t/data/multi_blast.bls

   1 BLASTP 2.1.3 [Apr-11-2001]
   2
   3
   4 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
   5 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
   6 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
   7 programs",  Nucleic Acids Res. 25:3389-3402.
   8
   9 Query= CATH_RAT
  10          (333 letters)
  11
  12 Database: /data_2/jason/blastdb/wormpep62
  13            20,085 sequences; 8,813,425 total letters
  14
  15 Searching..................................................done
  16
  17                                                                    Score     E
  18 Sequences producing significant alignments:                        (bits)  Value
  19
  20 T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O4573...   196  2e-50
  21 F41E6.6 CE10254   cysteine protease and a protease inhibitor...   166  2e-41
  22 R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id...   162  3e-40
  23 R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810 pr...   126  2e-29
  24 Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4 pr...   123  1e-28
  25
  26 >T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O45734
  27            protein_id:CAB07275.1
  28           Length = 337
  29
  30  Score =  196 bits (498), Expect = 2e-50
  31  Identities = 122/318 (38%), Positives = 174/318 (54%), Gaps = 21/318 (6%)
  32
  33 Query: 26  NAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH-----TFKMGLNQF 80
  34            +AIEK+    + +   K YS  E    ++ F  N   I+ HN R+H     TF+MGLN
  35 Sbjct: 27  SAIEKWD--DYKEDFDKEYSESEEQTYMEAFVKNMIHIENHN-RDHRLGRKTFEMGLNHI 83
  36
  37 Query: 81  SDMSFAEIK----HKYLWSEPQNCSATKSNYLRGTG-PYPSSMDWRKKGNVVSPVKNQGA 135
  38            +D+ F++ +    ++ L+ + +      S++L       P  +DWR   ++V+ VKNQG
  39 Sbjct: 84  ADLPFSQYRKLNGYRRLFGDSR--IKNSSSFLAPFNVQVPDEVDWRDT-HLVTDVKNQGM 140
  40
  41 Query: 136 CGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNK 195
  42            CGSCW FS TGALE   A   G++++L+EQ LVDC+  + NHGC GGL  QAFEYI  N
  43 Sbjct: 141 CGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNH 200
  44
  45 Query: 196 GIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEV-T 254
  46            G+  E+SYPY G++ +C FN +   A  K  V+    DE  +  AVA   P+S A +
  47 Sbjct: 201 GVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGH 260
  48
  49 Query: 255 EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKXXXXXXXXXXXYFLI 313
  50              F +YK GVY    C  + ++++H VL VGYG +     YWIVK           Y  I
  51 Sbjct: 261 RSFQLYKKGVYYDEEC--SSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRI 318
  52
  53 Query: 314 ERGK-NMCGLAACASYPI 330
  54             R + N CG+A  ASYP+
  55 Sbjct: 319 ARNRNNHCGVATKASYPL 336
  56
  57
  58 >F41E6.6 CE10254   cysteine protease and a protease inhibitor (ST.LOUIS)
  59            TR:O16454 protein_id:AAB65956.1
  60           Length = 498
  61
  62  Score =  166 bits (419), Expect = 2e-41
  63  Identities = 108/325 (33%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
  64
  65 Query: 33  FTSWMKQHQKTYSS-REYSHRLQVFANNWRKI-QAHNQRNHTFKMGLNQFSDMSFAEIKH 90
  66            F  ++ +H+K Y++ RE   R +VF  N + I +       T   G  +FSDM+  E K
  67 Sbjct: 174 FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKK 233
  68
  69 Query: 91  ---KYLWSEP----QNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFS 143
  70                Y W +P    +  +  K +        P S DWR+KG  V+ VKNQG CGSCW FS
  71 Sbjct: 234 IMLPYQWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKG-AVTQVKNQGNCGSCWAFS 292
  72
  73 Query: 144 TTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFE------------YI 191
  74            TTG +E A  IA  K+++L+EQ+LVDC  +  + GC GGLPS A++             +
  75 Sbjct: 293 TTGNVEGAWFIAKNKLVSLSEQELVDC--DSMDQGCNGGLPSNAYKIGKFVVSDNYCFLV 350
  76
  77 Query: 192 LYNK---------GIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVA 242
  78             Y+K         G+  ED+YPY G+   C    +    ++   V +  +DE  M + +
  79 Sbjct: 351 FYHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELP-HDEVEMQKWLV 409
  80
  81 Query: 243 LYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXX 302
  82               P+S           Y+ GV         P  +NH VL VGYG+     YWIVK
  83 Sbjct: 410 TKGPISIGLN-ANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWG 468
  84
  85 Query: 303 XXXXXXXYFLIERGKNMCGLAACAS 327
  86                   YF + RGKN+CG+   A+
  87 Sbjct: 469 PNWGEAGYFKLYRGKNVCGVQEMAT 493
  88
  89
  90 >R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2
  91           Length = 383
  92
  93  Score =  162 bits (410), Expect = 3e-40
  94  Identities = 97/304 (31%), Positives = 157/304 (50%), Gaps = 19/304 (6%)
  95
  96 Query: 37  MKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKH------ 90
  97            +K  +K  S  E+ +R Q+F  N  + +A  +RN    + +N+F+D +  E++
  98 Sbjct: 87  LKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQKMVQENK 146
  99
 100 Query: 91  --KYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGAL 148
 101              KY +  P+     + +YL      P+S+DWR++G + +P+KNQG CGSCW F+T  ++
 102 Sbjct: 147 YTKYDFDTPK----FEGSYLETGVIRPASIDWREQGKL-TPIKNQGQCGSCWAFATVASV 201
 103
 104 Query: 149 ESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG- 207
 105            E+  AI  GK+++L+EQ++VDC  +  N+GC GG    A +++  N G+  E  YPY
 106 Sbjct: 202 EAQNAIKKGKLVSLSEQEMVDC--DGRNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSAL 258
 107
 108 Query: 208 KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSS 267
 109            K+ QC         F+ +   +  N+E  +   V    PV+F   V +    Y+SG+++
 110 Sbjct: 259 KHDQCFLKENDTRVFIDD-FRMLSNNEEDIANWVGTKGPVTFGMNVVKAMYSYRSGIFNP 317
 111
 112 Query: 268 NSCHKTPDKVN-HAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKNMCGLAACA 326
 113            +    T   +  HA+  +GYG +    YWIVK           YF + RG N CGLA
 114 Sbjct: 318 SVEDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRLARGVNSCGLANTV 377
 115
 116 Query: 327 SYPI 330
 117              PI
 118 Sbjct: 378 VAPI 381
 119
 120
