CPP3_ENTHI CYSTEINE PROTEINASE 3 PRECURSOR (CYSTEINE PROTEINASE ACP3)
2697           Length = 308
2698
2699  Score =  149 bits (372), Expect = 9e-36
2700  Identities = 103/316 (32%), Positives = 159/316 (49%), Gaps = 45/316 (14%)
2701
2702 Query:  37  NKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVN-KFADLSSDEFKNYYLNN 95
2703             NK ++  E L R  IF  N   + E N      K   K  V+  FA ++++E++   L +
2704 Sbjct:  17  NKHFTAVEALRRRAIFNMNARFVAEFN-----KKGSFKLSVDGPFAAMTNEEYRTL-LKS 70
2705
2706 Query:  96  KEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNV 155
2707             K  +  +           ++N   PE   + DWR +G VTP+++Q QCGSC++F +   +
2708 Sbjct:  71  KRTVEENGKVT-------YLNIQAPE---SVDWRAQGKVTPIRDQAQCGSCYTFGSLAAL 120
2709
2710 Query:  156 EGQHFISQN---KLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGI 212
2711             EG+  I +      + LSE++LV C          +  + GCNGGL  N Y+YII+N G+
2712 Sbjct:  121 EGRLLIEKGGNANTLDLSEEHLVQCT--------RDNGNNGCNGGLGSNVYDYIIQN-GV 171
2713
2714 Query:  213 QTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADA 272
2715 pattern 237                         ****
2716               ES YPYT  T + C  N      +  AKI+ +  +P+N        +S G + ++ DA
2717 Sbjct:  172 AKESDYPYTG-TDSTCKTN-----VKAFAKITGYNKVPRNNEAELKAALSQGLVDVSIDA 225
2718
2719 Query:  273 --VEWQFYIGGVF-DIPCNPN--SLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGE 327
2720                ++Q Y  G + D  C  N  +L+H +  VGY   +         WIV+NSWG  WG+
2721 Sbjct:  226 SSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVD-----GKECWIVRNSWGTGWGD 280
2722
2723 Query:  328 QGYIYLRRGKNTCGVS 343
2724             +GYI +    NTCGV+
2725 Sbjct:  281 KGYINMVIEGNTCGVA 296
2726
2727
2728 >sp|Q01958|CPP2_ENTHI CYSTEINE PROTEINASE 2 PRECURSOR
2729           Length = 315
2730
2731  Score =  149 bits (372), Expect = 9e-36
2732  Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 45/324 (13%)
2733
2734 Query:  29  FLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVN-KFADLSSDE 87
2735             F  +  K NK ++  E L R  IF  N   ++  N I        K  V+  FA ++++E
2736 Sbjct:  16  FNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIG-----SFKLSVDGPFAAMTNEE 70
2737
2738 Query:  88  FKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCW 147
2739             ++    + +    T++     YL+ +   S+        DWR  G VTP+++Q QCGSC+
2740 Sbjct:  71  YRTLLKSKRT---TEENGQVKYLNIQAPESV--------DWRKEGKVTPIRDQAQCGSCY 119
2741
2742 Query:  148 SFSTTGNVEGQHFISQN---KLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYN 204
2743             +F +   +EG+  I +      + LSE+++V C          +  + GCNGGL  N Y+
2744 Sbjct:  120 TFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCT--------RDNGNNGCNGGLGSNVYD 171
2745
2746 Query:  205 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTG 264
2747 pattern 237                                 ****
2748             YII++ G+  ES YPYT    T C  N  +      AKI+ +T +P+N        +S G
2749 Sbjct:  172 YIIEH-GVAKESDYPYTGSDST-CKTNVKSF-----AKITGYTKVPRNNEAELKAALSQG 224
2750
2751 Query:  265 PLAIAADA--VEWQFYIGGVF-DIPCNPN--SLDHGILIVGYSAKNTIFRKNMPYWIVKN 319
2752              + ++ DA   ++Q Y  G + D  C  N  +L+H +  VGY   +         WIV+N
2753 Sbjct:  225 LVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVD-----GKECWIVRN 279
2754
2755 Query:  320 SWGADWGEQGYIYLRRGKNTCGVS 343
2756             SWG  WG++GYI +    NTCGV+
2757 Sbjct:  280 SWGTGWGDKGYINMVIEGNTCGVA 303
2758
2759
2760 >sp|P36185|ACP2_ENTHI CYSTEINE PROTEINASE ACP2 PRECURSOR
2761           Length = 310
2762
2763  Score =  145 bits (363), Expect = 1e-34
2764  Identities = 102/330 (30%), Positives = 160/330 (47%), Gaps = 40/330 (12%)
2765
2766 Query:  20  GIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVN- 78
2767             GI       F  +  K NK ++  E L R  IF  N   ++  N I        K  V+
2768 Sbjct:  3   GIRIASAIDFNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIG-----SFKLSVDG 57
2769
2770 Query:  79  KFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVK 138
2771              FA ++++E++    + +    T++     YL+ +   S+        DWR  G VTP++
2772 Sbjct:  58  PFAAMTNEEYRTLLKSKRT---TEENGQVKYLNIQAPESV--------DWRKEGKVTPLR 106
2773
2774 Query:  139 NQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGL 198
2775             +Q QCGSC++F +   +EG+  I +       + N +D   E M+   +   + GCNGGL
2776 Sbjct:  107 DQAQCGSCYTFGSLAALEGRLLIEKG-----GDANTLDLSEEHMQCTRDNG-NNGCNGGL 160
2777
2778 Query:  199 QPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAG 258
2779 pattern 237                                       ****
2780               N Y+YII++G +  ES YPYT    T C  N  +       KI+ +T +P+N
2781 Sbjct:  161 GSNVYDYIIEHG-VAKESDYPYTGSDST-CKTNVKSF-----RKITGYTKVPRNNEAELK 213
2782
2783 Query:  259 YIVSTGPLAIAAD--AVEWQFYIGGVF-DIPCNPN--SLDHGILIVGYSAKNTIFRKNMP 313
2784               +S G L ++ D  + ++Q Y  G + D  C  N  +L+H +  VGY   +
2785 Sbjct:  214 AALSQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVD-----GKE 268
2786
2787 Query:  314 YWIVKNSWGADWGEQGYIYLRRGKNTCGVS 343
2788              WIV+NSWG  WG++GYI +    NTCGV+
2789 Sbjct:  269 CWIVRNSWGTSWGDKGYINMVIEGNTCGVA 298
2790
2791
2792 >sp|P25781|CYSP_THEAN CYSTEINE PROTEINASE PRECURSOR
2793           Length = 441
2794
2795  Score =  145 bits (362), Expect = 1e-34
2796  Identities = 107/345 (31%), Positives = 165/345 (47%), Gaps = 58/345 (16%)
2797
2798 Query:  28  QFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGV--NKFADLS 84
2799             +F  F +K+ K + S ++ ++RF  F+ N   ++        HK    + +  NKF+DLS
2800 Sbjct:  119 EFDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVK-------THKPTEPYSLDLNKFSDLS 171
2801
2802 Query:  85  SDEFKNYY--------------------LNNKEAIFTDDLPVADYLDDEFINSIPPEEQT 124
2803              +EFK  Y                    +++K  I+   L  A  +++    S+   E
2804 Sbjct:  172 DEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGEN- 230
2805
2806 Query:  125 AFDWRTRGAVTPVKNQGQ-CGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECME 183
2807               +W    AV+P K+QG  CGSCW+FS+  +VE  + + +NK   LSEQ LV+CD   M
2808 Sbjct:  231 -LNWARTDAVSPTKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKSSM- 288
2809
2810 Query:  184 YEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKI 243
2811 pattern 237                                                      ****
2812                      GC GGL   A  Y I + G+  ES  PYT    + C  +  N     +  I
2813 Sbjct:  289 ---------GCAGGLPITALEY-IHSKGVSFESEVPYTGIV-SPCKPSIKN-----KVFI 332
2814
2815 Query:  244 SNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSA 303
2816              + +++  N+ V    ++S   + IA    E + Y GG+F   C    L+H +L+VG
2817 Sbjct:  333 DSISILKGNDVVNKSLVISPTVVGIAV-TKELKLYSGGIFTGKCG-GELNHAVLLVGEGV 390
2818
2819 Query:  304 KNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR---GKNTCGVSNF 345
2820              +      M YWI+KNSWG DWGE G++ L+R   G + CG+  F
2821 Sbjct:  391 DH---ETGMRYWIIKNSWGEDWGENGFLRLQRTKKGLDKCGILTF 432
2822
2823
2824 >sp|P22497|CYSP_THEPA CYSTEINE PROTEINASE PRECURSOR
2825           Length = 439
2826
2827  Score =  143 bits (357), Expect = 5e-34
2828  Identities = 105/351 (29%), Positives = 163/351 (45%), Gaps = 72/351 (20%)
2829
2830 Query:  24  EEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKF--GVNKF 80
2831             E   +F EF  K+N++++  +E L R   F+SN  +++E        K D  +  G+N+F
2832 Sbjct:  119 EVYREFEEFNSKYNRRHATQQERLNRLVTFRSNYLEVKE-------QKGDEPYVKGINRF 171
2833
2834 Query:  81  ADLSSDEF--------------------------KNYYLNNKEAIFTDDLPVADYLDDEF 114
2835             +DL+  EF                          K Y  N K+A+ TD+        D
2836 Sbjct:  172 SDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDE--------DVD 223
2837
2838 Query:  115 INSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNL 174
2839             +  +  E     DWR   +VT VK+Q  CG CW+FST G+VEG +    +K   LS Q L
2840 Sbjct:  224 LAKLTGEN---LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQEL 280
2841
2842 Query:  175 VDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSAN 234
