| blob | 2181ec10057e0d5a713c2170a29becf26c8814df |
1 BLASTX 2.0MP-WashU [04-May-2006] [linux26-x64-I32LPF64 2006-05-10T17:22:28]\r
2 \r
3 Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.\r
4 All Rights Reserved.\r
5 \r
6 Reference: Gish, W. (1996-2006) http://blast.wustl.edu\r
7 Gish, Warren and David J. States (1993). Identification of protein coding\r
8 regions by database similarity search. Nat. Genet. 3:266-72.\r
9 \r
10 Query= MySampleSeq\r
11 (14,601 letters)\r
12 \r
13 Translating both strands of query sequence in all 6 reading frames\r
14 \r
15 Database: UNIPROT_B9GCX0\r
16 1 sequences; 3829 total letters.\r
17 Searching done\r
18 \r
19 Smallest\r
20 Sum\r
21 High Probability\r
22 Sequences producing High-scoring Segment Pairs: Score P(N) N\r
23 \r
24 UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative unch... 7596 0. 11\r
25 \r
26 \r
27 >UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative uncharacterized protein;\r
28 |Oryza sativa subsp japonica (Rice) |AA|3829\r
29 Length = 3829\r
30 \r
31 Minus Strand HSPs:\r
32 \r
33 Score = 7596 (2679.0 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
34 Identities = 1533/2058 (74%), Positives = 1675/2058 (81%), Frame = -2\r
35 \r
36 Query: 10205 PGQTSDKGKSSNLCVIHIPDMHLQKEDDLSILKQCVDKFNVPPEHRFALLTRIRYARAFN 10026\r
37 P Q+SDK K SNLCVIHIPD+HLQKEDDLSILKQCVDKFNVP EHRF+L TRIRYA AFN\r
38 Sbjct: 435 PDQSSDKAKPSNLCVIHIPDLHLQKEDDLSILKQCVDKFNVPSEHRFSLFTRIRYAHAFN 494\r
39 \r
40 Query: 10025 SARTCRIYSRISLLSFIVLVQSSDAHDELTYFFTNEPEYINELIRLVRSEDSVPGSIRXX 9846\r
41 S RTCR+YSRISLL+FIVLVQSSDAHDELT FFTNEPEYINELIRLVRSE+ VPG IR \r
42 Sbjct: 495 SPRTCRLYSRISLLAFIVLVQSSDAHDELTSFFTNEPEYINELIRLVRSEEFVPGPIRAL 554\r
43 \r
44 Query: 9845 XXXXXXXXXXXXXSSHERARXXXXXXXXXXXXNRMVLLSVLQKAISSLNSLNDTSSPLIV 9666\r
45 SSHERAR NRMVLLSVLQKAISSL+S NDTSSPLIV\r
46 Sbjct: 555 AMLALGAQLAAYASSHERARILSGSSIISAGGNRMVLLSVLQKAISSLSSPNDTSSPLIV 614\r
47 \r
48 Query: 9665 DAXXXXXXXXXXXXXXXGTTVRGSGMVXXXXXXXRDNDPSHMHLVCLAVKTLQKLMEYSS 9486\r
49 DA GTTVRGSGMV +DNDPSHMHLVCLAVKTLQKLMEYSS\r
50 Sbjct: 615 DALLQFFLLHVLSSSSSGTTVRGSGMVPPLLPLLQDNDPSHMHLVCLAVKTLQKLMEYSS 674\r
51 \r
52 Query: 9485 PAVSLFKDLGGVELLSQRLHVEVQRVIGTADGHNSMVT-DAVKSDDNHMYSQKRLIKALL 9309\r
53 PAVSLFKDLGGVELLSQRLHVEVQRVIG D HNSMVT DA+KS+++H+YSQKRLIKALL\r
54 Sbjct: 675 PAVSLFKDLGGVELLSQRLHVEVQRVIGV-DSHNSMVTSDALKSEEDHLYSQKRLIKALL 733\r