 121 >R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810
 122            protein_id:CAA89070.1
 123           Length = 402
 124
 125  Score =  126 bits (316), Expect = 2e-29
 126  Identities = 97/325 (29%), Positives = 152/325 (45%), Gaps = 31/325 (9%)
 127
 128 Query: 20  TAELTVNAIEKFHFTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNH--TFKMG 76
 129            T E  +  I K  + ++ ++  K+Y+ S+E   RL  + N    I   N +N   + + G
 130 Sbjct: 78  TNERGIQNIAK-EYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEYG 136
 131
 132 Query: 77  LNQFSDMSFAEIK--------HKYLWSE-------PQNCSATKSNYLRGTGPYPSSMDWR 121
 133             N  SD +  E +        +K L  E       P++ +A K      + P+P   DWR
 134 Sbjct: 137 HNDMSDWTDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKKGE---SSSPFPDFFDWR 193
 135
 136 Query: 122 KKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQG 181
 137             K NV++PVK QG CGSCW F++T  +E+A AIA G+   L+EQ L+DC  +  ++ C G
 138 Sbjct: 194 DK-NVITPVKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDG 250
 139
 140 Query: 182 GLPSQAFEYILYNKGIMGEDSYPYIG-KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEA 240
 141            G   +AF YI +  G+      PY+  +   C  N       +K       +DE +++
 142 Sbjct: 251 GDEDKAFRYI-HRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIK-AAYFLHHDEDSIINW 308
 143
 144 Query: 241 VALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVK 298
 145            +  + PV+    V +    YK GV++ +      + +  HA+L  GYG  + G  YWIVK
 146 Sbjct: 309 LVNFGPVNIGMAVIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVK 368
 147
 148 Query: 299 XX-XXXXXXXXXYFLIERGKNMCGL 322
 149                        Y    RG N CG+
 150 Sbjct: 369 NSWGNTWGVEHGYIYFARGINACGI 393
 151
 152
 153 >Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4
 154            protein_id:CAA22062.1
 155           Length = 343
 156
 157  Score =  123 bits (309), Expect = 1e-28
 158  Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 26/304 (8%)
 159
 160 Query: 26  NAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH---TFKMGLNQFSD 82
 161            NA + F    +++++   Y   E   R  +F+ N   ++ +N+ +    T++  LN FSD
 162 Sbjct: 49  NAFQNF-LVKYLREYPNEY---EIVKRFTIFSRNLDLVERYNKEDAGKVTYE--LNDFSD 102
 163
 164 Query: 83  MSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKG--NVVSPVKNQGACGSC 139
 165            ++  E K   +  +P +   + K   L      P+S+DWR     N V+ +K QG CGSC
 166 Sbjct: 103 LTEEEWKKYLMTPKPDHSEKSLKPKTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSC 162
 167
 168 Query: 140 WTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMG 199
 169            W F+T  A+ESAV+I+ G + +L+ QQL+DC     +  C GG P +A +Y   + GI
 170 Sbjct: 163 WAFATAAAIESAVSISGGGLQSLSSQQLLDC--TVVSDKCGGGEPVEALKY-AQSHGITT 219
 171
 172 Query: 200 EDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNP-VSFAFEVTEDFM 258
 173              +YPY     +C+      VA + + +     DE  M + VAL  P +  A   T
 174 Sbjct: 220 AHNYPYYFWTTKCR-ETVPTVARISSWMKAESEDE--MAQIVALNGPMIVCANFATNKNR 276
 175
 176 Query: 259 MYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKN 318
 177             Y SG+     C   P    HA++ +GYG      YWI+K           Y  ++R  N
 178 Sbjct: 277 FYHSGIAEDPDCGTEP---THALIVIGYGPD----YWILKNTYSKVWGEKGYMRVKRDVN 329
 179
 180 Query: 319 MCGL 322
 181             CG+
 182 Sbjct: 330 WCGI 333
 183
 184
 185 >Y113G7B.15 CE23295    (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1
 186           Length = 328
 187
 188  Score =  120 bits (302), Expect = 9e-28
 189  Identities = 94/317 (29%), Positives = 140/317 (43%), Gaps = 40/317 (12%)
 190
 191 Query: 40  HQKTYSS-REYSHRLQVFANNWRKIQAHNQ------RNHTFKMGLNQFSDMSFAEIKHKY 92
 192            H+K Y +  E   RL  FA N +KIQ  N       RN TF  G N+F+D +  E+  +
 193 Sbjct: 3   HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTF--GWNKFADKNRQELSARN 60
 194
 195 Query: 93  LWSEPQNCSAT---KSNYLRGTGPYPSSMDWRKKGN----------------VVSPVKNQ 133
 196                P+N +     K  + RG+  + +    R+ G+                VV PVK+Q
 197 Sbjct: 61  SKIHPKNHTDLPIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQ 120
 198
 199 Query: 134 GACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILY 193
 200              CG CW F+TT   E+A  + S    +L++Q++ DCA + +  GC GG P    + +++
 201 Sbjct: 121 EQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLK-MVH 179
 202
 203 Query: 194 NKGIMGEDSYPY----IGKNGQCKFNPEKAVAFVKNVVNITLND-----EAAMVEAVALY 244
 204             +G   +  YPY        G C    EK+       +N+   D     E  M      +
 205 Sbjct: 180 LRGQSSDGDYPYEEYRANTTGNC-VGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNH 238
 206
 207 Query: 245 NPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKXXXXX 303
 208             P +  F V E+F  Y SGV  S  C++      H+V  VGYG   +G+ YW+V+
 209 Sbjct: 239 IPTAVYFRVGENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYGTSDDGVPYWLVRNSWNS 298
 210
 211 Query: 304 XXXXXXYFLIERGKNMC 320
 212                  Y  I RG N C
 213 Sbjct: 299 DWGLHGYVKIRRGVNWC 315
 214
 215
 216 >K02E7.10 CE11640   protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1
 217           Length = 299
 218
 219  Score =  114 bits (284), Expect = 1e-25
 220  Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
 221
 222 Query: 118 MDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIAS-GKMMTLAEQQLVDCAQNFNN 176
 223            +DWR+KG +V PVK+QG C + + F+   A+ES  A A+ GK+++ +EQQ++DCA NF N
 224 Sbjct: 84  LDWREKG-IVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCA-NFTN 141
 225
 226 Query: 177 HGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKN--GQCKFNPEKAVAFVKNVVNITLNDE 234
 227              CQ  L +      L   G+  E  YPY+GK   G+C+++  K +      +++  N+E
 228 Sbjct: 142 P-CQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSK-MKLRPTYIDVYPNEE 199
 229
 230 Query: 235 AAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLY 294
 231             A    +  +    F       F  YK+G+Y+             ++  VGYG+     Y
 232 Sbjct: 200 WARAH-ITTFGTGYFRMRSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAEKY 258
 233
