Bio::DB::TFBS namespace has been moved to its own distribution named after itself
[bioperl-live.git] / t / data / hmmsearch3.out
blob20589e4677c069af810de0224a6c5a5d27689727
1 # hmmsearch :: search profile(s) against a sequence database
2 # HMMER 3.0 (March 2010); http://hmmer.org/
3 # Copyright (C) 2010 Howard Hughes Medical Institute.
4 # Freely distributed under the GNU General Public License (GPLv3).
5 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
6 # query HMM file:                  Kv9.hmm
7 # target sequence database:        /home/pboutet/Desktop/databases/nr_May26
8 # max ASCII text line length:      unlimited
9 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
11 Query:       Kv9  [M=481]
12 Scores for complete sequences (score includes all domains):
13    --- full sequence ---   --- best 1 domain ---    -#dom-
14     E-value  score  bias    E-value  score  bias    exp  N  Sequence                              Description
15     ------- ------ -----    ------- ------ -----   ---- --  --------                              -----------
16    1.1e-260  874.4   2.2   1.2e-260  874.3   1.5    1.0  1  gi|281344220|gb|EFB19804.1|           hypothetical protein PANDA_002980 [Ailuropoda melanoleuca]
17    2.2e-259  870.1   2.8   2.5e-259  869.9   1.9    1.0  1  gi|296224438|ref|XP_002758060.1|      PREDICTED: potassium voltage-gated channel subfamily S member 3 [Callithrix jacchus]