55 \r
56 Query: 9308 KALGSATYSPGNPARSQSSQDNSLPVSLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 9129\r
57 KALGSATYSP NPARSQSS DNSLP+SLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC\r
58 Sbjct: 734 KALGSATYSPANPARSQSSNDNSLPISLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 793\r
59 \r
60 Query: 9128 FITLKELGVPDAFISSVTAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 8949\r
61 F +LKELG+PDAF+SSV+AGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT\r
62 Sbjct: 794 FPSLKELGLPDAFLSSVSAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 853\r
63 \r
64 Query: 8948 FTSRKYLIPMNEGXXXXXXXXXXXXRHVQSLRSIGVDIIIEIINKLSSSQEYKNNE-TAT 8772\r
65 FTSRKYLIPMNEG RHVQSLRS GVDIIIEIINKLSS +E K+NE A+\r
66 Sbjct: 854 FTSRKYLIPMNEGVVLLANAVEELLRHVQSLRSTGVDIIIEIINKLSSPREDKSNEPAAS 913\r
67 \r
68 Query: 8771 LQEKTDMETDVEGRDLVSAMDSSVDGSNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 8592\r
69 E+T+METD EGRDLVSAMDSS DG+NDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK\r
70 Sbjct: 914 SDERTEMETDAEGRDLVSAMDSSEDGTNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 973\r
71 \r
72 Query: 8591 GGXXXXXXXXXRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKSALK 8412\r
73 GG RPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLK+AL+\r
74 Sbjct: 974 GGLQALLTLLLRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKNALQ 1033\r
75 \r
76 Query: 8411 ELDKVSNSFDMTKIEKGAIPSXXXXXXXXXXAASKDNRWMNALLSEFGDASREVLEDVGQ 8232\r
77 ELD V++S ++ K+EKGAIPS AASKDNRWMNALLSEFGD+SR+VLED+G+\r
78 Sbjct: 1034 ELDTVASSGEVAKLEKGAIPSLFVVEFLLFLAASKDNRWMNALLSEFGDSSRDVLEDIGR 1093\r
79 \r
80 Query: 8231 VHREVLWKISLFEKNKIVXXXXXXXXXXXXXXPDMSASDIGDSRYTSFRQYLDPILRRRG 8052\r
81 VHREVLW+ISLFE+ K+ D + D+ DSRYTSFRQYLDP+LRRRG\r
82 Sbjct: 1094 VHREVLWQISLFEEKKV--EPETSSPLANDSQQDAAVGDVDDSRYTSFRQYLDPLLRRRG 1151\r
83 \r
84 Query: 8051 SGWNIESQVSDLINMYRDIGRAASDSQRVGSDRYSSLGLPXXXXXXXX-XXXXXXXXTRX 7875\r
85 SGWNIESQVSDLIN+YRDIGRAA DSQR Y S GLP T+ \r
86 Sbjct: 1152 SGWNIESQVSDLINIYRDIGRAAGDSQR-----YPSAGLPSSSSQDQPPSSSDASASTKS 1206\r
87 \r
88 Query: 7874 XXXXXXXXXXXCFDMMRSLSYHINHLFLELGKAMLFASRRENSPVNLSPAVISVANNIAS 7695\r
89 C DMMRSLSYHINHLF+ELGKAML SRRENSPVNLS +++SVA+NIAS\r
90 Sbjct: 1207 EEDKKRSEHSSCCDMMRSLSYHINHLFMELGKAMLLTSRRENSPVNLSASIVSVASNIAS 1266\r
91 \r
92 Query: 7694 IVLEHLNFEGHSVSFERDMTVTTKCRYLGKVVEFVDGMLLDRPESCNSIMVNSFYCRGVI 7515\r