 234 Query: 295 WIVKXXXXXXXXXXXYFLIERGKNMCGLAACASYPI 330
 235            WIVK           Y  + R  N CG+A   S PI
 236 Sbjct: 259 WIVKGSFGTSWGEHGYMKLARNVNACGMAESISIPI 294
 237
 238
 239 >C32B5.7 CE08515   cathepsin-like peptidase (ST.LOUIS) TR:P91111
 240            protein_id:AAB37963.1
 241           Length = 250
 242
 243  Score =  108 bits (270), Expect = 5e-24
 244  Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 18/197 (9%)
 245
 246 Query: 106 NYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQ 165
 247            NY     P+   +DWR +G VV PVK+QG C + + F+   A+ES  AIA+G++++ +EQ
 248 Sbjct: 63  NYKNAKKPF---LDWRDEG-VVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQ 118
 249
 250 Query: 166 QLVDCAQNFNNHGCQ-GGLPSQAFEYILYNKGIMGEDSYPYIG-KNGQCKFNPEKAVAFV 223
 251            Q++DC       GC     P  A  Y L  KGI     YP++G KN +C+++ +KA   +
 252 Sbjct: 119 QIIDCL-----GGCAIESDPMMAMTY-LERKGIETYTDYPFVGKKNEKCEYDSKKAYLIL 172
 253
 254 Query: 224 KNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVY--SSNSCHKTPDKVNHAV 281
 255             +  +  ++DE+  +  +    P  F       F  YKSG+Y  +   C  T +K   A+
 256 Sbjct: 173 DDTYD--MSDESLALVFIDERGPGLFTMNTPPSFFNYKSGIYNPTEEECKSTNEK--RAL 228
 257
 258 Query: 282 LAVGYGEQNGLLYWIVK 298
 259              VGYG   G  YWIVK
 260 Sbjct: 229 TIVGYGNDKGQNYWIVK 245
 261
 262
 263 >Y51A2D.8 CE19204   Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7
 264            protein_id:CAA16407.1
 265           Length = 386
 266
 267  Score =  106 bits (265), Expect = 2e-23
 268  Identities = 82/330 (24%), Positives = 137/330 (40%), Gaps = 44/330 (13%)
 269
 270 Query: 33  FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKIQAHNQRN----HTFKMGLNQFSDMSFAE 87
 271            F  + K++ + Y    E   R   F  ++  +   N ++    +  + G+N+FSD+S AE
 272 Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102
 273
 274 Query: 88  IKHKYLWSEPQN------------------CSATKSNYLRGTGPYPSSMDWRKKG----N 125
 275               +     P N                      K+ + R +  YP   D R +
 276 Sbjct: 103 FHGRLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYFDLRNEKINGRY 162
 277
 278 Query: 126 VVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPS 185
 279            +V P+K+QG C  CW F+ T  +E+  A  SGK  +L++Q++ DC       GC+GG  +
 280 Sbjct: 163 IVGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTE-GTPGCKGGSLT 221
 281
 282 Query: 186 QAFEYILYNKGIMGEDSYPY----IGKNGQCKFNPEKAV----AFVKNVVNITLNDEAAM 237
 283               +Y+    G+ G++ YPY      +  +C+      +    AF   V+N    +E  +
 284 Sbjct: 222 LGVQYV-KKYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQII 280
 285
 286 Query: 238 VEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG---EQNGLL- 293
 287                    PV+  F+V + F  YK GV   + C +      HA   VGY    +  G
 288 Sbjct: 281 QVLTEWKVPVAVYFKVGDQFKEYKEGVIIEDDCRRATQW--HAGAIVGYDTVEDSRGRSH 338
 289
 290 Query: 294 -YWIVKXXXXXXXXXXXYFLIERGKNMCGL 322
 291             YWI+K           Y  + RG++ C +
 292 Sbjct: 339 DYWIIKNSWGGDWAESGYVRVVRGRDWCSI 368
 293
 294
 295 >Y71H2AR.2 CE22930    (ST.LOUIS) protein_id:AAK29985.1
 296           Length = 345
 297
 298  Score =  103 bits (257), Expect = 1e-22
 299  Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
 300
 301 Query: 91  KYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALES 150
 302            ++ W  P +   T   +L          DWR+KG +V PVK+QG C +   F+ T ++ES
 303 Sbjct: 69  RFQWETPIHMDRTTEEFL----------DWREKG-IVGPVKDQGKCNASHAFAITSSIES 117
 304
 305 Query: 151 AVAIAS-GKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGK- 208
 306              A A+ G +++ +EQQL+DC       GC+      A  Y L   GI  E  YPY+ K
 307 Sbjct: 118 MYAKATNGTLLSFSEQQLIDCNDQ-GYKGCEEQFAMNAIGY-LATHGIETEADYPYVDKT 175
 308
 309 Query: 209 NGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSN 268
 310            N +C F+  K+   +K  V    N+    V  V  Y P  F          YK G+Y+ +
 311 Sbjct: 176 NEKCTFDSTKSKIHLKKGVVAEGNEVLGKVY-VTNYGPAFFTMRAPPSLYDYKIGIYNPS 234
 312
 313 Query: 269 SCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKNMCGLA 323
 314                T      +++ VGYG +    YWIVK           Y  + R  N C +A
 315 Sbjct: 235 IEECTSTHEIRSMVIVGYGIEGEQKYWIVKGSFGTSWGEQGYMKLARDVNACAMA 289
 316
 317
 318 >C50F4.3 CE05468   thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1
 319           Length = 374
 320
 321  Score =  102 bits (254), Expect = 3e-22
 322  Identities = 86/319 (26%), Positives = 129/319 (39%), Gaps = 31/319 (9%)
 323
 324 Query: 33  FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKI----QAHNQRNHTFKMGLNQFSDMSFAE 87
 325            F  ++ ++++ Y    E   R Q F     ++    +A  +  H  K G+N+FSD+S  E
 326 Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106
 327
 328 Query: 88  IKHKYLWSEP--QNCSATKSNYL-----RGTGPYPSSMDWRKKG----NVVSPVKNQGAC 136
 329            I   Y    P   N +  K N       R     P + D R K      ++ P+K Q +C
 330 Sbjct: 107 IHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGLPKTFDLRNKKVGGHYIIGPIKTQDSC 166
 331
 332 Query: 137 GSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKG 196
 333              CW F+ T   E+A+ +   K M L+EQ++ DCA   +  GC GG P    EYI    G
 334 Sbjct: 167 ACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPK-HGPGCNGGDPVDGLEYI-KEMG 224
 335
 336 Query: 197 IMGEDSYPY-------IGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYN-PVS 248
 337            + G   YP+       +G+    K++ E     +        N E  M   + L N P+S
 338 Sbjct: 225 LTGGKEYPFNVNRSTQLGRCESEKYDRELNPLELDYYAIDPFNAEYQMTHHLYLLNLPIS 284
 339
 340 Query: 249 FAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNG-----LLYWIVKXXXXX 303
 341             AF        Y SG+     C        H+   VGYG         + YWI +
 342 Sbjct: 285 VAFRTGASLSSYLSGILELADCDDEKGGHWHSGAIVGYGTTKNSAGRTVDYWIFRNSWWT 344
 343
 344 Query: 304 XXXXXXYFLIERGKNMCGL 322
 345                  Y  I RG++ C +
 346 Sbjct: 345 DWGDDGYARIVRGEDWCSI 363
 347
 348
 349 >F26E4.3 CE17714   cysteine protease (HINXTON) TR:P90850
 350            protein_id:CAB03007.1
 351           Length = 491
 352
 353  Score = 87.4 bits (215), Expect = 1e-17