2843             +DCD          +   GC GGL  +AY Y+ K  G+ +    P+  +   +C+   A
2844 Sbjct:  281 LDCD----------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPF-VDKARRCSVPKA- 327
2845
2846 Query:  235 IGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDH 294
2847 pattern 237   ****
2848                 ++  + ++ +  K + VM   + S+      + + E   Y  GVF   C   SL+H
2849 Sbjct:  328 ----KKVSVPSYHVF-KGKEVMTRSLTSSPCSVYLSVSPELAKYKSGVFTGECG-KSLNH 381
2850
2851 Query:  295 GILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR---GKNTCGV 342
2852              +++VG        ++   YW+V+NSWG DWGE GY+ L R   G + CGV
2853 Sbjct:  382 AVVLVGEGYDEVTKKR---YWVVQNSWGTDWGENGYMRLERTNMGTDKCGV 429
2854
2855
2856 >sp|P25805|CYSP_PLAFA THROPHOZOITE CYSTEINE PROTEINASE PRECURSOR (TCP)
2857           Length = 569
2858
2859  Score =  141 bits (351), Expect = 3e-33
2860  Identities = 107/367 (29%), Positives = 169/367 (45%), Gaps = 62/367 (16%)
2861
2862 Query:  27  SQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSS 85
2863             S+F +F  + NK Y + +E + +FEIFK N   I+  N   +N  A  K  VN+F+D S
2864 Sbjct:  223 SKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHN--KLNKNAMYKKKVNQFSDYSE 280
2865
2866 Query:  86  DEFKNYYLN----NKEAIFTDDLPVADYLDD-----EFINSIPPEEQTAF-------DWR 129
2867             +E K Y+          I     P  ++L D     EF  +    E+  F       D+R
2868 Sbjct:  281 EELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYR 340
2869
2870 Query:  130 TRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEA 189
2871              +G V   K+QG CGSCW+F++ GN+E         ++S SEQ +VDC  +
2872 Sbjct:  341 EKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD--------- 391
2873
2874 Query:  190 CDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMI 249
2875 pattern 237                                                ****
2876              + GC+GG    ++ Y+++N  +     Y Y A+    C     N   + +  +S+   +
2877 Sbjct:  392 -NFGCDGGHPFYSFLYVLQN-ELCLGDEYKYKAKDDMFC----LNYRCKRKVSLSSIGAV 445
2878
2879 Query:  250 PKNETVMAGYIVSTGPLAIAADA-VEWQFYIGGVFDIPCNPNSLDHGILIVGY------- 301
2880              +N+ ++A  +   GPL++      ++  Y  GV++  C+   L+H +L+VGY
2881 Sbjct:  446 KENQLILA--LNEVGPLSVNVGVNNDFVAYSEGVYNGTCS-EELNHSVLLVGYGQVEKTK 502
2882
2883 Query:  302 -------SAKNTIFRKNMP------YWIVKNSWGADWGEQGYIYLRRGKN----TCGVSN 344
2884                       NT    N P      YWI+KNSW   WGE G++ L R KN     CG+
2885 Sbjct:  503 LNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRLSRNKNGDNVFCGIGE 562
2886
2887 Query:  345 FVSTSII 351
2888              V   I+
2889 Sbjct:  563 EVFYPIL 569
2890
2891
2892 >sp|P14518|BROM_ANACO BROMELAIN, STEM
2893           Length = 212
2894
2895  Score =  139 bits (348), Expect = 6e-33
2896  Identities = 81/224 (36%), Positives = 113/224 (50%), Gaps = 31/224 (13%)
2897
2898 Query:  125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEY 184
2899             + DWR  GAVT VKNQ  CG+CW+F+    VE  + I +  L  LSEQ ++DC
2900 Sbjct:  5   SIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC------- 57
2901
2902 Query:  185 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKIS 244
2903 pattern 237                                                     ****
2904                 A   GC GG +  A+ +II N G+ + + YPY A  GT C  +    G    A I+
2905 Sbjct:  58  ----AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGT-CKTD----GVPNSAYIT 108
2906
2907 Query:  245 NFTMIPKNETVMAGYIVSTGPLAIAADA-VEWQFYIGGVFDIPCNPNSLDHGILIVGYSA 303
2908              +  +P+N      Y VS  P+ +A DA   +Q+Y  GVF+ PC   SL+H +  +GY
2909 Sbjct:  109 GYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVFNGPCG-TSLNHAVTAIGYGQ 167
2910
2911 Query:  304 KNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR----GKNTCGVS 343
2912              + I+ K          WGA WGE GYI + R        CG++
2913 Sbjct:  168 DSIIYPK---------KWGAKWGEAGYIRMARDVSSSSGICGIA 202
2914
2915
2916 >sp|P16311|MMAL_DERFA MAJOR MITE FECAL ALLERGEN DER F 1 PRECURSOR (DER F I)
2917           Length = 321
2918
2919  Score =  138 bits (345), Expect = 1e-32
2920  Identities = 115/352 (32%), Positives = 157/352 (43%), Gaps = 52/352 (14%)
2921
2922 Query:  7   FVLAVFTVFVSSRGIP-PEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLI 65
2923             FVLA+ ++ V S     P     F EF+  FNK Y+    +E  E+ + N   +E L  +
2924 Sbjct:  3   FVLAIASLLVLSTVYARPASIKTFEEFKKAFNKNYAT---VEEEEVARKNF--LESLKYV 57
2925
2926 Query:  66  AINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEF----INSIPPE 121
2927               N     K  +N  +DLS DEFKN YL + EA   + L     L+ E     INS+
2928 Sbjct:  58  EAN-----KGAINHLSDLSLDEFKNRYLMSAEAF--EQLKTQFDLNAETSACRINSVNVP 110
2929
2930 Query:  122 EQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHEC 181
2931              +   D R+   VTP++ QG CGSCW+FS     E  +   +N  + LSEQ LVDC
2932 Sbjct:  111 SE--LDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC---- 164
2933
2934 Query:  182 MEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQA 241
2935 pattern 237                                                        ****
2936                    A   GC+G   P    YI +NG ++ E SYPY A        NS + G
2937 Sbjct:  165 -------ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVAREQRCRRPNSQHYG----- 211
2938
2939 Query:  242 KISNFTMIPKNETVMAGYIVSTGPLAIAA-----DAVEWQFYIGGVF---DIPCNPNSLD 293
2940              ISN+  I   +       ++    AIA      D   +Q Y G      D    PN
2941 Sbjct:  212 -ISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNY-- 268
2942
2943 Query:  294 HGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNF 345
2944             H + IVGY +      +   YWIV+NSW   WG+ GY Y + G N   +  +
2945 Sbjct:  269 HAVNIVGYGS-----TQGDDYWIVRNSWDTTWGDSGYGYFQAGNNLMMIEQY 315
2946
2947
2948 >sp|P42666|CYSP_PLAVI CYSTEINE PROTEINASE PRECURSOR
2949           Length = 583
2950
2951  Score =  129 bits (320), Expect = 1e-29
2952  Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 84/370 (22%)
2953
2954 Query:  27  SQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSS 85
2955             S+F  F +K+ + Y    E +E+++ FK N  KI++ N          K  VN+F+D S
2956 Sbjct:  235 SKFFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHN----ETNQMYKMKVNQFSDYSK 290
2957
2958 Query:  86  DEFKNYYLNNKEAIFTDDLPVADYLDDEFI--------------------NSIPPEEQTA 125
2959              +F++Y        F   +P+ D+L  +++                     ++  +
2960 Sbjct:  291 KDFESY--------FRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEI 342
2961
2962 Query:  126 FDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNK-LVSLSEQNLVDCDHECMEY 184
2963              D+R +G V   K+QG CGSCW+F++ GNVE  +    NK +++LSEQ +VDC
2964 Sbjct:  343 LDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC------- 395
2965
2966 Query:  185 EGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKIS 244
2967 pattern 237                                                     ****
2968                   + GC+GG    ++ Y I+N GI     Y Y A     C     N   + +  +S
2969 Sbjct:  396 ---SKLNFGCDGGHPFYSFIYAIEN-GICMGDDYKYKAMDNLFC----LNYRCKNKVTLS 447
2970
2971 Query:  245 NFTMIPKNETVMAGYIVSTGPLAIAADAV-EWQFYIGGVFDIPCNPNSLDHGILIVGYS- 302
2972             +   + +NE + A  +   GP+++      ++ FY GG+F+  C    L+H +L+VGY
2973 Sbjct:  448 SVGGVKENELIRA--LNEVGPVSVNVGVTDDFSFYGGGIFNGTCT-EELNHSVLLVGYGQ 504
2974
2975 Query:  303 -AKNTIFRKN-------------------------MPYWIVKNSWGADWGEQGYIYLRRG 336
2976                + IF++                            YWI+KNSW   WGE G++ + R
2977 Sbjct:  505 VQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENGFMRISRN 564
2978
2979 Query:  337 KN----TCGV 342
2980             K      CG+
2981 Sbjct:  565 KEGDNVFCGI 574
2982
2983
2984 >sp|P08176|MMAL_DERPT MAJOR MITE FECAL ALLERGEN DER P 1 PRECURSOR (DER P I)
2985           Length = 320
2986
2987  Score =  121 bits (300), Expect = 3e-27
2988  Identities = 111/345 (32%), Positives = 151/345 (43%), Gaps = 57/345 (16%)
2989
2990 Query:  1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIE 60
2991             MK++L     +    V +R   P     F E++  FNK Y+     E  E  + N   +E
2992 Sbjct:  1   MKIVLAIASLLALSAVYAR---PSSIKTFEEYKKAFNKSYAT---FEDEEAARKNF--LE 52