93 IVLEHLNFEGH++S ER+ TV+TKCRYLGKVVEF+DG+LLDRPESCN IM+NSFYCRGVI\r
94 Sbjct: 1267 IVLEHLNFEGHTISSERETTVSTKCRYLGKVVEFIDGILLDRPESCNPIMLNSFYCRGVI 1326\r
95 \r
96 Query: 7514 QAILTTFQATSELLFTMSRPPSSPMETDSKTGKDGKEMDSSWIYGPLTSYGAIMDHLVTS 7335\r
97 QAILTTF+ATSELLF+M+R PSSPMETDSK+ K+ +E DSSWIYGPL+SYGAI+DHLVTS\r
98 Sbjct: 1327 QAILTTFEATSELLFSMNRLPSSPMETDSKSVKEDRETDSSWIYGPLSSYGAILDHLVTS 1386\r
99 \r
100 Query: 7334 SFILSSSTRQLLEQPIFNGSVRFPQDAETFMKLLQSKVLKTVLPIWAHPQFPECNIELIS 7155\r
101 SFILSSSTRQLLEQPIF+G++RFPQDAE FMKLLQS+VLKTVLPIW HPQFPECN+ELIS\r
102 Sbjct: 1387 SFILSSSTRQLLEQPIFSGNIRFPQDAEKFMKLLQSRVLKTVLPIWTHPQFPECNVELIS 1446\r
103 \r
104 Query: 7154 SVMSIMRHVCSGVEVKDTVGNGGARLAGPPPDESAISLIVEMGFSRARAEEALRQVGTNS 6975\r
105 SV SIMRHV SGVEVK+T N GARLAGPPPDE+AISLIVEMGFSRARAEEALRQVGTNS\r
106 Sbjct: 1447 SVTSIMRHVYSGVEVKNTAINTGARLAGPPPDENAISLIVEMGFSRARAEEALRQVGTNS 1506\r
107 \r
108 Query: 6974 VEIATDWLFAHPEEPQEEDDELARALAMSLGNSVTPAQEGDSRSNDLELEEATVQPPPID 6795\r
109 VEIATDWLF+HPEEPQE DDELARALAMSLGNS T AQE D +SNDLELEE TVQ PPID\r
110 Sbjct: 1507 VEIATDWLFSHPEEPQE-DDELARALAMSLGNSDTSAQEEDGKSNDLELEEETVQLPPID 1565\r
111 \r
112 Query: 6794 EMLRSCLQLLQRKEALAFSVRDMLVTISSQNDGQNRVKVLTYLIDNLKQCVVASEPSNDT 6615\r
113 E+L SCL+LLQ KE+LAF VRDML+T+SSQNDGQNRVKVLTYLID+LK C+++S+P T\r
114 Sbjct: 1566 EVLSSCLRLLQTKESLAFPVRDMLLTMSSQNDGQNRVKVLTYLIDHLKNCLMSSDPLKST 1625\r
115 \r
116 Query: 6614 XXXXXXXXXXXXXHGDTAAREVASKAGLVKVALDLLCSWEVQIRESSMIEVPNWVISCFL 6435\r
117 HGDTAAREVASKAGLVKVAL+LLCSWE++ R+ + +VPNWV SCFL\r
118 Sbjct: 1626 ALSALFHVLALILHGDTAAREVASKAGLVKVALNLLCSWELEPRQGEISDVPNWVPSCFL 1685\r
119 \r
120 Query: 6434 SVDQMLQLEPKLPDVTELHVLKRDNSNIKTSLVIDDSKRKDSESLPNVGLLDMEDQFQLL 6255\r
121 S+D+MLQL+PKLPDVTEL VLK+DNSN +TS+VIDDSK+KDSE+ + GLLD+EDQ QLL\r
122 Sbjct: 1686 SIDRMLQLDPKLPDVTELDVLKKDNSNTQTSVVIDDSKKKDSEASSSTGLLDLEDQKQLL 1745\r
123 \r
124 Query: 6254 KICCKCIGKQLPSASMHAILQLSATLTKVHAAAICFLESGGLNALLSLPTSSLFSGFNNM 6075\r
125 KICCKCI KQLPSA+MHAILQL ATLTK+HAAAICFLESGGL+ALLSLPTSSLFSGFN++\r
126 Sbjct: 1746 KICCKCIQKQLPSATMHAILQLCATLTKLHAAAICFLESGGLHALLSLPTSSLFSGFNSV 1805\r
127 \r
128 Query: 6074 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFIQNLAFVVYRDPVIFM 5895\r
129 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNF+QNLAFVVYRDPVIFM\r
130 Sbjct: 1806 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFVQNLAFVVYRDPVIFM 1865\r