 354  Identities = 70/237 (29%), Positives = 102/237 (42%), Gaps = 33/237 (13%)
 355
 356 Query: 115 PSSMDWRKK-GNVVSPVKNQGACGSCWTFSTTGALESAVAIAS-GKM-MTLAEQQLVDCA 171
 357            P   D R K G ++ PV +QG CGS W+ STT      +AI S G++  TL+ QQL+ C
 358 Sbjct: 224 PEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSCN 283
 359
 360 Query: 172 QNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNG-------------------QC 212
 361            Q+    GC+GG   +A+ YI    G++G+  YPY+                       +C
 362 Sbjct: 284 QH-RQKGCEGGYLDRAWWYI-RKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRC 341
 363
 364 Query: 213 KFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVY--SSNSC 270
 365                + + AF         + E  +   +    PV   F V EDF MY  GVY  S  +
 366 Sbjct: 342 PSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAA 401
 367
 368 Query: 271 HKTPDKV---NHAVLAVGYGEQNG----LLYWIVKXXXXXXXXXXXYFLIERGKNMC 320
 369             K    V    H+V  +G+G  +     + YW+             YF + RG+N C
 370 Sbjct: 402 QKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHC 458
 371
 372
 373 >C52E4.1 CE08943  locus:cpr-1 cathepsin-like cysteine protease (HINXTON)
 374            TR:Q18783 protein_id:CAB01410.1
 375           Length = 340
 376
 377  Score = 85.1 bits (209), Expect = 5e-17
 378  Identities = 67/269 (24%), Positives = 111/269 (40%), Gaps = 33/269 (12%)
 379
 380 Query: 82  DMSFAEIKHKYLWSEPQNCSATKSNYLRGTGP--YPSSMDWRKKGNVVSPVKNQGACGSC 139
 381            +M F  +  KY  +      AT+   +  + P  + S   W +  ++   +++Q  CGSC
 382 Sbjct: 66  EMKFKLMDGKYAAAHSDEIRATEQEVVLASVPATFDSRTQWSECKSI-KLIRDQATCGSC 124
 383
 384 Query: 140 WTFSTTGALESAVAIAS--GKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGI 197
 385            W F     +     I +   +   ++   L+ C  +   +GC+GG P QA  +   +KG+
 386 Sbjct: 125 WAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRW-WDSKGV 183
 387
 388 Query: 198 MGEDSYPYIG-----------------KNGQCKFNPEK--AVAFVKN----VVNITLNDE 234
 389            +    Y   G                 K   C  + +   + A+ K+    V    +
 390 Sbjct: 184 VTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKN 243
 391
 392 Query: 235 AAMVEAVALYN-PVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL 293
 393            AA ++A    N PV  AF V EDF  YKSGVY   +         HA+  +G+G ++G
 394 Sbjct: 244 AASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLG---GHAIKIIGWGTESGSP 300
 395
 396 Query: 294 YWIVKXXXXXXXXXXXYFLIERGKNMCGL 322
 397            YW+V            +F I RG + CG+
 398 Sbjct: 301 YWLVANSWGVNWGESGFFKIYRGDDQCGI 329
 399
 400
 401 >M04G12.2 CE12424   cysteine protease (HINXTON) TR:P92005
 402            protein_id:CAB03209.1
 403           Length = 467
 404
 405  Score = 75.1 bits (183), Expect = 6e-14
 406  Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 44/224 (19%)
 407
 408 Query: 101 SATKSNYLRGTGPYPSSMDWRKKG--NVVSPVKNQGA---CGSCWTFSTTGALESAVAIA 155
 409            S+ KSN L      P+  DWR     N  SP +NQ     CGSCW F TTGAL     +A
 410 Sbjct: 214 SSFKSNDL------PTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVA 267
 411
 412 Query: 156 -SGK--MMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212
 413              G+  M  L+ Q+++DC    N   CQGG      E+    +G++ E    Y   NG+C
 414 Sbjct: 268 RKGRWPMTQLSPQEIIDCNGKGN---CQGGEIGNVLEHAKI-QGLVEEGCNVYRATNGEC 323
 415
 416 Query: 213 KFNPEKAVA----------------FVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256
 417              NP                     +VK+   +   D+  ++  +    P++ A   T+
 418 Sbjct: 324 --NPYHRCGSCWPNECFSLTNYTRYYVKDYGQVQGRDK--IMSEIKKGGPIACAIGATKK 379
 419
 420 Query: 257 F-MMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVK 298
 421            F   Y  GVYS     K+  + NH +   G+G ++NG+ YWI +
 422 Sbjct: 380 FEYEYVKGVYS----EKSDLESNHIISLTGWGVDENGVEYWIAR 419
 423
 424
 425 >F15D4.4 CE28917   cysteine protease (HINXTON) TR:Q93512
 426            protein_id:CAB02487.1
 427           Length = 622
 428
 429  Score = 75.1 bits (183), Expect = 6e-14
 430  Identities = 85/332 (25%), Positives = 130/332 (38%), Gaps = 51/332 (15%)
 431
 432 Query: 25  VNAIEKFH--------FTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH----T 72
 433            ++ +EKF+        F S M       +++E   R  V++   +++  HN        +
 434 Sbjct: 119 LSPLEKFNEAMNNDGAFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSS 178
 435
 436 Query: 73  FKMGLNQFSDMSFAEIKHKYLWSEPQNCSAT------KSNYLRGTGPYPSSMDWRKKGNV 126
 437            +KM  NQFS     E+    L  +    +AT       S   R T P   ++DWR
 438 Sbjct: 179 YKMSTNQFSVALDGEVAPLTLNLDALTPTATVIPATISSRKKRDTEP---TVDWRP---F 232
 439
 440 Query: 127 VSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQL------VDCAQNFNNHGCQ 180
 441            + P+ +Q  CG CW FS    +ES  AI      +L+ QQL      VD      N GC+
 442 Sbjct: 233 LKPILDQSTCGGCWAFSMISMIESFFAIQGYNTSSLSVQQLLTCDTKVDSTYGLANVGCK 292
 443
 444 Query: 181 GGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCK---FNPEKAVAFVKNVVNITLNDEAAM 237
 445            GG    A  Y L           P+  ++  C    F P      + +   I+ N  AA
 446 Sbjct: 293 GGYFQIAGSY-LEVSAARDASLIPFDLEDTSCDSSFFPPVVPTILLFDDGYISGNFTAAQ 351
 447
 448 Query: 238 -------VEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQN 290
 449                   +E      P++       D   Y  GVY  + C      +NHAV+ VG+ +
 450 Sbjct: 352 LITMEQNIEDKVRKGPIAVGMAAGPDIYKYSEGVYDGD-CGTI---INHAVVIVGFTDD- 406
 451
 452 Query: 291 GLLYWIVKXXXXXXXXXXXYFLIER--GKNMC 320
 453               YWI++           YF ++R  GK+ C
 454 Sbjct: 407 ---YWIIRNSWGASWGEAGYFRVKRTPGKDPC 435
 455
 456
 457 >Y71H2AM.3 CE26272    (ST.LOUIS) protein_id:AAK29976.1
 458           Length = 716
 459
 460  Score = 73.9 bits (180), Expect = 1e-13
 461  Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
 462
 463 Query: 92  YLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESA 151
 464            + W  P+    T   +L          DWR KG +V PVK+QG C +   F+ + ++ES
 465 Sbjct: 70  FQWKTPKYTIQTTEEFL----------DWRDKG-IVGPVKDQGKCNASHAFAISSSIESM 118
 466
 467 Query: 152 VAIA-SGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNG 210
 468             A A +G +++ +EQQL+DC  +    GC+      A  Y +++ GI  E  YPY GK