2993
2994 Query:  61  ELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEF----IN 116
2995              +  +  N  A     +N  +DLS DEFKN +L + EA   + L     L+ E     IN
2996 Sbjct:  53  SVKYVQSNGGA-----INHLSDLSLDEFKNRFLMSAEAF--EHLKTQFDLNAETNACSIN 105
2997
2998 Query:  117 SIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVD 176
2999                P E    D R    VTP++ QG CGSCW+FS     E  +   +N+ + L+EQ LVD
3000 Sbjct:  106 GNAPAE---IDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVD 162
3001
3002 Query:  177 CDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG 236
3003             C           A   GC+G   P    YI  NG +Q ES Y Y A   +    N+   G
3004 Sbjct:  163 C-----------ASQHGCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQSCRRPNAQRFG 210
3005
3006 Query:  237 PEEQAKISNFTMI-PKNETVMAGYIVSTGPLAIAA-----DAVEWQFYIGGVF---DIPC 287
3007 pattern 237 ****
3008                   ISN+  I P N   +   +  T   AIA      D   ++ Y G      D
3009 Sbjct:  211 ------ISNYCQIYPPNVNKIREALAQTHS-AIAVIIGIKDLDAFRHYDGRTIIQRDNGY 263
3010
3011 Query:  288 NPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIY 332
3012              PN   H + IVGYS       + + YWIV+NSW  +WG+ GY Y
3013 Sbjct:  264 QPNY--HAVNIVGYSN-----AQGVDYWIVRNSWDTNWGDNGYGY 301
3014
3015
3016 >sp|P80067|CATC_RAT DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (DPPI) (CATHEPSIN C)
3017             (CATHEPSIN J) (DIPEPTIDYL TRANSFERASE)
3018           Length = 462
3019
3020  Score =  111 bits (274), Expect = 3e-24
3021  Identities = 83/260 (31%), Positives = 128/260 (48%), Gaps = 34/260 (13%)
3022
3023 Query:  105 PVADYLDDEFINSIPPEEQTAFDWRT-RGA--VTPVKNQGQCGSCWSFSTTGNVEGQHFI 161
3024             P+ D +  + + S+P     ++DWR  RG   V+PV+NQ  CGSC+SF++ G +E +  I
3025 Sbjct:  218 PITDEIQQQIL-SLPE----SWDWRNVRGINFVSPVRNQESCGSCYSFASIGMLEARIRI 272
3026
3027 Query:  162 SQNKLVS--LSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYP 219
3028               N   +  LS Q +V C              +GC+GG          ++ G+  E+ +P
3029 Sbjct:  273 LTNNSQTPILSPQEVVSCSPYA----------QGCDGGFPYLIAGKYAQDFGVVEENCFP 322
3030
3031 Query:  220 YTAETGTQCN--FNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQ 276
3032 pattern 237                    ****
3033             YTA T   C    N       E   +  F     NE +M   +V  GP+A+A +  + +
3034 Sbjct:  323 YTA-TDAPCKPKENCLRYYSSEYYYVGGFYG-GCNEALMKLELVKHGPMAVAFEVHDDFL 380
3035
3036 Query:  277 FYIGGVF-----DIPCNPNSL-DHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGY 330
3037              Y  G++       P NP  L +H +L+VGY  K+ +    + YWIVKNSWG+ WGE GY
3038 Sbjct:  381 HYHSGIYHHTGLSDPFNPFELTNHAVLLVGYG-KDPV--TGLDYWIVKNSWGSQWGESGY 437
3039
3040 Query:  331 IYLRRGKNTCGVSNFVSTSI 350
3041               +RRG + C + +    +I
3042 Sbjct:  438 FRIRRGTDECAIESIAMAAI 457
3043
3044
3045 >sp|P97821|CATC_MOUSE DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (DPPI) (CATHEPSIN C)
3046             (CATHEPSIN J) (DIPEPTIDYL TRANSFERASE)
3047           Length = 462
3048
3049  Score =  109 bits (270), Expect = 9e-24
3050  Identities = 91/335 (27%), Positives = 155/335 (46%), Gaps = 42/335 (12%)
3051
3052 Query:  34  DKFNKKYSH-----EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEF 88
3053             +K N   +H     E Y ER  ++  N   ++ +N +    K+ T     ++  +S  +
3054 Sbjct:  147 EKVNMNAAHLGGLQERYSER--LYTHNHNFVKAINTV---QKSWTATAYKEYEKMSLRDL 201
3055
3056 Query:  89  KNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRT-RGA--VTPVKNQGQCGS 145
3057                  +++        P+ D +  + +N   PE   ++DWR  +G   V+PV+NQ  CGS
3058 Sbjct:  202 IRRSGHSQRIPRPKPAPMTDEIQQQILNL--PE---SWDWRNVQGVNYVSPVRNQESCGS 256
3059
3060 Query:  146 CWSFSTTGNVEGQHFISQNKLVS--LSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 203
3061             C+SF++ G +E +  I  N   +  LS Q +V C              +GC+GG
3062 Sbjct:  257 CYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYA----------QGCDGGFPYLIA 306
3063
3064 Query:  204 NYIIKNGGIQTESSYPYTA-ETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVS 262
3065 pattern 237                                   ****
3066                 ++ G+  ES +PYTA ++  +   N       +   +  F     NE +M   +V
3067 Sbjct:  307 GKYAQDFGVVEESCFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYG-GCNEALMKLELVK 365
3068
3069 Query:  263 TGPLAIAADAVE-WQFYIGGVF-----DIPCNPNSL-DHGILIVGYSAKNTIFRKNMPYW 315
3070              GP+A+A +  + +  Y  G++       P NP  L +H +L+VGY          + YW
3071 Sbjct:  366 HGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVT---GIEYW 422
3072
3073 Query:  316 IVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
3074             I+KNSWG++WGE GY  +RRG + C + +    +I
3075 Sbjct:  423 IIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAI 457
3076
3077
3078 >sp|P25773|CATL_FELCA CATHEPSIN L (PROGESTERONE-DEPENDENT PROTEIN) (PDP)
3079           Length = 139
3080
3081  Score =  108 bits (267), Expect = 2e-23
3082  Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
3083
3084 Query:  196 GGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETV 255
3085 pattern 237                                          ****
3086             GGL  +A+ Y+  NGG+ +E SYPY A+ G  C +   N      A ++++  IP  E
3087 Sbjct:  1   GGLIDDAFQYVKDNGGLDSEESYPYHAQ-GDSCKYRPEN----SVANVTDYWDIPSKENE 55
3088
3089 Query:  256 MAGYIVSTGPLAIAADAV--EWQFYIGGVF-DIPCNPNSLDHGILIVGYSAKNTIFRKNM 312
3090             +   + + GP++ A DA    ++FY  G++ D  C+   +DHG+L+VGY A  T   +N
3091 Sbjct:  56  LMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADGTE-TENK 114
3092
3093 Query:  313 PYWIVKNSWGADWGEQGYIYLRRGK 337
3094              YWI+KNSWG DWG  GYI + + +
3095 Sbjct:  115 KYWIIKNSWGTDWGMDGYIKMAKDR 139
3096
3097
3098 >sp|Q26563|CATC_SCHMA CATHEPSIN C PRECURSOR
3099           Length = 454
3100
3101  Score =  108 bits (266), Expect = 3e-23
3102  Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
3103
3104 Query:  126 FDWRT-----RGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQN--KLVSLSEQNLVDCD 178
3105             FDW +     R  VTP++NQG CGSC++  +   +E +  +  N  +   LS Q +VDC
3106 Sbjct:  222 FDWTSPPDGSRSPVTPIRNQGICGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDCS 281
3107
3108 Query:  179 HECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNF--NSANIG 236
3109                          EGCNGG          ++ G+  +   PYT E   +C    N
3110 Sbjct:  282 ----------PYSEGCNGGFPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYY 331
3111
3112 Query:  237 PEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFDIPC-------- 287
3113 pattern 237 ****
3114               + + I  +     NE +M   ++S GP  +  +  E +QFY  G++
3115 Sbjct:  332 TTDYSYIGGYYGAT-NEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNF 390
3116
3117 Query:  288 NPNSL-DHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN 344
3118             NP  L +H +L+VGY           PYW VKNSWG +WGEQGY  + RG + CGV +
3119 Sbjct:  391 NPFELTNHAVLLVGYGVDKL---SGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVES 445
3120
3121
3122 >sp|P53634|CATC_HUMAN DIPEPTIDYL-PEPTIDASE I PRECURSOR (DPP-I) (DPPI) (CATHEPSIN C)
3123             (CATHEPSIN J) (DIPEPTIDYL TRANSFERASE)
3124           Length = 463
3125
3126  Score =  107 bits (265), Expect = 3e-23
3127  Identities = 75/235 (31%), Positives = 111/235 (46%), Gaps = 29/235 (12%)
3128
3129 Query:  124 TAFDWRTRGA---VTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVS--LSEQNLVDCD 178
3130             T++DWR       V+PV+NQ  CGSC+SF++ G +E +  I  N   +  LS Q +V C
3131 Sbjct:  233 TSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCS 292
3132
3133 Query:  179 HECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSA--NIG 236
3134                          +GC GG          ++ G+  E+ +PYT  T + C
3135 Sbjct:  293 QYA----------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTG-TDSPCKMKEDCFRYY 341
3136
3137 Query:  237 PEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFDI-----PCNPN 290
3138 pattern 237 ****
3139               E   +  F     NE +M   +V  GP+A+A +  + +  Y  G++       P NP