131 \r
132 Query: 5894 KAAQSVCQIEMVGDRPYVVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDTAAGSP 5715\r
133 KAAQ+VCQIEMVGDRPYVVLL SGD A GSP\r
134 Sbjct: 1866 KAAQAVCQIEMVGDRPYVVLLKDREKEKNKEKEKDKPADKDKTSGAATKMTSGDMALGSP 1925\r
135 \r
136 Query: 5714 ANSHGKQSDLNSRNVKSHRKPPQSFVTVIEHLLDLLMSFVPPPRPEDQVD-VSGTALSSD 5538\r
137 +S GKQ+DLN+RNVKS+RKPPQSFVTVIE+LLDL+MSF+PPPR ED+ D S TA S+D\r
138 Sbjct: 1926 ESSQGKQTDLNTRNVKSNRKPPQSFVTVIEYLLDLVMSFIPPPRAEDRPDGESSTASSTD 1985\r
139 \r
140 Query: 5537 MDIDCSSAKGKGKAVSVPPEESKHAIQESTASLAKTAFFLKLLTDVLLTYASSIHVVLRH 5358\r
141 MDID SSAKGKGKAV+V PEESKHAIQE+TASLAK+AF LKLLTDVLLTYASSI VVLRH\r
142 Sbjct: 1986 MDID-SSAKGKGKAVAVTPEESKHAIQEATASLAKSAFVLKLLTDVLLTYASSIQVVLRH 2044\r
143 \r
144 Query: 5357 DAELSNMHGPNRTSARLTSGGIFNHILQHFLPHATRQKKERKNDGDWMYKLATRANQFLV 5178\r
145 DA+LSN GPNR ++SGG+F+HILQHFLPH+T+QKKERK DGDW YKLATRANQFLV\r
146 Sbjct: 2045 DADLSNARGPNRIG--ISSGGVFSHILQHFLPHSTKQKKERKADGDWRYKLATRANQFLV 2102\r
147 \r
148 Query: 5177 ASSIRSAEARKRIFSEICSIFLDFTDSSAGYNAPVPRMNVYVDLLNDILSARSPTGSSLS 4998\r
149 ASSIRSAE RKRIFSEICSIF+DFTDS AG P+ RMN YVDLLNDILSARSPTGSSLS\r
150 Sbjct: 2103 ASSIRSAEGRKRIFSEICSIFVDFTDSPAGCKPPILRMNAYVDLLNDILSARSPTGSSLS 2162\r
151 \r
152 Query: 4997 AESAVIFVEAGLVHSLSTMLQVLDLDHPDSAKIVTAVVKALELVSKEHIHSAD-NAKGVN 4821\r
153 AESAV FVE GLV LS LQV+DLDHPDSAKIVTA+VKALE+V+KEH+HSAD NAKG N\r
154 Sbjct: 2163 AESAVTFVEVGLVQYLSKTLQVIDLDHPDSAKIVTAIVKALEVVTKEHVHSADLNAKGEN 2222\r
155 \r
156 Query: 4820 SSKIAXXXXXXXXXXXRFQALDMTSQPTEMVTDHRETFNAVRTSQISDSVADEMDHDRDM 4641\r
157 SSK+ RFQALD T+QPTEMVTDHRE FNAV+TSQ SDSVADEMDHDRD+\r
158 Sbjct: 2223 SSKVVSDQSNLDPSSNRFQALD-TTQPTEMVTDHREAFNAVQTSQSSDSVADEMDHDRDL 2281\r
159 \r
160 Query: 4640 DGGFARDGEDDFMHEMAEDGTGDGSTMEIRIEIPRNREDDMAPAADDTXXXXXXXXXXXX 4461\r
161 DGGFARDGEDDFMHE+AEDGT + STMEIR EIPRNREDDMA +D+ \r
162 Sbjct: 2282 DGGFARDGEDDFMHEIAEDGTPNESTMEIRFEIPRNREDDMADDDEDSDEDMSADDGEEV 2341\r
163 \r
164 Query: 4460 XXXXXXXXXXXXXX-----AHRMSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVIL 4299\r
165 AH+MSHP GVIL\r
166 Sbjct: 2342 DEDEDEDEDEENNNLEEDDAHQMSHPDTDQEDREMDEEEFDEDLLEEDDDEDEDEEGVIL 2401\r
167 \r
168 Query: 4298 RLEEGINGINVLDHVEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRASDHGV 4119\r
169 RLEEGINGINV DH+EVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRA DHGV\r