 469 Sbjct: 119 YAKATNGSLLSFSEQQLIDC-DDHGFKGCEEQPAINAVSYFIFH-GIETEADYPYAGKE- 175
 470
 471 Query: 211 QCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYS 266
 472                             N  L++E    E V  Y P  F          YK G+Y+
 473 Sbjct: 176 -----------------NGKLSNETQGKELVTNYGPAFFTMRAPPSLYDYKIGIYN 214
 474
 475
 476 >C32B5.13 CE08521    (ST.LOUIS) TR:P91110 protein_id:AAB37968.1
 477           Length = 150
 478
 479  Score = 71.6 bits (174), Expect = 6e-13
 480  Identities = 45/143 (31%), Positives = 73/143 (50%), Gaps = 10/143 (6%)
 481
 482 Query: 159 MMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGK-NGQCKFNPE 217
 483            +++ +EQQ++DC  NF +  CQ  + S  F   +   G++ E  YPY+GK N +CK++
 484 Sbjct: 10  VLSFSEQQIIDCG-NFTSP-CQENILSHEF---IKKNGVVTEADYPYVGKENEKCKYDEN 64
 485
 486 Query: 218 KAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYS--SNSCHKTPD 275
 487            K   +  N++ +    E  +   +  + P  F  +    F  YK+G+YS     C K  D
 488 Sbjct: 65  KIKLWPTNMLLVGNLPETLLKLFIKEHGPGYFRMKAPPSFFNYKTGIYSPTQEECGKATD 124
 489
 490 Query: 276 KVNHAVLAVGYGEQNGLLYWIVK 298
 491                ++  VGYG + G  YWIVK
 492 Sbjct: 125 A--RSLTIVGYGIEGGQNYWIVK 145
 493
 494
 495   Database: /data_2/jason/blastdb/wormpep62
 496     Posted date:  Sep 3, 2001  2:17 PM
 497   Number of letters in database: 8,813,425
 498   Number of sequences in database:  20,085
 499
 500 Lambda     K      H
 501    0.319    0.131    0.412
 502
 503 Gapped
 504 Lambda     K      H
 505    0.267   0.0410    0.140
 506
 507
 508 Matrix: BLOSUM62
 509 Gap Penalties: Existence: 11, Extension: 1
 510 Number of Hits to DB: 5933049
 511 Number of Sequences: 20085
 512 Number of extensions: 243404
 513 Number of successful extensions: 614
 514 Number of sequences better than 1.0e-10: 17
 515 Number of HSP's better than  0.0 without gapping: 1
 516 Number of HSP's successfully gapped in prelim test: 16
 517 Number of HSP's that attempted gapping in prelim test: 568
 518 Number of HSP's gapped (non-prelim): 17
 519 length of query: 333
 520 length of database: 8,813,425
 521 effective HSP length: 46
 522 effective length of query: 287
 523 effective length of database: 7,889,515
 524 effective search space: 2264290805
 525 effective search space used: 2264290805
 526 T: 11
 527 A: 40
 528 X1: 16 ( 7.4 bits)
 529 X2: 38 (14.6 bits)
 530 X3: 64 (24.7 bits)
 531 S1: 41 (21.8 bits)
 532 S2: 155 (64.3 bits)
 533 BLASTP 2.1.3 [Apr-11-2001]
 534
 535
 536 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
 537 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
 538 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
 539 programs",  Nucleic Acids Res. 25:3389-3402.
 540
 541 Query= CATL_HUMAN
 542          (333 letters)
 543
 544 Database: /data_2/jason/blastdb/wormpep62
 545            20,085 sequences; 8,813,425 total letters
 546
 547 Searching..................................................done
 548
 549                                                                    Score     E
 550 Sequences producing significant alignments:                        (bits)  Value
 551
 552 T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O4573...   334  4e-92
 553 F41E6.6 CE10254   cysteine protease and a protease inhibitor...   194  6e-50
 554 R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id...   176  2e-44
 555 Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4 pr...   133  1e-31
 556 R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810 pr...   130  1e-30
 557
 558 >T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O45734
 559            protein_id:CAB07275.1
 560           Length = 337
 561
 562  Score =  334 bits (857), Expect = 4e-92
 563  Identities = 164/341 (48%), Positives = 228/341 (66%), Gaps = 12/341 (3%)
 564
 565 Query: 1   MNPTLILAAFCLGIASATLTFDHSLEA---QWTKWKAMHNRLYGMNEEGWRRAVWEKNMK 57
 566            MN  ++LA     +A  +      +E+   +W  +K   ++ Y  +EE      + KNM
 567 Sbjct: 1   MNRFILLALVAAVVAVNSAKLSRQIESAIEKWDDYKEDFDKEYSESEEQTYMEAFVKNMI 60
 568
 569 Query: 58  MIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ----NRKPRKGKVFQEPLFYE 113
 570             IE HN+++R G+ +F M +N   D+   ++R+ +NG++    + + +    F  P   +
 571 Sbjct: 61  HIENHNRDHRLGRKTFEMGLNHIADLPFSQYRK-LNGYRRLFGDSRIKNSSSFLAPFNVQ 119
 572
 573 Query: 114 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ 173
 574             P  VDWR+   VT VKNQG CGSCWAFSATGALEGQ  RK G+L+SLSEQNLVDCS
 575 Sbjct: 120 VPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKY 179
 576
 577 Query: 174 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QE 232
 578            GN GCNGGLMD AF+Y++DN G+D+EESYPY+  +  C +N K   A+D G+VD P+  E
 579 Sbjct: 180 GNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDE 239
 580
 581 Query: 233 KALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDN 292
 582            + L  AVAT GPIS+AIDAGH SF  YK+G+Y++ +CSSE++DHGVL+VGYG   T+ ++
 583 Sbjct: 240 EQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECSSEELDHGVLLVGYG---TDPEH 296
 584
 585 Query: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333
 586              YW+VKNSWG  WG  GY+++A++R NHCG+A+ ASYP V
 587 Sbjct: 297 GDYWIVKNSWGAGWGEKGYIRIARNRNNHCGVATKASYPLV 337
 588
 589
 590 >F41E6.6 CE10254   cysteine protease and a protease inhibitor (ST.LOUIS)
 591            TR:O16454 protein_id:AAB65956.1
 592           Length = 498
 593
 594  Score =  194 bits (493), Expect = 6e-50
 595  Identities = 124/330 (37%), Positives = 171/330 (51%), Gaps = 53/330 (16%)
 596
 597 Query: 36  HNRLYGMNEEGWRR-AVWEKNMKMI-ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMN 93
 598            H + Y    E  +R  V++KN K+I EL   E     + FT     F DMT+ EF+++M
 599 Sbjct: 181 HEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTK----FSDMTTMEFKKIML 236
 600
 601 Query: 94  GFQNRKP-----------RKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142
 602             +Q  +P               + +E L    P S DWREKG VT VKNQG CGSCWAFS
 603 Sbjct: 237 PYQWEQPVYPMEQANFEKHDVTINEEDL----PESFDWREKGAVTQVKNQGNCGSCWAFS 292