3140 Sbjct:  342 SSEYHYVGGFYG-GCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPF 400
3141
3142 Query:  291 SL-DHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN 344
3143              L +H +L+VGY   +      M YWIVKNSWG  WGE GY  +RRG + C + +
3144 Sbjct:  401 ELTNHAVLLVGYGTDSA---SGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIES 452
3145
3146
3147 >sp|P25780|EUM1_EURMA MITE GROUP I ALLERGEN EUR M 1 (EUR M I)
3148           Length = 211
3149
3150  Score = 99.8 bits (245), Expect = 7e-21
3151  Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
3152
3153 Query:  117 SIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVD 176
3154             S+P E     D R+   VTP++ QG CGSCW+FS   + E  +   +N  + L+EQ LVD
3155 Sbjct:  10  SLPSE----LDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVD 65
3156
3157 Query:  177 CDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG 236
3158             C           A   GC+G   P    YI +NG +Q E  YPY A   +    N+   G
3159 Sbjct:  66  C-----------ASQNGCHGDTIPRGIEYIQQNGVVQ-EHYYPYVAREQSCHRPNAQRYG 113
3160
3161 Query:  237 PEEQAKISNFTMIPKNETVMAGYIVSTGPLAI---AADAVEWQFYIGGVF---DIPCNPN 290
3162 pattern 237 ****
3163              +   +IS     P +  +      +   +A+     D   ++ Y G      D    PN
3164 Sbjct:  114 LKNYCQISP----PDSNKIRQALTQTHTAVAVIIGIKDLNAFRHYDGRTIMQHDNGYQPN 169
3165
3166 Query:  291 SLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKN 338
3167                H + IVGY   NT   + + YWIV+NSW   WG+ GY Y     N
3168 Sbjct:  170 Y--HAVNIVGYG--NT---QGVDYWIVRNSWDTTWGDNGYGYFAANIN 210
3169
3170
3171 >sp|Q23894|CYS3_DICDI CYSTEINE PROTEINASE 3 (CYSTEINE PROTEINASE II)
3172           Length = 151
3173
3174  Score = 94.8 bits (232), Expect = 2e-19
3175  Identities = 60/158 (37%), Positives = 87/158 (54%), Gaps = 15/158 (9%)
3176
3177 Query: 41  SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIF 100
3178            +H+E++ R+E FK N+  +   N    +  + T  G+N+ ADLS++E++  YL  +  I
3179 Sbjct: 1   THKEFMPRYEEFKKNMDYVHNWN----SKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIK 56
3180
3181 Query: 101 TDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHF 160
3182             +     +      +N    ++    DWR + AVTPVK+QGQCGSC   STTG+VEG
3183 Sbjct: 57  LNGYHKRNL--GLRLNRPHFKQPLNVDWREKDAVTPVKDQGQCGSC-IISTTGSVEGVTA 113
3184
3185 Query: 161 ISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGL 198
3186            I   KLVSLSEQN++               +EGCNGGL
3187 Sbjct: 114 IKTGKLVSLSEQNILRL--------SSSFGNEGCNGGL 143
3188
3189
3190 >sp|P43509|CPR5_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 5 PRECURSOR
3191           Length = 344
3192
3193  Score = 90.9 bits (222), Expect = 4e-18
3194  Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
3195
3196 Query:  108 DYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLV 167
3197             D +  E  ++IP        W    ++  +++Q  CGSCW+F+    +  +  I+ N  V
3198 Sbjct:  72  DIVATEVSDAIPDHFDARDQWPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAV 131
3199
3200 Query:  168 S--LSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSY------- 218
3201             +  LS ++L+ C        G  +C  GC GG    A+ + +K+G + T  SY
3202 Sbjct:  132 NTLLSSEDLLSC------CTGMFSCGNGCEGGYPIQAWKWWVKHG-LVTGGSYETQFGCK 184
3203
3204 Query:  219 PY-----------------------TAETGTQCNFNSANIGPEEQAKISNFTM--IPKNE 253
3205 pattern 237                                          ****
3206             PY                       T +    C   +    P  Q K    T   + K
3207 Sbjct:  185 PYSIAPCGETVNGVKWPACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKV 244
3208
3209 Query:  254 TVMAGYIVSTGPLAIAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNM 312
3210               +   I++ GP+ +A    E +  Y  GV+      +   H + I+G+   N
3211 Sbjct:  245 EQIQTEILTNGPIEVAFTVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGVDN-----GT 299
3212
3213 Query:  313 PYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN 344
3214             PYW+V NSW   WGE+GY  + RG N CG+ +
3215 Sbjct:  300 PYWLVANSWNVAWGEKGYFRIIRGLNECGIEH 331
3216
3217
3218 >sp|P43508|CPR4_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 4 PRECURSOR
3219           Length = 335
3220
3221  Score = 90.5 bits (221), Expect = 5e-18
3222  Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 50/299 (16%)
3223
3224 Query:  82  DLSSDEFKNYYLNNK-EAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQ 140
3225             D++ ++ K   +  +  A  T D+ V  +  +E  ++IP        W    ++  +++Q
3226 Sbjct:  46  DITIEQVKKRLMRTEFVAPHTPDVEVVKHDINE--DTIPATFDARTQWPNCMSINNIRDQ 103
3227
3228 Query:  141 GQCGSCWSFSTTGNVEGQHFISQNKLVS--LSEQNLVDCDHECMEYEGEEACDEGCNGGL 198
3229               CGSCW+F+       +  I+ N  V+  LS ++++ C   C        C  GC GG
3230 Sbjct:  104 SDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSC---CSN------CGYGCEGGY 154
3231
3232 Query:  199 QPNAYNYIIKNG---GIQTESSYPYTAETGTQCNFNSANI--------GPEEQAKISNFT 247
3233 pattern 237                                                  ****
3234               NA+ Y++K+G   G   E+ +     +   C     N+        G +  A ++  T
3235 Sbjct:  155 PINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCT 214
3236
3237 Query:  248 -------------------MIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFDIPC 287
3238                                 + K  + +   I++ GP+  A    E +  Y  GV+
3239 Sbjct:  215 NKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTT 274
3240
3241 Query:  288 NPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFV 346
3242                   H I I+G+   N       PYW+V NSW  +WGE GY  + RG N CG+ + V
3243 Sbjct:  275 GQELGGHAIRILGWGTDN-----GTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAV 328
3244
3245
3246 >sp|P05993|PAP5_CARPA CYSTEINE PROTEINASE (CLONE PLBPC13)
3247           Length = 96
3248
3249  Score = 90.5 bits (221), Expect = 5e-18
3250  Identities = 43/87 (49%), Positives = 55/87 (62%), Gaps = 2/87 (2%)
3251
3252 Query: 264 GPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSW 321
3253            GPLA+A +A   Q YIGGV         L+HG+L+VGY +     I  K  PYW++KNSW
3254 Sbjct: 1   GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSW 60
3255
3256 Query: 322 GADWGEQGYIYLRRGKNTCGVSNFVST 348
3257            G +WGE GY  + RG+N CGV + VST
3258 Sbjct: 61  GENWGENGYYKICRGRNICGVDSMVST 87
3259
3260
3261 >sp|P07688|CATB_BOVIN CATHEPSIN B PRECURSOR
3262           Length = 335
3263
3264  Score = 88.5 bits (216), Expect = 2e-17
3265  Identities = 65/259 (25%), Positives = 105/259 (40%), Gaps = 47/259 (18%)
3266
3267 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSL---SEQNL 174
3268             +P        W     +  +++QG CGSCW+F     +  +  I  N  V++   +E  L
3269 Sbjct:  80  LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDML 139
3270
3271 Query:  175 VDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ--------------------- 213
3272               C  EC          +GCNGG    A+N+  K G +
3273 Sbjct:  140 TCCGGEC---------GDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHH 190
3274
3275 Query:  214 -TESSYPYTAETGT-QCNFN-----SANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
3276 pattern 237                               ****
3277                S  P T E  T +CN       S +   ++    S++++    + +MA  I   GP+
3278 Sbjct:  191 VNGSRPPCTGEGDTPKCNKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAE-IYKNGPV 249
3279
3280 Query:  267 AIAADAV-EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADW 325
3281               A     ++  Y  GV+          H I I+G+  +N       PYW+V NSW  DW
3282 Sbjct:  250 EGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGVEN-----GTPYWLVGNSWNTDW 304
3283
3284 Query:  326 GEQGYIYLRRGKNTCGVSN 344
3285             G+ G+  + RG++ CG+ +
3286 Sbjct:  305 GDNGFFKILRGQDHCGIES 323
3287
3288
3289 >sp|P00787|CATB_RAT CATHEPSIN B PRECURSOR (CATHEPSIN B1) (RSG-2)
3290           Length = 339
3291
3292  Score = 87.4 bits (213), Expect = 4e-17
3293  Identities = 66/265 (24%), Positives = 113/265 (41%), Gaps = 45/265 (16%)
3294
3295 Query:  117 SIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSL--SEQNL 174