170 Sbjct: 2402 RLEEGINGINVFDHIEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRAGDHGV 2461\r
171 \r
172 Query: 4118 LDHPLLEEPSSTTNFSDQ 4065\r
173 DHPLLEEPSS + Q\r
174 Sbjct: 2462 FDHPLLEEPSSVLHLPQQ 2479\r
175 \r
176 Score = 1665 (591.2 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
177 Identities = 326/371 (87%), Positives = 342/371 (92%), Frame = -1\r
178 \r
179 Query: 1119 LSDSAYLLVGEVLKKIVALAPFFCCHFINELARSMQNLTLRAMKELHLYENSEKALLSSS 940\r
180 LSD+AYLLV EVLKKIVALAPFFCCHFINELA SMQNLTL AMKELHLYE+SEKALLS+S\r
181 Sbjct: 3194 LSDNAYLLVAEVLKKIVALAPFFCCHFINELAHSMQNLTLCAMKELHLYEDSEKALLSTS 3253\r
182 \r
183 Query: 939 SANGTAVLRVVQALSSLVNTLQERKDPEQPAEKDHSDAVSQISEINTALDSLWLELSNCI 760\r
184 SANGTA+LRVVQALSSLV TLQE+KDP+ PAEKDHSDA+SQISEINTALD+LWLELSNCI\r
185 Sbjct: 3254 SANGTAILRVVQALSSLVTTLQEKKDPDHPAEKDHSDALSQISEINTALDALWLELSNCI 3313\r
186 \r
187 Query: 759 SKIESSSEYXXXXXXXXXXXXMLTTGVAPPLPAGTQNLLPYIESFFVTCEKLRPGQPDAV 580\r
188 SKIESSSEY LTTGVAPPLPAGTQN+LPYIESFFVTCEKLRPGQPDA+\r
189 Sbjct: 3314 SKIESSSEYASNLSPASANAATLTTGVAPPLPAGTQNILPYIESFFVTCEKLRPGQPDAI 3373\r
190 \r
191 Query: 579 QDASTSDMEDASTSSGGQRSSACQASLDEKQNAFVKFSEKHRRLLNAFIRQNSGLLEKSF 400\r
192 Q+ASTSDMEDASTSSGGQ+SS A+LDEK NAFVKFSEKHRRLLNAFIRQN GLLEKSF\r
193 Sbjct: 3374 QEASTSDMEDASTSSGGQKSSGSHANLDEKHNAFVKFSEKHRRLLNAFIRQNPGLLEKSF 3433\r
194 \r
195 Query: 399 SLMLKIPRLIDFDNKRAYFRSKIKHQYDHHHHSPVRISVRRPYILEDSYNQLRMRSPQDL 220\r
196 SLMLKIPRLI+FDNKRAYFRSKIKHQ+DHHH SPVRISVRR YILEDSYNQLRMRSPQDL\r
197 Sbjct: 3434 SLMLKIPRLIEFDNKRAYFRSKIKHQHDHHH-SPVRISVRRAYILEDSYNQLRMRSPQDL 3492\r
198 \r
199 Query: 219 KGRLTVQFQGEEGIDAGGLTREWYQSISRVIVDKSALLFTTVGNDLTFQPNPNSVYQTEH 40\r
200 KGRLTV FQGEEGIDAGGLTREWYQ +SRVI DK ALLFTTVGNDLTFQPNPNSVYQTEH\r
201 Sbjct: 3493 KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDLTFQPNPNSVYQTEH 3552\r
202 \r
203 Query: 39 LSYFKFVGRVV 7\r
204 LSYFKFVGRVV\r
205 Sbjct: 3553 LSYFKFVGRVV 3563\r
206 \r
207 Score = 1356 (482.4 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
208 Identities = 284/370 (76%), Positives = 307/370 (82%), Frame = -1\r
209 \r
210 Query: 3882 ENLVEMAFSDRNHESSSSRLDAIFRSLRSGRNGHRFNMWLDDGPQRNGSAAPAVPEGIEE 3703\r
211 ENLVEMAFSDRNH++SSSRLDAIFRSLRSGR+GHRFNMWLDD PQR GSAAPAVPEGIEE\r
212 Sbjct: 2483 ENLVEMAFSDRNHDNSSSRLDAIFRSLRSGRSGHRFNMWLDDSPQRTGSAAPAVPEGIEE 2542\r
213 \r
214 Query: 3702 LLISHLRRPTP-QPDGQRTPVGGAQENDQPN----HGSDAEAREVAPAQQNENSESTLNP 3538\r