 604
 605 Query: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQ----YVQDN----- 193
 606             TG +EG  F    +L+SLSEQ LVDC     ++GCNGGL   A++     V DN
 607 Sbjct: 293 TTGNVEGAWFIAKNKLVSLSEQELVDCDSM--DQGCNGGLPSNAYKIGKFVVSDNYCFLV 350
 608
 609 Query: 194 ------------GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVAT 241
 610                        GGL+ E++YPY+   E+C    K       G V++P  E  + K + T
 611 Sbjct: 351 FYHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVT 410
 612
 613 Query: 242 VGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK 299
 614             GPIS+ ++A   +  FY+ G+   F+  C    ++HGVL+VGYG    +     YW+VK
 615 Sbjct: 411 KGPISIGLNA--NTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYG----KDGRKPYWIVK 464
 616
 617 Query: 300 NSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329
 618            NSWG  WG  GY K+ +  +N CG+   A+
 619 Sbjct: 465 NSWGPNWGEAGYFKLYRG-KNVCGVQEMAT 493
 620
 621
 622 >R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2
 623           Length = 383
 624
 625  Score =  176 bits (446), Expect = 2e-44
 626  Identities = 113/309 (36%), Positives = 171/309 (54%), Gaps = 39/309 (12%)
 627
 628 Query: 42  MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR 101
 629            + E  +R  ++ +N+  IE   +E R       + +N F D T EE ++++   Q  K
 630 Sbjct: 96  VEEFEYRYQIFLRNV--IEFEAEEERN--LGLDLDVNEFTDWTDEELQKMV---QENKYT 148
 631
 632 Query: 102 KGKVFQEPLFYEA--------PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR 153
 633            K   F  P F  +        P S+DWRE+G +TP+KNQGQCGSCWAF+   ++E Q
 634 Sbjct: 149 KYD-FDTPKFEGSYLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAI 207
 635
 636 Query: 154 KTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY 213
 637            K G+L+SLSEQ +VDC G   N GC+GG   YA ++V++N GL+SE+ YPY A     K+
 638 Sbjct: 208 KKGKLVSLSEQEMVDCDG--RNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSA----LKH 260
 639
 640 Query: 214 NPKYSVANDTG-FVD----IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP- 267
 641            +  +   NDT  F+D    +   E+ +   V T GP++  ++   ++   Y+ GI F P
 642 Sbjct: 261 DQCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNV-VKAMYSYRSGI-FNPS 318
 643
 644 Query: 268 --DCSSEDMD-HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324
 645              DC+ + M  H + ++GYG E      + YW+VKNSWG  WG  GY ++A+   N CG+
 646 Sbjct: 319 VEDCTEKSMGAHALTIIGYGGEG----ESAYWIVKNSWGTSWGASGYFRLARG-VNSCGL 373
 647
 648 Query: 325 ASAASYPTV 333
 649            A+    P +
 650 Sbjct: 374 ANTVVAPII 382
 651
 652
 653 >Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4
 654            protein_id:CAA22062.1
 655           Length = 343
 656
 657  Score =  133 bits (335), Expect = 1e-31
 658  Identities = 91/284 (32%), Positives = 146/284 (51%), Gaps = 28/284 (9%)
 659
 660 Query: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107
 661            R  ++ +N+ ++E +N+E   GK   T  +N F D+T EE+++ +      KP   +
 662 Sbjct: 71  RFTIFSRNLDLVERYNKE-DAGK--VTYELNDFSDLTEEEWKKYL---MTPKPDHSEKSL 124
 663
 664 Query: 108 EPLFY----EAPRSVDWRE---KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS 160
 665            +P         P SVDWR      +VT +K QG CGSCWAF+   A+E  +    G L S
 666 Sbjct: 125 KPKTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSISGGGLQS 184
 667
 668 Query: 161 LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVA 220
 669            LS Q L+DC+    ++ C GG    A +Y Q + G+ +  +YPY      C+     +VA
 670 Sbjct: 185 LSSQQLLDCT--VVSDKCGGGEPVEALKYAQSH-GITTAHNYPYYFWTTKCRETVP-TVA 240
 671
 672 Query: 221 NDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLV 280
 673              + ++   + E  + + VA  GP+ V  +       FY  GI  +PDC +E   H ++V
 674 Sbjct: 241 RISSWMK-AESEDEMAQIVALNGPMIVCANFATNKNRFYHSGIAEDPDCGTEP-THALIV 298
 675
 676 Query: 281 VGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324
 677            +GYG +        YW++KN++ + WG  GY+++ +D  N CGI
 678 Sbjct: 299 IGYGPD--------YWILKNTYSKVWGEKGYMRVKRD-VNWCGI 333
 679
 680
 681 >R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810
 682            protein_id:CAA89070.1
 683           Length = 402
 684
 685  Score =  130 bits (327), Expect = 1e-30
 686  Identities = 89/265 (33%), Positives = 130/265 (48%), Gaps = 27/265 (10%)
 687
 688 Query: 78  NAFGDMTSEEFRQVM--NGFQNRKPRKGKVFQEPLFYEA-----------PRSVDWREKG 124
 689            N   D T EEF + +    F  R  ++ + F EP+               P   DWR+K
 690 Sbjct: 138 NDMSDWTDEEFEKTLLPKSFYKRLHKEAE-FIEPIPESLTAKKGESSSPFPDFFDWRDKN 196
 691
 692 Query: 125 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 184
 693             +TPVK QGQCGSCWAF++T  +E       G   +LSEQ L+DC     +  C+GG  D
 694 Sbjct: 197 VITPVKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDCD--LVDNACDGGDED 254
 695
 696 Query: 185 YAFQYVQDNGGLDSEESYPYEA-TEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVG 243
 697             AF+Y+  N GL +    PY A  +  C  N  ++         +   E +++  +   G
 698 Sbjct: 255 KAFRYIHRN-GLANAVDLPYVAHRQNGCAVNDHWNTTRIKAAYFLHHDEDSIINWLVNFG 313
 699
 700 Query: 244 PISVAIDAGHESFLFYKEGIY--FEPDCSSEDMD-HGVLVVGYGFESTESDNNKYWLVKN 300
 701            P+++ + A  +    YK G++   E  C +E +  H +L+ GYG   T     KYW+VKN
 702 Sbjct: 314 PVNIGM-AVIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYG---TSKTGEKYWIVKN 369
 703
 704 Query: 301 SWGEEWGM-GGYVKMAKDRRNHCGI 324
 705            SWG  WG+  GY+  A+   N CGI
 706 Sbjct: 370 SWGNTWGVEHGYIYFARG-INACGI 393
 707
 708
 709 >Y51A2D.8 CE19204   Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7
 710            protein_id:CAA16407.1
 711           Length = 386
 712
 713  Score =  123 bits (308), Expect = 2e-28
 714  Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 39/322 (12%)
 715
 716 Query: 32  WKAMHNRLYGMNEEGWRRAV-WEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ 90
 717            +K  +NR Y    E  +R   + K+   ++  N + +   +     +N F D+++ EF
 718 Sbjct: 46  FKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHG 105
 719
 720 Query: 91  VMNG-------------FQNRKP-----------RKGKVFQEPLFYEAPRSVDWREKGYV 126