3296             ++P        W     +  +++QG CGSCW+F     +  +  I  N  V++  S ++L
3297 Sbjct:  79  NLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDL 138
3298
3299 Query:  175 VDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIK----NGGIQTE--------------- 215
3300             + C   C        C +GCNGG    A+N+  +    +GG+
3301 Sbjct:  139 LTC---C-----GIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPCEHH 190
3302
3303 Query:  216 ---SSYPYTAETGT-QCNFN-----SANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
3304 pattern 237                               ****
3305                S  P T E  T +CN       S +   ++    +++++    + +MA  I   GP+
3306 Sbjct:  191 VNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAE-IYKNGPV 249
3307
3308 Query:  267 AIAADAV-EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADW 325
3309               A     ++  Y  GV+          H I I+G+  +N +     PYW+V NSW  DW
3310 Sbjct:  250 EGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENGV-----PYWLVANSWNVDW 304
3311
3312 Query:  326 GEQGYIYLRRGKNTCGVSNFVSTSI 350
3313             G+ G+  + RG+N CG+ + +   I
3314 Sbjct:  305 GDNGFFKILRGENHCGIESEIVAGI 329
3315
3316
3317 >sp|P25807|CYS1_CAEEL GUT-SPECIFIC CYSTEINE PROTEINASE PRECURSOR
3318           Length = 329
3319
3320  Score = 87.0 bits (212), Expect = 5e-17
3321  Identities = 66/288 (22%), Positives = 117/288 (39%), Gaps = 38/288 (13%)
3322
3323 Query:  82  DLSSDEFKNYYLNNK-EAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQ 140
3324             +++ +E K   ++ K  A  +D++   +   +  + S+P    +   W    ++  +++Q
3325 Sbjct:  50  EITEEEMKFKLMDGKYAAAHSDEIRATE--QEVVLASVPATFDSRTQWSECKSIKLIRDQ 107
3326
3327 Query:  141 GQCGSCWSFSTTGNVEGQHFISQNKLVS--LSEQNLVDCDHECMEYEGEEACDEGCNGGL 198
3328               CGSCW+F     +  +  I         +S  +L+ C   C       +C  GC GG
3329 Sbjct:  108 ATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSC---C-----GSSCGNGCEGGY 159
3330
3331 Query:  199 QPNAYNY-----IIKNGGIQTESSYPYTAETGTQ----------CNFNSANIGPEEQAKI 243
3332 pattern 237                                                      ****
3333                A  +     ++  G        PY     T           C+ +  +      AK
3334 Sbjct:  160 PIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKD 219
3335
3336 Query:  244 SNFTM----IPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFDIPCNPNSLDHGILI 298
3337              +F +    +PKN   +   I + GP+  A    E +  Y  GV+          H I I
3338 Sbjct:  220 KHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKI 279
3339
3340 Query:  299 VGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFV 346
3341             +G+  ++       PYW+V NSWG +WGE G+  + RG + CG+ + V
3342 Sbjct:  280 IGWGTES-----GSPYWLVANSWGVNWGESGFFKIYRGDDQCGIESAV 322
3343
3344
3345 >sp|P07858|CATB_HUMAN CATHEPSIN B PRECURSOR (CATHEPSIN B1) (APP SECRETASE)
3346           Length = 339
3347
3348  Score = 86.2 bits (210), Expect = 9e-17
3349  Identities = 68/285 (23%), Positives = 110/285 (37%), Gaps = 55/285 (19%)
3350
3351 Query:  96  KEAIFTDDLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNV 155
3352             +  +FT+DL             +P        W     +  +++QG CGSCW+F     +
3353 Sbjct:  70  QRVMFTEDL------------KLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAI 117
3354
3355 Query:  156 EGQHFISQNKLVSL--SEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ 213
3356               +  I  N  VS+  S ++L+ C   C        C +GCNGG    A+N+  + G +
3357 Sbjct:  118 SDRICIHTNAHVSVEVSAEDLLTC---C-----GSMCGDGCNGGYPAEAWNFWTRKGLVS 169
3358
3359 Query:  214 ----------------------TESSYPYTAETGTQ-----CNFNSANIGPEEQAKISNF 246
3360 pattern 237                                                   ****
3361                                     S  P T E  T      C    +    +++    N
3362 Sbjct:  170 GGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNS 229
3363
3364 Query:  247 TMIPKNETVMAGYIVSTGPLAIAADAV-EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN 305
3365               +  +E  +   I   GP+  A     ++  Y  GV+          H I I+G+  +N
3366 Sbjct:  230 YSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVEN 289
3367
3368 Query:  306 TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 350
3369                    PYW+V NSW  DWG+ G+  + RG++ CG+ + V   I
3370 Sbjct:  290 -----GTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 329
3371
3372
3373 >sp|P43157|CYSP_SCHJA CATHEPSIN B-LIKE CYSTEINE PROTEINASE PRECURSOR (ANTIGEN SJ31)
3374           Length = 342
3375
3376  Score = 85.4 bits (208), Expect = 2e-16
3377  Identities = 64/271 (23%), Positives = 109/271 (39%), Gaps = 57/271 (21%)
3378
3379 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQ--NKLVSLSEQNLV 175
3380             IP +  +   W    +++ +++Q +CGSCW+F     +  +  I     +   LS  +L+
3381 Sbjct:  90  IPSQFDSRKKWPHCKSISQIRDQSRCGSCWAFGAVEAMTDRICIQSGGGQSAELSALDLI 149
3382
3383 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGI---------------------QT 214
3384              C   C +      C +GC GG    A++Y +K G +                      T
3385 Sbjct:  150 SC---CKD------CGDGCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPYPFPKCEHHT 200
3386
3387 Query:  215 ESSYP-------------YTAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIV 261
3388 pattern 237                                    ****
3389             +  YP              T + G +  +       +E   + N      NE V+   I+
3390 Sbjct:  201 KGKYPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQN------NEKVIQRDIM 254
3391
3392 Query:  262 STGPLAIAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNS 320
3393               GP+  A D  E +  Y  G++          H I I+G+  +     K  PYW++ NS
3394 Sbjct:  255 MYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGVE-----KRTPYWLIANS 309
3395
3396 Query:  321 WGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
3397             W  DWGE+G   + RG++ C + + V   +I
3398 Sbjct:  310 WNEDWGEKGLFRMVRGRDECSIESDVVAGLI 340
3399
3400
3401 >sp|P43233|CATB_CHICK CATHEPSIN B PRECURSOR (CATHEPSIN B1)
3402           Length = 340
3403
3404  Score = 85.4 bits (208), Expect = 2e-16
3405  Identities = 66/265 (24%), Positives = 111/265 (40%), Gaps = 46/265 (17%)
3406
3407 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSL--SEQNLV 175
3408             +P    T   W     ++ +++QG CGSCW+F     +  +  +  N  VS+  S ++L+
3409 Sbjct:  80  LPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTNAKVSVEVSAEDLL 139
3410
3411 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ---------------------- 213
3412              C   C    G E C  GCNGG    A+ Y  + G +
3413 Sbjct:  140 SC---C----GFE-CGMGCNGGYPSGAWRYWTERGLVSGGLYDSHVGCRAYTIPPCEHHV 191
3414
3415 Query:  214 TESSYPYTAETGT--QCNFN-----SANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPL 266
3416 pattern 237                               ****
3417               S  P T E G   +C+ +     S +   ++   I+++  +P++E  +   I   GP+
3418 Sbjct:  192 NGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYG-VPRSEKEIMAEIYKNGPV 250
3419
3420 Query:  267 AIAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADW 325
3421               A    E +  Y  GV+          H I I+G+  +N       PYW+  NSW  DW
3422 Sbjct:  251 EGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGVEN-----GTPYWLAANSWNTDW 305
3423
3424 Query:  326 GEQGYIYLRRGKNTCGVSNFVSTSI 350
3425             G  G+  + RG++ CG+ + +   +
3426 Sbjct:  306 GITGFFKILRGEDHCGIESEIVAGV 330
3427
3428
3429 >sp|P43510|CPR6_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 6 PRECURSOR
3430           Length = 379
3431
3432  Score = 85.0 bits (207), Expect = 2e-16
3433  Identities = 71/265 (26%), Positives = 116/265 (42%), Gaps = 53/265 (20%)
3434
3435 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNK--LVSLSEQNLV 175
3436             IP    +  +W    ++  +++Q  CGSCW+F     +  +  I+ +    V+LS  +L+
3437 Sbjct:  105 IPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLL 164
3438
3439 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQ------CN 229
3440              C   C      ++C  GCNGG    A+ Y +K+G I T S+Y  TA  G +      C