215 LL+S LRRPTP QPD Q TP GGA+ENDQ N H S+ EA AP +QNEN+++ + P\r
216 Sbjct: 2543 LLVSQLRRPTPEQPDEQSTPAGGAEENDQSNQQHLHQSETEAGGDAPTEQNENNDNAVTP 2602\r
217 \r
218 Query: 3537 -----LDLSECAGPAPPDSDALQRDVSNASELATEMQYERSDAITRDVEAVSQASSGSGA 3373\r
219 LD SE A PAPP S+ALQR+VS ASE ATEMQYERSDA+ RDVEAVSQASSGSGA\r
220 Sbjct: 2603 AARSELDGSESADPAPP-SNALQREVSGASEHATEMQYERSDAVVRDVEAVSQASSGSGA 2661\r
221 \r
222 Query: 3372 TLGESLRSLEVEIGSVEGHDDGDRHGTSGTSERLPLGDIQAAARSRRPSGNAVPVSSRDM 3193\r
223 TLGESLRSLEVEIGSVEGHDDGDRHG S +RLPLGD+QAA+RSRRP G+ V SSRD+\r
224 Sbjct: 2662 TLGESLRSLEVEIGSVEGHDDGDRHGAS---DRLPLGDLQAASRSRRPPGSVVLGSSRDI 2718\r
225 \r
226 Query: 3192 SLESVSEVPQNPDQEPDQNASEGNQEPTRAAGADSIDPTFLEALPEDLRAEVLSSRQNQV 3013\r
227 SLESVSEVPQN +QE DQNA EG+QEP RAA DSIDPTFLEALPEDLRAEVLSSRQNQV\r
228 Sbjct: 2719 SLESVSEVPQNQNQESDQNADEGDQEPNRAADTDSIDPTFLEALPEDLRAEVLSSRQNQV 2778\r
229 \r
230 Query: 3012 TQTSNDQPQDDGDIDPEFLAALPPDIREEVLAXXXXXXXXXXXXXXXXXPVEMDAVSIIA 2833\r
231 TQTSN+QPQ+DGDIDPEFLAALPPDIREEVLA PVEMDAVSIIA\r
232 Sbjct: 2779 TQTSNEQPQNDGDIDPEFLAALPPDIREEVLAQQRAQRLQQSQELEGQ-PVEMDAVSIIA 2837\r
233 \r
234 Query: 2832 TFPSEIREEV 2803\r
235 TFPSEIREEV\r
236 Sbjct: 2838 TFPSEIREEV 2847\r
237 \r
238 Score = 323 (118.8 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
239 Identities = 61/72 (84%), Positives = 67/72 (93%), Frame = -2\r
240 \r
241 Query: 2351 LQPLYKGQLQKLLVNLCTHRGSRQALVQILVDMLMLDLQGFSKKSIDAPEPPFRLYGCHA 2172\r
242 +QPLYKGQLQ+LL+NLC HR SR++LVQILVDMLMLDLQG SKKSIDA EPPFRLYGCHA\r
243 Sbjct: 2945 VQPLYKGQLQRLLLNLCAHRESRKSLVQILVDMLMLDLQGSSKKSIDATEPPFRLYGCHA 3004\r
244 \r
245 Query: 2171 NIAYSRPQSSDG 2136\r
246 NI YSRPQS+DG\r
247 Sbjct: 3005 NITYSRPQSTDG 3016\r
248 \r
249 Score = 314 (115.6 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
250 Identities = 55/70 (78%), Positives = 64/70 (91%), Frame = -2\r
251 \r
252 Query: 10865 WKQGNFHHWRPLFIHFDTYFKTYISSRKDLLLSDDMTEADPMPKNAILKILRVMQIILEN 10686\r
253 + +GNFHHW+PLF+HFDTYFKT ISSRKDLLLSDDM E DP+PKN IL+ILRVMQI+LEN\r
254 Sbjct: 303 FNKGNFHHWKPLFMHFDTYFKTQISSRKDLLLSDDMAEGDPLPKNTILQILRVMQIVLEN 362\r
255 \r
256 Query: 10685 CQNRSSFTGL 10656\r
257 CQN++SF GL\r
258 Sbjct: 363 CQNKTSFAGL 372\r
259 \r
260 Score = 310 (114.2 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
261 Identities = 64/93 (68%), Positives = 74/93 (79%), Frame = -1\r
262 \r