 721             ++              F  +KP            K +  + P +++  R+     +  V
 722 Sbjct: 106 RLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYFDL-RNEKINGRYIV 164
 723
 724 Query: 127 TPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYA 186
 725             P+K+QGQC  CW F+ T  +E      +G+  SLS+Q + DC G +G  GC GG +
 726 Sbjct: 165 GPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDC-GTEGTPGCKGGSLTLG 223
 727
 728 Query: 187 FQYVQDNGGLDSEESYPYEATEES----CKYNPKYSVANDTGF---VDIPKQEKALMKAV 239
 729             QYV+   GL  +E YPY+    +    C+      +     F   V  P++ +  +  V
 730 Sbjct: 224 VQYVK-KYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQIIQV 282
 731
 732 Query: 240 ATVG--PISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG-FESTESDNNKYW 296
 733             T    P++V    G + F  YKEG+  E DC      H   +VGY   E +   ++ YW
 734 Sbjct: 283 LTEWKVPVAVYFKVG-DQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTVEDSRGRSHDYW 341
 735
 736 Query: 297 LVKNSWGEEWGMGGYVKMAKDR 318
 737            ++KNSWG +W   GYV++ + R
 738 Sbjct: 342 IIKNSWGGDWAESGYVRVVRGR 363
 739
 740
 741 >K02E7.10 CE11640   protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1
 742           Length = 299
 743
 744  Score =  119 bits (298), Expect = 3e-27
 745  Identities = 73/219 (33%), Positives = 112/219 (50%), Gaps = 14/219 (6%)
 746
 747 Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR-KTGRLISLSEQNLVDCSGPQGNE 176
 748            +DWREKG V PVK+QG+C + +AF+A  A+E    +   G+L+S SEQ ++DC+
 749 Sbjct: 84  LDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCA--NFTN 141
 750
 751 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEE--SCKYNPKYSVANDTGFVDIPKQEKA 234
 752             C   L +          G+ +E  YPY   E    C+Y+        T ++D+   E+
 753 Sbjct: 142 PCQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSKMKLRPT-YIDVYPNEEW 200
 754
 755 Query: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDN 292
 756                + T G     +     SF  YK GIY   + +C + +    + +VGYG +  E
 757 Sbjct: 201 ARAHITTFGTGYFRM-RSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAE--- 256
 758
 759 Query: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP 331
 760             KYW+VK S+G  WG  GY+K+A++  N CG+A + S P
 761 Sbjct: 257 -KYWIVKGSFGTSWGEHGYMKLARN-VNACGMAESISIP 293
 762
 763
 764 >Y71H2AR.2 CE22930    (ST.LOUIS) protein_id:AAK29985.1
 765           Length = 345
 766
 767  Score =  119 bits (297), Expect = 3e-27
 768  Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
 769
 770 Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT-GRLISLSEQNLVDCSGPQGNE 176
 771            +DWREKG V PVK+QG+C +  AF+ T ++E    + T G L+S SEQ L+DC+  QG +
 772 Sbjct: 86  LDWREKGIVGPVKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDCN-DQGYK 144
 773
 774 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPY-EATEESCKYNPKYSVANDTGFVDIPKQEKAL 235
 775            GC       A  Y+  + G+++E  YPY + T E C ++   S  +    V     E
 776 Sbjct: 145 GCEEQFAMNAIGYLATH-GIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEGNEVLG 203
 777
 778 Query: 236 MKAVATVGPISVAIDAGHESFLFYKEGIYFE--PDCSSEDMDHGVLVVGYGFESTESDNN 293
 779               V   GP    + A   S   YK GIY     +C+S      +++VGYG E  +
 780 Sbjct: 204 KVYVTNYGPAFFTMRA-PPSLYDYKIGIYNPSIEECTSTHEIRSMVIVGYGIEGEQ---- 258
 781
 782 Query: 294 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 332
 783            KYW+VK S+G  WG  GY+K+A+D  N C +A+  +  T
 784 Sbjct: 259 KYWIVKGSFGTSWGEQGYMKLARD-VNACAMATTIAVLT 296
 785
 786
 787 >Y51A2D.1 CE18411   Cysteine proteases (2 domains) (HINXTON) TR:O62484
 788            protein_id:CAA16404.1
 789           Length = 382
 790
 791  Score =  105 bits (262), Expect = 4e-23
 792  Identities = 95/353 (26%), Positives = 148/353 (41%), Gaps = 76/353 (21%)
 793
 794 Query: 28  QWTKWKAMHNRLYGMNEEGWRRA---VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
 795            ++ ++K   +R Y    E   R    V  +N  ++ L+    + G++S   A+N F D+T
 796 Sbjct: 43  EFVEFKKKFSRTYKSEAENQLRLQNFVKSRN-NVVRLNKNAQKAGRNS-NFAVNQFSDLT 100
 797
 798 Query: 85  SEEFRQVMNGF-----------QNRKPRKGKVFQEPLFYEAPRSVDWREKGY-----VTP 128
 799            + E  Q ++ F           +N K   GK   +    E  R+ D R +       V P
 800 Sbjct: 101 TSELHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNSEFARNFDLRSQKVNGRYIVGP 160
 801
 802 Query: 129 VKNQGQCGSCWAFSATGALEG------------------------------QMFRKTGRL 158
 803            +KNQGQC  CW F+ T  LE                               +   K
 804 Sbjct: 161 IKNQGQCACCWGFAVTAMLETIYAVNVGRFKLMSHIPALAPNFSDFDFFFFEFLAKLNMF 220
 805
 806 Query: 159 ISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYS 218
 807            +S S+Q + DC+      GC GG + +  +Y  +N GL SE  YP      + +     +
 808 Sbjct: 221 LSFSDQEMCDCATDGTKAGCAGGGLMWGVEYAINN-GLASEFDYPEFDQNRATRPGTCEA 279
 809
 810 Query: 219 VANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS-SEDMDHG 277
 811            + +D                  T  P++ A  AG  +FL YK G+    DC  +  + H
 812 Sbjct: 280 MDDD-----------------KTFPPVNFA--AG-TAFLQYKSGVLVTEDCDLAGTVWHA 319
 813
 814 Query: 278 VLVVGYGFES-TESDNNKYWLVKNSWG-EEWGMGGYVKMAKDRRNHCGIASAA 328
 815              +VGYG E+     + ++W++KNSWG   WG GGYVK+ +  +N CGI   A
 816 Sbjct: 320 GAIVGYGEENDLRGRSQRFWIMKNSWGVSGWGTGGYVKLIRG-KNWCGIERGA 371
 817
 818
 819 >F26E4.3 CE17714   cysteine protease (HINXTON) TR:P90850
 820            protein_id:CAB03007.1
 821           Length = 491
 822
 823  Score =  100 bits (250), Expect = 1e-21
 824  Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
 825
 826 Query: 113 EAPRSVDWREKG--YVTPVKNQGQCGSCWAFSATGALEGQM-FRKTGRLIS-LSEQNLVD 168
 827            E P   D R+K    + PV +QG CGS W+ S T     ++     GR+ S LS Q L+
 828 Sbjct: 222 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLS 281
 829
 830 Query: 169 CSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPY---EATEESCKYNPKYSVANDTGF 225
 831            C+  +  +GC GG +D A+ Y++  G +  +  YPY   ++ E      PK    N  G
 832 Sbjct: 282 CNQHR-QKGCEGGYLDRAWWYIRKLGVV-GDHCYPYVSGQSREPGHCLIPKRDYTNRQGL 339
 833
