Bio::DB::TFBS namespace has been moved to its own distribution named after itself
[bioperl-live.git] / t / data / AF032047.gbk
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1 LOCUS       ALSEB2MP1                291 bp    DNA     linear   PRI 30-JUN-1998
2 DEFINITION  Alouatta seniculus beta-2-microglobulin precursor, gene, exon 1.
3 ACCESSION   AF032047
4 VERSION     AF032047.1  GI:3264957
5 KEYWORDS    .
6 SEGMENT     1 of 2
7 SOURCE      Alouatta seniculus (howler monkey)
8   ORGANISM  Alouatta seniculus
9             Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
10             Mammalia; Eutheria; Primates; Platyrrhini; Cebidae; Alouattinae;
11             Alouatta.
12 REFERENCE   1  (bases 1 to 291)
13   AUTHORS   Canavez,F.C., Ladasky,J.J., Muniz,J.A., Seuanez,H.N., Parham,P. and
14             Cavanez,C.
15   TITLE     beta2-Microglobulin in neotropical primates (Platyrrhini)
16   JOURNAL   Immunogenetics 48 (2), 133-140 (1998)
17   MEDLINE   98298008
18    PUBMED   9634477
19 REFERENCE   2  (bases 1 to 291)
20   AUTHORS   Canavez,F.C., Ladasky,J.J., Seuanez,H.N. and Parham,P.
21   TITLE     Direct Submission
22   JOURNAL   Submitted (31-OCT-1997) Structural Biology, Stanford University,
23             Fairchild Building, Campus West Dr., Room #D-100, Stanford, CA
24             94305-5126, USA
25 FEATURES             Location/Qualifiers
26      source          1..291
27                      /organism="Alouatta seniculus"
28                      /mol_type="genomic DNA"
29                      /db_xref="taxon:9503"
30      mRNA            join(<136..202,AF032048.1:67..345,AF032048.1:1162..1189)
31                      /product="beta-2-microglobulin precursor"
32      sig_peptide     136..195
33      CDS             join(136..202,AF032048.1:67..345,AF032048.1:1162..1175)
34                      /codon_start=1
35                      /product="beta-2-microglobulin precursor"
36                      /protein_id="AAC52091.1"
37                      /db_xref="GI:3264961"
38                      /translation="MARFVVVALLALLSLSGLEAIQHAPKIQVYSRHPAENGKPNFLN
39                      CYVSGFHPSDIEVDLLKNGKKIEKVEHSDLSFSKDWSFYLLYYTEFTPNEKDEYACRV
40                      SHVTFPTPKTVKWDRTM"
41      sig_peptide     136..195
42      exon            <136..202
43                      /number=1
44      intron          203..>291
45                      /number=1
46 BASE COUNT       31 a    103 c     78 g     79 t
47 ORIGIN      
48         1 cggtccccgc gggccttctc ctgattggct gtccccgcgg gccttgtcct tattggctgt
49        61 gcccgactcc gtataacata aatagaggcg tcgagttgcg cgggcattac tgcagcggac
50       121 cgcacttggg tcgagatggc tcgcttcgtg gtggtagccc tgctcgcgct actctctctg
51       181 tctggcctgg aggctatcca gcgtaagtct ctcctcccgt ccggcgctgg tcctttccct
52       241 cccgccccaa ctctctgtag ccctctctgt gctctctcgt tccgttacct g