263 Query: 1698 QLLNLLDVVMHNAENEIKQAKLEASSEKPSAPDNAVQDGKNNSDISVSYGSELNPEDGSK 1519\r
264 QLLNLL+VVM NAENEI QAKLEA+SEKPS P+NA QD + ++ + S GS+ N ED SK\r
265 Sbjct: 3101 QLLNLLEVVMLNAENEITQAKLEAASEKPSGPENATQDAQEGANAAGSSGSKSNAEDSSK 3160\r
266 \r
267 Query: 1518 APAVDNRSNLQAVLRSLPQPELRLLCSLLAHDG 1420\r
268 P VD S+LQ VL+SLPQ ELRLLCSLLAHDG\r
269 Sbjct: 3161 LPPVDGESSLQKVLQSLPQAELRLLCSLLAHDG 3193\r
270 \r
271 Score = 274 (101.5 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
272 Identities = 55/87 (63%), Positives = 61/87 (70%), Frame = -2\r
273 \r
274 Query: 2030 GLPPLVSRRVLETLTNLARSHPNVAKLLLFLEFPCPSRCFPEAHDHRHGKAVLLDDGEEQ 1851\r
275 G+PPLVSRRVLETLT LAR+HPNVAKLLLFLEFPCP C E D R GKAVL++ EQ\r
276 Sbjct: 3016 GVPPLVSRRVLETLTYLARNHPNVAKLLLFLEFPCPPTCHAETSDQRRGKAVLMEGDSEQ 3075\r
277 \r
278 Query: 1850 KTFAXXXXXXXXXXXXYMRSVAHLEQV 1770\r
279 +A YMRSVAHLEQ+\r
280 Sbjct: 3076 NAYALVLLLTLLNQPLYMRSVAHLEQL 3102\r
281 \r
282 Score = 231 (86.4 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
283 Identities = 46/71 (64%), Positives = 50/71 (70%), Frame = -2\r
284 \r
285 Query: 10571 CVNSLPFL-CQHLKLLLASSDPEIXXXXXXXXXXXXKINPSKLHMNGKLISCGPINTHLL 10395\r
286 C N F +H +LLLASSDPEI KINPSKLHMNGKLI+CG IN+HLL\r
287 Sbjct: 363 CQNKTSFAGLEHFRLLLASSDPEIVVAALETLAALVKINPSKLHMNGKLINCGAINSHLL 422\r
288 \r
289 Query: 10394 SLAQGWGSKEE 10362\r
290 SLAQGWGSKEE\r
291 Sbjct: 423 SLAQGWGSKEE 433\r
292 \r
293 Score = 217 (81.4 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
294 Identities = 46/70 (65%), Positives = 50/70 (71%), Frame = -3\r
295 \r
296 Query: 2665 NMLRERFAHRYHSSSLFGMXXXXXXXXXXXX-DIMAAGLDRNTGDPSRS-TSKPIETEGA 2492\r
297 NMLRERFAHRYHS SLFGM DI+ +GLDRN GD SR TSKPIETEG+\r
298 Sbjct: 2868 NMLRERFAHRYHSGSLFGMNSRGRRGESSRRGDIIGSGLDRNAGDSSRQPTSKPIETEGS 2927\r
299 \r
300 Query: 2491 PLVDEDGLKA 2462\r
301 PLVD+D LKA\r
302 Sbjct: 2928 PLVDKDALKA 2937\r
303 \r
304 Score = 159 (61.0 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
305 Identities = 29/35 (82%), Positives = 32/35 (91%), Frame = -1\r
306 \r
307 Query: 11037 PANIKAFIDRVVNIPLHDIAIPLSGFCWEFNKVNF 10933\r
308 PA +KAFIDRV++IPLHDIAIPLSGF WEFNK NF\r
309 Sbjct: 274 PAKVKAFIDRVISIPLHDIAIPLSGFRWEFNKGNF 308\r
310 \r
311 Score = 125 (49.1 bits), Expect = 0., Sum P(11) = 0., Group = 1\r
312 Identities = 27/41 (65%), Positives = 30/41 (73%), Frame = -3\r
313 \r