3441 Sbjct:  165 SC---C------KSCGFGCNGGDPLAAWRYWVKDG-IVTGSNY--TANNGCKPYPFPPCE 212
3442
3443 Query:  230 FNSANIGPE------------EQAKISNFTMIPKNETVMAGY---------------IVS 262
3444 pattern 237        **            **
3445              +S     +            E+  +S++T    +E    G                +++
3446 Sbjct:  213 HHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMT 272
3447
3448 Query:  263 TGPLAIAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSW 321
3449              GPL IA +  E +  Y GGV+          H + ++G+   + I     PYW V NSW
3450 Sbjct:  273 HGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGIDDGI-----PYWTVANSW 327
3451
3452 Query:  322 GADWGEQGYIYLRRGKNTCGVSNFV 346
3453               DWGE G+  + RG + CG+ + V
3454 Sbjct:  328 NTDWGEDGFFRILRGVDECGIESGV 352
3455
3456
3457 >sp|P25792|CYSP_SCHMA CATHEPSIN B-LIKE CYSTEINE PROTEINASE PRECURSOR (ANTIGEN SM31)
3458           Length = 340
3459
3460  Score = 84.6 bits (206), Expect = 3e-16
3461  Identities = 64/260 (24%), Positives = 107/260 (40%), Gaps = 45/260 (17%)
3462
3463 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQN--KLVSLSEQNLV 175
3464             IP    +   W    ++  +++Q +CGSCWSF     +  +  I     + V LS  +L+
3465 Sbjct:  89  IPSNFDSRKKWPGCKSIATIRDQSRCGSCWSFGAVEAMSDRSCIQSGGKQNVELSAVDLL 148
3466
3467 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTA---ETGTQCNFNS 232
3468              C   C      E+C  GC GG+   A++Y +K G +   S   +T        +C  ++
3469 Sbjct:  149 TC---C------ESCGLGCEGGILGPAWDYWVKEGIVTASSKENHTGCEPYPFPKCEHHT 199
3470
3471 Query:  233 ANIGPEEQAKISN---------------FTM----------IPKNETVMAGYIVSTGPLA 267
3472 pattern 237     ****
3473                 P   +KI N               +T           +  +E  +   I+  GP+
3474 Sbjct:  200 KGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVE 259
3475
3476 Query:  268 IAADAVE-WQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWG 326
3477              +    E +  Y  G++          H I I+G+  +N       PYW++ NSW  DWG
3478 Sbjct:  260 ASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGVEN-----KTPYWLIANSWNEDWG 314
3479
3480 Query:  327 EQGYIYLRRGKNTCGVSNFV 346
3481             E GY  + RG++ C + + V
3482 Sbjct:  315 ENGYFRIVRGRDECSIESEV 334
3483
3484
3485 >sp|P10605|CATB_MOUSE CATHEPSIN B PRECURSOR (CATHEPSIN B1)
3486           Length = 339
3487
3488  Score = 84.6 bits (206), Expect = 3e-16
3489  Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 43/253 (16%)
3490
3491 Query:  128 WRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSL--SEQNLVDCDHECMEYE 185
3492             W     +  +++QG CGSCW+F     +  +  I  N  V++  S ++L+ C   C
3493 Sbjct:  90  WSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTNGRVNVEVSAEDLLTC---C---- 142
3494
3495 Query:  186 GEEACDEGCNGGLQPNAYNYIIK----NGGIQTE------------------SSYPYTAE 223
3496                 C +GCNGG    A+++  K    +GG+                     S  P T E
3497 Sbjct:  143 -GIQCGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPPCEHHVNGSRPPCTGE 201
3498
3499 Query:  224 TGT-QCNFN-SANIGPE-EQAKISNFTMIPKNETV--MAGYIVSTGPLAIAADAV-EWQF 277
3500 pattern 237                ** **
3501               T +CN +  A   P  ++ K   +T    + +V  +   I   GP+  A     ++
3502 Sbjct:  202 GDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVEGAFTVFSDFLT 261
3503
3504 Query:  278 YIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGK 337
3505             Y  GV+          H I I+G+  +N +     PYW+  NSW  DWG+ G+  + RG+
3506 Sbjct:  262 YKSGVYKHEAGDMMGGHAIRILGWGVENGV-----PYWLAANSWNLDWGDNGFFKILRGE 316
3507
3508 Query:  338 NTCGVSNFVSTSI 350
3509             N CG+ + +   I
3510 Sbjct:  317 NHCGIESEIVAGI 329
3511
3512
3513 >sp|P25802|CYS1_OSTOS CATHEPSIN B-LIKE CYSTEINE PROTEINASE 1 PRECURSOR
3514           Length = 341
3515
3516  Score = 79.6 bits (193), Expect = 9e-15
3517  Identities = 63/270 (23%), Positives = 106/270 (38%), Gaps = 46/270 (17%)
3518
3519 Query:  103 DLPVADYLDDEFINSIPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFIS 162
3520             D  V D   +E  + IP        W    ++  + +Q  CGSCW+ S+   +  +  I+
3521 Sbjct:  76  DEEVEDEELEENNDDIPESYDPRIQWANCSSLFHIPDQANCGSCWAVSSAAAMSDRICIA 135
3522
3523 Query:  163 QN--KLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNY-----IIKNGGIQTE 215
3524                 K V +S Q++V C   C        C +GC GG   +A+ +     ++  G   T+
3525 Sbjct:  136 SKGAKQVLISAQDVVSC---CTW------CGDGCEGGWPISAFRFHADEGVVTGGDYNTK 186
3526
3527 Query:  216 SSY-PYTAET----GTQCNFNSANIGPEEQAKISNFTMI------PKNETVMAGYIVSTG 264
3528 pattern 237                           ****
3529              S  PY        G +  +    +G  +  +     ++      P +      Y +
3530 Sbjct:  187 GSCRPYEIHPCGHHGNETYYGEC-VGMADTPRCKRRCLLGYPKSYPSDRYYKKAYQLKNS 245
3531
3532 Query:  265 PLAIAADAV-------------EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKN 311
3533               AI  D +             ++  Y  G++       +  H + ++G+  +     K
3534 Sbjct:  246 VKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGLHAVKVIGWGEE-----KG 300
3535
3536 Query:  312 MPYWIVKNSWGADWGEQGYIYLRRGKNTCG 341
3537              PYWIV NSW  DWGE G+  + RG N CG
3538 Sbjct:  301 TPYWIVANSWHDDWGENGFFRMHRGSNDCG 330
3539
3540
3541 >sp|P25793|CYS2_HAECO CATHEPSIN B-LIKE CYSTEINE PROTEINASE 2 PRECURSOR
3542           Length = 342
3543
3544  Score = 78.4 bits (190), Expect = 2e-14
3545  Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 47/266 (17%)
3546
3547 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQN--KLVSLSEQNLV 175
3548             IPP       W+       +++Q  CGSCW+ ST   +  +  I+    K V++S  +++
3549 Sbjct:  87  IPPSYDPRDVWKNCTTFY-IRDQANCGSCWAVSTAAAISDRICIASKAEKQVNISATDIM 145
3550
3551 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ------TESSYPY--------- 220
3552              C   C        C +GC GG    A+ Y I +G +        +   PY
3553 Sbjct:  146 TC---C-----RPQCGDGCEGGWPIEAWKYFIYDGVVSGGEYLTKDVCRPYPIHPCGHHG 197
3554
3555 Query:  221 -------------TAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLA 267
3556 pattern 237                              ****
3557                          T     +C      +   ++    +  ++ ++   +   I+  GP+
3558 Sbjct:  198 NDTYYGECRGTAPTPPCKRKCRPGVRKMYRIDKRYGKDAYIVKQSVKAIQSEILKNGPV- 256
3559
3560 Query:  268 IAADAV--EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADW 325
3561             +A+ AV  +++ Y  G++          H + ++G+  +N     N  +W++ NSW  DW
3562 Sbjct:  257 VASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWGNEN-----NTDFWLIANSWHNDW 311
3563
3564 Query:  326 GEQGYIYLRRGKNTCGVSNFVSTSII 351
3565             GE+GY  + RG N CG+   ++  I+
3566 Sbjct:  312 GEKGYFRIVRGSNDCGIEGTIAAGIV 337
3567
3568
3569 >sp|P19092|CYS1_HAECO CATHEPSIN B-LIKE CYSTEINE PROTEINASE 1 PRECURSOR
3570           Length = 342
3571
3572  Score = 77.6 bits (188), Expect = 4e-14
3573  Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 47/266 (17%)
3574
3575 Query:  118 IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQN--KLVSLSEQNLV 175
3576             IPP       W+       +++Q  CGSCW+ ST   +  +  I+    K V++S  +++
3577 Sbjct:  87  IPPSYDPRDVWKNCTTFY-IRDQANCGSCWAVSTAAAISDRICIASKAEKQVNISATDIM 145
3578
3579 Query:  176 DCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQ------TESSYPY--------- 220
3580              C   C        C +GC GG    A+ Y I +G +        +   PY
3581 Sbjct:  146 TC---C-----RPQCGDGCEGGWPIEAWKYFIYDGVVSGGEYLTKDVCRPYPIHPCGHHG 197
3582
3583 Query:  221 -------------TAETGTQCNFNSANIGPEEQAKISNFTMIPKNETVMAGYIVSTGPLA 267
3584 pattern 237                              ****
3585                          T     +C      +   ++    +  ++ ++   +   I+  GP+
3586 Sbjct:  198 NDTYYGECRGTAPTPPCKRKCRPGVRKMYRIDKRYGKDAYIVKQSVKAIQSEILRNGPV- 256
3587
3588 Query:  268 IAADAV--EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADW 325
3589             +A+ AV  +++ Y  G++          H + ++G+  +N     N  +W++ NSW  DW
3590 Sbjct:  257 VASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWGNEN-----NTDFWLIANSWHNDW 311
3591
3592 Query:  326 GEQGYIYLRRGKNTCGVSNFVSTSII 351
3593             GE+GY  + RG N CG+   ++  I+
3594 Sbjct:  312 GEKGYFRIIRGTNDCGIEGTIAAGIV 337
3595
3596