314 Query: 14599 GFRSEXXXXXXXXXXHRASFPLRLQQILAGSRAVSPAIKIE 14477\r
315 G RSE HRASFPLRLQQIL+GSRAVSP+IK+E\r
316 Sbjct: 231 GSRSEMAAAAAMAA-HRASFPLRLQQILSGSRAVSPSIKVE 270\r
317 \r
318 \r
319 Parameters:\r
320 B=1000000\r
321 V=1000000\r
322 W=5\r
323 S2=65\r
324 X=10\r
325 cpus=8\r
326 filter=seg\r
327 hspsepqmax=10000\r
328 hspmax=0\r
329 topcomboN=1\r
330 \r
331 ctxfactor=5.77\r
332 E=10\r
333 \r
334 Query ----- As Used ----- ----- Computed ----\r
335 Frame MatID Matrix name Lambda K H Lambda K H\r
336 +3 0 BLOSUM62 0.318 0.134 0.401 0.350 0.152 0.535 \r
337 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
338 +2 0 BLOSUM62 0.318 0.134 0.401 0.346 0.150 0.530 \r
339 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
340 +1 0 BLOSUM62 0.318 0.134 0.401 0.345 0.148 0.496 \r
341 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
342 -1 0 BLOSUM62 0.318 0.134 0.401 0.351 0.155 0.580 \r
343 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
344 -2 0 BLOSUM62 0.318 0.134 0.401 0.337 0.145 0.465 \r
345 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
346 -3 0 BLOSUM62 0.318 0.134 0.401 0.358 0.157 0.604 \r
347 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a\r
348 \r
349 Query\r
350 Frame MatID Length Eff.Length E S W T X E2 S2\r
351 +3 0 4866 4532 8.3 48 5 n/a 10 0.0044 48\r
352 44 0.21 40\r
353 +2 0 4866 4399 8.0 48 5 n/a 10 0.0044 48\r
354 44 0.21 40\r
355 +1 0 4867 4373 8.0 48 5 n/a 10 0.0044 48\r
356 44 0.21 40\r
357 -1 0 4867 4371 8.0 48 5 n/a 10 0.0044 48\r
358 44 0.21 40\r
359 -2 0 4866 4254 9.9 47 5 n/a 10 0.0061 47\r
360 44 0.21 40\r
361 -3 0 4866 4240 9.9 47 5 n/a 10 0.0061 47\r
362 44 0.21 40\r
363 \r
364 \r
365 Statistics:\r
366 \r
367 Database: UNIPROT_B9GCX0\r
368 Title: UNIPROT_B9GCX0\r
369 Posted: 3:30:56 PM CET Oct 29, 2009\r
370 Created: 3:30:56 PM CET Oct 29, 2009\r
371 Format: XDF-1\r
372 # of letters in database: 3829\r
373 # of sequences in database: 1\r
374 # of database sequences satisfying E: 1\r
375 No. of states in DFA: 32,067 (6765 KB)\r
376 Total size of DFA: 7905 KB (8709 KB)\r
377 Time to generate neighborhood: 0.03u 0.01s 0.04t Elapsed: 00:00:00\r
378 No. of threads or processors used: 1\r
379 Search cpu time: 0.00u 0.01s 0.01t Elapsed: 00:00:00\r
380 Total cpu time: 0.03u 0.03s 0.06t Elapsed: 00:00:00\r
381 Start: Fri Oct 30 09:12:00 2009 End: Fri Oct 30 09:12:00 2009