3597 >sp|P43507|CPR3_CAEEL CATHEPSIN B-LIKE CYSTEINE PROTEINASE 3 PRECURSOR
3598           Length = 370
3599
3600  Score = 73.3 bits (177), Expect = 7e-13
3601  Identities = 56/248 (22%), Positives = 98/248 (38%), Gaps = 39/248 (15%)
3602
3603 Query:  128 WRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVS--LSEQNLVDCDHECMEYE 185
3604             W     +  ++NQ  CGSCW+F     +  +  I  N      +S ++++ C   C
3605 Sbjct:  102 WPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSC---C---- 154
3606
3607 Query:  186 GEEACDEGCNGGLQPNAYNYIIKNGGIQ---------------------TESSYPYTAET 224
3608                 C  GC GG    A  +   +G +                       ES+ P + +T
3609 Sbjct:  155 -GTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPYSFAPCTKNCPESTTP-SCKT 212
3610
3611 Query:  225 GTQCNFNSANIGPEEQAKISNFTMIP-KNETVMAGYIVSTGPLAIAADAVE-WQFYIGGV 282
3612 pattern 237             ****
3613               Q ++ +     ++    S + +   K+ T +   I   GP+  +    E +  Y  GV
3614 Sbjct:  213 TCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGV 272
3615
3616 Query:  283 FDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGV 342
3617             +          H + I+G+  +N +      YW++ NSWG  +GE+G+  +RRG N C +
3618 Sbjct:  273 YHYTSGKLVGGHAVKIIGWGVENGV-----DYWLIANSWGTSFGEKGFFKIRRGTNECQI 327
3619
3620 Query:  343 SNFVSTSI 350
3621                V   I
3622 Sbjct:  328 EGNVVAGI 335
3623
3624
3625 >sp|P13823|SERA_PLAFG SERINE-REPEAT ANTIGEN PROTEIN PRECURSOR (P126) (111 KD ANTIGEN)
3626           Length = 989
3627
3628  Score = 70.2 bits (169), Expect = 6e-12
3629  Identities = 63/247 (25%), Positives = 102/247 (40%), Gaps = 46/247 (18%)
3630
3631 Query:  137 VKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGE--EACDEGC 194
3632             V++QG C + W F++  ++E    +   +   +S   + +C      Y+GE  + CDEG
3633 Sbjct:  579 VEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANC------YKGEHKDRCDEGS 632
3634
3635 Query:  195 NGGLQPNAYNYIIKNGG-IQTESSYPYT-AETGTQC------------------NFNSAN 234
3636             +    P  +  II++ G +  ES+YPY   + G QC                  N N  N
3637 Sbjct:  633 S----PMEFLQIIEDYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPN 688
3638
3639 Query:  235 I----------GPEEQAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFD 284
3640 pattern 237             ****
3641                               +  F  I K E +  G +++     I A+ V    + G
3642 Sbjct:  689 SLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKGSVIAY----IKAENVMGYEFSGKKVQ 744
3643
3644 Query:  285 IPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSN 344
3645               C  ++ DH + IVGY        +   YWIV+NSWG  WG++GY  +     T    N
3646 Sbjct:  745 NLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCHFN 804
3647
3648 Query:  345 FVSTSII 351
3649             F+ + +I
3650 Sbjct:  805 FIHSVVI 811
3651
3652
3653 >sp|P32956|CC3_CARCN CYSTEINE PROTEINASE III (CC-III)
3654           Length = 43
3655
3656  Score = 60.9 bits (145), Expect = 4e-09
3657  Identities = 24/33 (72%), Positives = 27/33 (81%)
3658
3659 Query: 125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEG 157
3660            + DWR +GAVTPVKNQG CGSCW+FST   VEG
3661 Sbjct: 4   SIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEG 36
3662
3663
3664 >sp|P32957|CC4_CARCN CYSTEINE PROTEINASE IV (CC-IV)
3665           Length = 43
3666
3667  Score = 59.7 bits (142), Expect = 9e-09
3668  Identities = 24/33 (72%), Positives = 27/33 (81%)
3669
3670 Query: 125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEG 157
3671            + DWR +GAVTPVKNQG CGSCW+FST   VEG
3672 Sbjct: 4   SIDWRKKGAVTPVKNQGSCGSCWAFSTIVTVEG 36
3673
3674
3675 >sp|Q06544|CYS3_OSTOS CATHEPSIN B-LIKE CYSTEINE PROTEINASE 3
3676           Length = 174
3677
3678  Score = 59.3 bits (141), Expect = 1e-08
3679  Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
3680
3681 Query: 249 IPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIF 308
3682            I KN  V+AG+IV            ++  Y  G++       +  H + I+G+  +
3683 Sbjct: 87  IMKNGPVVAGFIVYE----------DFAHYKSGIYKHTAGRMTGGHAVKIIGWGKE---- 132
3684
3685 Query: 309 RKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 351
3686             K  PYW++ NSW  DWGE+G+  + RG N C +   V   I+
3687 Sbjct: 133 -KGTPYWLIANSWHDDWGEKGFYRMIRGINNCRIEEMVFAGIV 174
3688
3689
3690 >sp|P32954|CC1_CARCN CYSTEINE PROTEINASE I (CC-I)
3691           Length = 43
3692
3693  Score = 57.8 bits (137), Expect = 3e-08
3694  Identities = 22/33 (66%), Positives = 27/33 (81%)
3695
3696 Query: 125 AFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEG 157
3697            + DWR +GAVTPV+NQG CGSCW+FS+   VEG
3698 Sbjct: 4   SIDWRQKGAVTPVRNQGSCGSCWTFSSVAAVEG 36
3699
3700
3701 >sp|P32955|CC2_CARCN CYSTEINE PROTEINASE II (CC-II)
3702           Length = 43
3703
3704  Score = 56.2 bits (133), Expect = 1e-07
3705  Identities = 22/31 (70%), Positives = 25/31 (79%)
3706
3707 Query: 127 DWRTRGAVTPVKNQGQCGSCWSFSTTGNVEG 157
3708            DWR +GAVTPVK+Q  CGSCW+FST   VEG
3709 Sbjct: 6   DWRQKGAVTPVKDQNPCGSCWAFSTVATVEG 36
3710
3711
3712 >sp||CATL_CHICK_2 [Segment 2 of 2] CATHEPSIN L
3713           Length = 42
3714
3715  Score = 51.9 bits (122), Expect = 2e-06
3716  Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
3717
3718 Query: 314 YWIVKNSWGADWGEQGYIYLRRG-KNTCGVSNFVSTSII 351
3719            YWIVKNSWG  WG++GYIY+ +  KN CG++   S  ++
3720 Sbjct: 4   YWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 42
3721
3722
3723 >sp|P12399|CT2A_MOUSE CTLA-2-ALPHA PROTEIN PRECURSOR
3724           Length = 136
3725
3726  Score = 41.8 bits (96), Expect = 0.002
3727  Identities = 31/101 (30%), Positives = 50/101 (48%), Gaps = 4/101 (3%)
3728
3729 Query: 9   LAVFTVFVSSRGIPPEEQ--SQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIA 66
3730            L +  + + S   PP+    +++ E++ KF K Y+  E   R  +++ N  KIE  N
3731 Sbjct: 17  LLILCLGMMSAAPPPDPSLDNEWKEWKTKFAKAYNLNEERHRRLVWEENKKKIEAHNADY 76
3732
3733 Query: 67  INHKADTKFGVNKFADLSSDEFK-NYYLNN-KEAIFTDDLP 105
3734               K     G+N+F+DL+ +EFK N Y N+        DLP
3735 Sbjct: 77  EQGKTSFYMGLNQFSDLTPEEFKTNCYGNSLNRGEMAPDLP 117
3736
3737
3738 >sp|P05689|CATX_BOVIN CATHEPSIN
3739           Length = 73
3740
3741  Score = 40.2 bits (92), Expect = 0.006
3742  Identities = 15/40 (37%), Positives = 24/40 (59%), Gaps = 5/40 (12%)
3743
3744 Query: 292 LDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYI 331
3745            ++H + + G+   +      M YWIV+NSWG  WGE G++
3746 Sbjct: 9   INHIVSVAGWGVSD-----GMEYWIVRNSWGEPWGEHGWM 43
3747
3748
3749 >sp|P12400|CT2B_MOUSE CTLA-2-BETA PROTEIN PRECURSOR
3750           Length = 141
3751
3752  Score = 38.7 bits (88), Expect = 0.019
3753  Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
3754
3755 Query: 6   LFVLAVFTVFVSSRGIP-PEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNL 64
3756            +F+L +    +S+   P P   +++ E++  F K YS +E   R  +++ N  KIE  N
3757 Sbjct: 20  VFLLILCLGMMSAAPSPDPSLDNEWKEWKTTFAKAYSLDEERHRRLMWEENKKKIEAHNA 79
3758
3759 Query: 65  IAINHKADTKFGVNKFADLSSDEFK 89
3760                 K     G+N+F+DL+ +EF+
3761 Sbjct: 80  DYERGKTSFYMGLNQFSDLTPEEFR 104
3762
3763
3764 >sp|P23897|HSER_RAT HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) (INTESTINAL
3765            GUANYLATE CYCLASE) (STA RECEPTOR)
3766           Length = 1072
3767
3768  Score = 35.6 bits (80), Expect = 0.16
3769  Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
3770
3771 Query: 15  FVSSRGIPPEEQSQFLEFQDK----FNKKYSHEEYLERFEIFKSNL-GKIEELNLIAINH 69
3772            +V   G  PE+   +L   +     F++  S ++ L R E F+  L G+  + N+I +
3773 Sbjct: 190 YVYKNGSEPEDCFWYLNALEAGVSYFSEVLSFKDVLRRSEQFQEILMGRNRKSNVIVMCG 249
3774
3775 Query: 70  KADTKFGVN---KFAD----LSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEE 122
3776              +T + V    K AD    +  D F N+Y       F DD    +Y+D+  + ++PPE+
3777 Sbjct: 250 TPETFYNVKGDLKVADDTVVILVDLFSNHY-------FEDDTRAPEYMDNVLVLTLPPEK 302
3778
3779
3780 >sp|P20736|BM86_BOOMI GLYCOPROTEIN ANTIGEN BM86 PRECURSOR (PROTECTIVE ANTIGEN)
3781           Length = 650
3782
3783  Score = 35.2 bits (79), Expect = 0.22
3784  Identities = 24/81 (29%), Positives = 36/81 (43%), Gaps = 5/81 (6%)
3785
3786 Query: 151 TTGNVEGQHFISQNKLVSLSEQNLVDC----DHECMEYEGEEACDEGCNGGLQPNAYNYI 206
3787            TT N +        KL  + + +  +C    DHEC     +++C E  NG  Q +    +
3788 Sbjct: 533 TTCNPKEIQECQDKKLECVYKNHKAECECPDDHECYREPAKDSCSEEDNGKCQSSGQRCV 592
3789
3790 Query: 207 IKNG-GIQTESSYPYTAETGT 226
3791            I+NG  +  E S   TA T T
3792 Sbjct: 593 IENGKAVCKEKSEATTAATTT 613
3793
3794
3795 >sp|P46992|YJR1_YEAST HYPOTHETICAL 43.0 KD PROTEIN IN CPS1-FPP1 INTERGENIC REGION
3796           Length = 396
3797
3798  Score = 32.0 bits (71), Expect = 1.9
3799  Identities = 39/191 (20%), Positives = 77/191 (39%), Gaps = 39/191 (20%)
3800
3801 Query: 77  VNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPPEE-------------- 122
3802            VNKF D++++E     + ++      + P+ADYL   F   +  ++
3803 Sbjct: 42  VNKFKDITNNESCTCEVGDRVWFSGKNAPLADYLSVHFRGPLKLKQFAFYTSPGFTVNNS 101
3804
3805 Query: 123 QTAFDW----------RTRGAVTPVKNQGQCGSCW-------SFSTTGNVEGQHFISQNK 165
3806            +++ DW          +T   VT + + G+   C        S + TG+      ++
3807 Sbjct: 102 RSSSDWNRLAYYESSSKTADNVTFLNHGGEASPCLGNALSYASSNGTGSASEATVLADGT 161
3808
3809 Query: 166 LVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETG 225
3810            L+S  ++ ++  +  C +   ++ C    +G   P  Y Y    GG  T   + +  E
3811 Sbjct: 162 LISSDQEYIIYSNVSCPKSGYDKGCGVYRSG--IPAYYGY----GG--TTKMFLFEFEMP 213
3812
3813 Query: 226 TQCNFNSANIG 236
3814            T+   NS++IG
3815 Sbjct: 214 TETEKNSSSIG 224
3816
3817
3818 >sp|P28493|PR5_ARATH PATHOGENESIS-RELATED PROTEIN 5 PRECURSOR (PR-5)
3819           Length = 239
3820
3821  Score = 32.0 bits (71), Expect = 1.9
3822  Identities = 24/93 (25%), Positives = 36/93 (37%), Gaps = 7/93 (7%)
3823
3824 Query: 137 VKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNG 196
3825            ++  G  G C      G V   +    + L  + + N+V C   C  +  ++ C  G N
3826 Sbjct: 137 IRPSGGSGDC---KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGAND 193
3827
3828 Query: 197 GLQ---PNAYNYIIKNGGIQTESSYPYTAETGT 226
3829              +   P  Y+ I KN       SY Y  ET T
3830 Sbjct: 194 KPETCPPTDYSRIFKN-ACPDAYSYAYDDETST 225
3831
3832
3833 >sp|P54634|POLN_LORDV NON-STRUCTURAL POLYPROTEIN [CONTAINS: RNA-DIRECTED RNA POLYMERASE ;
3834            THIOL PROTEASE 3C ; HELICASE (2C LIKE PROTEIN)]
3835           Length = 1699
3836
3837  Score = 31.3 bits (69), Expect = 3.2
3838  Identities = 13/31 (41%), Positives = 21/31 (66%)
3839
3840 Query: 17  SSRGIPPEEQSQFLEFQDKFNKKYSHEEYLE 47
3841            SS+G+  EE  ++   +++ N KYS EEYL+
3842 Sbjct: 893 SSKGLSDEEYDEYKRIREERNGKYSIEEYLQ 923
3843
3844
3845 >sp|Q02521|SPP2_YEAST SPLICEOSOME MATURATION PROTEIN SPP2
3846           Length = 185
3847
3848  Score = 30.9 bits (68), Expect = 4.2
3849  Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
3850
3851 Query: 30  LEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKF---GVNKF-ADLSS 85
3852            L+   K  KK   ++  ++  + K+NL   ++    +++HK  +K     ++KF  D  S
3853 Sbjct: 6   LKLGSKTLKKNISKKTKKKNSLQKANLFDWDDAETASLSHKPQSKIKIQSIDKFDLDEES 65
3854
3855 Query: 86  DEFKNYYLNNKEAIFT--DDLPVADYLDDEFINSIPPEE 122
3856               K   +   E   T  +D P+ +Y+ ++  N +P EE
3857 Sbjct: 66  SSKKKLVIKLSENADTKKNDAPLVEYVTEKEYNEVPVEE 104
3858
3859
3860 >sp|P41901|SPR3_YEAST SPORULATION-SPECIFIC SEPTIN
3861           Length = 512
3862
3863  Score = 30.9 bits (68), Expect = 4.2
3864  Identities = 17/58 (29%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
3865
3866 Query: 60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINS 117
3867            + +NLI +  K+D          L+ +E KN+    +E I   D+PV  +  DE +N+
3868 Sbjct: 237 KRVNLIPVIAKSDL---------LTKEELKNFKTQVREIIRVQDIPVCFFFGDEVLNA 285
3869
3870
3871 >sp|Q01532|BLH1_YEAST CYSTEINE PROTEINASE 1 (Y3) (BLEOMYCIN HYDROLASE) (BLM HYDROLASE)
3872           Length = 454
3873
3874  Score = 30.5 bits (67), Expect = 5.5
3875  Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
3876
3877 Query: 111 DDEFINS--IPPEEQTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVS 168
3878            DD  +N   +  ++   F+       TPV NQ   G CW F+ T         +Q +L
3879 Sbjct: 36  DDALLNKTRLQKQDNRVFNTVVSTDSTPVTNQKSSGRCWLFAAT---------NQLRLNV 86
3880
3881 Query: 169 LSEQNL 174
3882            LSE NL
3883 Sbjct: 87  LSELNL 92
3884
3885
3886 >sp|P24896|NU5M_CAEEL NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5
3887           Length = 527
3888
3889  Score = 30.5 bits (67), Expect = 5.5
3890  Identities = 21/52 (40%), Positives = 26/52 (49%), Gaps = 7/52 (13%)
3891
3892 Query: 44  EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNN 95
3893            +YL +  I+K    K  +L L  IN K  T F       LSS  FKNYYL +
3894 Sbjct: 466 DYLAKNSIYKMKNLKFMDLFLNNINSKGYTLF-------LSSGMFKNYYLKS 510
3895
3896
3897 >sp|P25648|SRB8_YEAST SUPPRESSOR OF RNA POLYMERASE B SRB8
3898           Length = 1427
3899
3900  Score = 30.1 bits (66), Expect = 7.2
3901  Identities = 22/89 (24%), Positives = 44/89 (48%), Gaps = 10/89 (11%)
3902
3903 Query: 21   IPPEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGV--- 77
3904             +PP + S F++     +  Y  EE  ++ E F  NLG    + ++ I H+ + K+ +
3905 Sbjct: 1314 LPPFQVSSFVKETKLHSGDYGEEEDADQEESFSLNLG----IGIVEIAHENEQKWLIYDK 1369
3906
3907 Query: 78   --NKFADLSSDEFKNYYLNNKEAIFTDDL 104
3908               +K+    S E   ++++N    +TDD+
3909 Sbjct: 1370 KDHKYVCTFSME-PYHFISNYNTKYTDDM 1397
3910
3911
3912 >sp|Q04723|PEPC_LACLC AMINOPEPTIDASE C
3913           Length = 436
3914
3915  Score = 30.1 bits (66), Expect = 7.2
3916  Identities = 11/20 (55%), Positives = 14/20 (70%)
3917
3918 Query: 311 NMPYWIVKNSWGADWGEQGY 330
3919            N   W V+NSWG D G++GY
3920 Sbjct: 370 NSTKWKVENSWGKDAGQKGY 389
3921
3922
3923 >sp|Q13867|BLMH_HUMAN BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH)
3924           Length = 455
3925
3926  Score = 29.7 bits (65), Expect = 9.4
3927  Identities = 10/17 (58%), Positives = 13/17 (75%)
3928
3929 Query: 315 WIVKNSWGADWGEQGYI 331
3930            W V+NSWG D G +GY+
3931 Sbjct: 392 WRVENSWGEDHGHKGYL 408
3932
3933
3934 >sp|P87362|BLMH_CHICK BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH) (AMINOPEPTIDASE H)
3935           Length = 455
3936
3937  Score = 29.7 bits (65), Expect = 9.4
3938  Identities = 10/19 (52%), Positives = 14/19 (73%)
3939
3940 Query: 315 WIVKNSWGADWGEQGYIYL 333
3941            W V+NSWG D G +GY+ +
3942 Sbjct: 392 WRVENSWGEDRGNKGYLIM 410
3943
3944
3945 >sp|P70645|BLMH_RAT BLEOMYCIN HYDROLASE (BLM HYDROLASE) (BMH)
3946           Length = 454
3947
3948  Score = 29.7 bits (65), Expect = 9.4
3949  Identities = 10/17 (58%), Positives = 13/17 (75%)
3950
3951 Query: 315 WIVKNSWGADWGEQGYI 331
3952            W V+NSWG D G +GY+
3953 Sbjct: 392 WRVENSWGEDHGHKGYL 408
3954
3955
3956   Database: /home/peter/blast/data/swissprot
3957     Posted date:  Oct 10, 2000 10:43 AM
3958   Number of letters in database: 31,984,247
3959   Number of sequences in database:  88,780
3960
3961 Lambda     K      H
3962    0.317    0.136    0.414
3963
3964 Lambda     K      H
3965    0.270   0.0477    0.230
3966
3967
3968 Matrix: BLOSUM62
3969 Gap Penalties: Existence: 11, Extension: 1
3970 Number of Hits to DB: 23348054
3971 Number of Sequences: 88780
3972 Number of extensions: 1039466
3973 Number of successful extensions: 3135
3974 Number of sequences better than 10.0: 162
3975 Number of HSP's better than 10.0 without gapping: 118
3976 Number of HSP's successfully gapped in prelim test: 8
3977 Number of HSP's that attempted gapping in prelim test: 2557
3978 Number of HSP's gapped (non-prelim): 148
3979 length of query: 351
3980 length of database: 31,984,247
3981 effective HSP length: 50
3982 effective length of query: 301
3983 effective length of database: 27,545,247
3984 effective search space: 8291119347
3985 effective search space used: 8291119347
3986 T: 11
3987 A: 40
3988 X1: 16 ( 7.3 bits)
3989 X2: 38 (14.8 bits)
3990 X3: 64 (24.9 bits)
3991 S1: 41 (21.6 bits)
3992 S2: 65 (29.7 bits)