 834 Query: 226 -----------------VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPD 268
 835                               +  +E+ +   + T GP+       HE F  Y  G+Y   D
 836 Sbjct: 340 RCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVV-HEDFFMYAGGVYQHSD 398
 837
 838 Query: 269 CSSE-------DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH 321
 839             +++       +  H V V+G+G + +     KYWL  NSWG +WG  GY K+ +   NH
 840 Sbjct: 399 LAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG-ENH 457
 841
 842 Query: 322 CGIAS 326
 843            C I S
 844 Sbjct: 458 CEIES 462
 845
 846
 847 >Y113G7B.15 CE23295    (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1
 848           Length = 328
 849
 850  Score =  100 bits (248), Expect = 2e-21
 851  Identities = 92/317 (29%), Positives = 130/317 (40%), Gaps = 37/317 (11%)
 852
 853 Query: 44  EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNG--------- 94
 854            E+  R A + KN + I+  N + R    + T   N F D   +E     +
 855 Sbjct: 12  EKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSARNSKIHPKNHTDL 71
 856
 857 Query: 95  --FQNRKPRKGKVFQEPLFY----EAPRSVDWRE-----KGYVTPVKNQGQCGSCWAFSA 143
 858              ++ R PR  +            + P   D R+        V PVK+Q QCG CWAF+
 859 Sbjct: 72  PIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQEQCGCCWAFAT 131
 860
 861 Query: 144 TGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYP 203
 862            T   E      +    SLS+Q + DC+      GC GG      + V    G  S+  YP
 863 Sbjct: 132 TAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVHLR-GQSSDGDYP 190
 864
 865 Query: 204 YEA----TEESCKYNPKYSV-----ANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHE 254
 866            YE     T  +C  + K +V      N   F     +E  +        P +V    G E
 867 Sbjct: 191 YEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHIPTAVYFRVG-E 249
 868
 869 Query: 255 SFLFYKEGIYFEPDC--SSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 312
 870            +F +Y  G+    DC   +    H V +VGYG   T  D   YWLV+NSW  +WG+ GYV
 871 Sbjct: 250 NFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYG---TSDDGVPYWLVRNSWNSDWGLHGYV 306
 872
 873 Query: 313 KMAKDRRNHCGIASAAS 329
 874            K+ +   N C I S A+
 875 Sbjct: 307 KIRRG-VNWCLIESHAA 322
 876
 877
 878 >F15D4.4 CE28917   cysteine protease (HINXTON) TR:Q93512
 879            protein_id:CAB02487.1
 880           Length = 622
 881
 882  Score = 97.8 bits (242), Expect = 8e-21
 883  Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 39/296 (13%)
 884
 885 Query: 44  EEGWRRA-VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK 102
 886            +EG +R  V+ K  K ++ HN  Y  G  S+ M+ N F      E   +        P
 887 Sbjct: 149 KEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTNQFSVALDGEVAPLTLNLDALTPTA 208
 888
 889 Query: 103 GKV---FQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLI 159
 890              +          +   +VDWR   ++ P+ +Q  CG CWAFS    +E     +
 891 Sbjct: 209 TVIPATISSRKKRDTEPTVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGYNTS 266
 892
 893 Query: 160 SLSEQNLVDCSGP------QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK- 212
 894            SLS Q L+ C           N GC GG    A  Y++ +   D+    P++  + SC
 895 Sbjct: 267 SLSVQQLLTCDTKVDSTYGLANVGCKGGYFQIAGSYLEVSAARDA-SLIPFDLEDTSCDS 325
 896
 897 Query: 213 ------------YNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYK 260
 898                        ++  Y   N T    I  ++   ++     GPI+V + AG + +  Y
 899 Sbjct: 326 SFFPPVVPTILLFDDGYISGNFTAAQLITMEQN--IEDKVRKGPIAVGMAAGPDIYK-YS 382
 900
 901 Query: 261 EGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAK 316
 902            EG+Y + DC +  ++H V++VG+         + YW+++NSWG  WG  GY ++ +
 903 Sbjct: 383 EGVY-DGDCGT-IINHAVVIVGF--------TDDYWIIRNSWGASWGEAGYFRVKR 428
 904
 905
 906 >C50F4.3 CE05468   thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1
 907           Length = 374
 908
 909  Score = 94.4 bits (233), Expect = 9e-20
 910  Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 36/292 (12%)
 911
 912 Query: 63  NQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ-----------NRKPRKGKVFQEPLF 111
 913            N+  ++  H     +N F D++ +E   + + F            N K  + K   E L
 914 Sbjct: 82  NKAAKKAGHDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGL- 140
 915
 916 Query: 112 YEAPRSVDWREKGY-----VTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNL 166
 917               P++ D R K       + P+K Q  C  CW F+AT   E  +     + ++LSEQ +
 918 Sbjct: 141 ---PKTFDLRNKKVGGHYIIGPIKTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEV 197
 919
 920 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-------ESCKYNPKYS- 218
 921             DC+ P+   GCNGG      +Y+++  GL   + YP+           ES KY+ + +
 922 Sbjct: 198 CDCA-PKHGPGCNGGDPVDGLEYIKEM-GLTGGKEYPFNVNRSTQLGRCESEKYDRELNP 255
 923
 924 Query: 219 VANDTGFVDIPKQEKALMKAVATVG-PISVAIDAGHESFLFYKEGIYFEPDCSSEDMD-- 275
 925            +  D   +D    E  +   +  +  PISVA   G  S   Y  GI    DC  E
 926 Sbjct: 256 LELDYYAIDPFNAEYQMTHHLYLLNLPISVAFRTG-ASLSSYLSGILELADCDDEKGGHW 314
 927
 928 Query: 276 HGVLVVGYGFESTESDNN-KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIAS 326
 929            H   +VGYG     +     YW+ +NSW  +WG  GY ++ +   + C I S
 930 Sbjct: 315 HSGAIVGYGTTKNSAGRTVDYWIFRNSWWTDWGDDGYARIVRG-EDWCSIES 365
 931
 932
 933 >C32B5.7 CE08515   cathepsin-like peptidase (ST.LOUIS) TR:P91111
 934            protein_id:AAB37963.1
 935           Length = 250
 936
 937  Score = 94.0 bits (232), Expect = 1e-19
 938  Identities = 63/191 (32%), Positives = 100/191 (51%), Gaps = 18/191 (9%)
 939
 940 Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG 177
 941            +DWR++G V PVK+QG C + +AF+A  A+E       G+L+S SEQ ++DC G    E
 942 Sbjct: 72  LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDCLGGCAIES 131
 943
 944 Query: 178 CNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPK--YSVANDTGFVDIPKQEKA 234
 945                 M Y      +  G+++   YP+   + E C+Y+ K  Y + +DT   D+  +  A
 946 Sbjct: 132 DPMMAMTYL-----ERKGIETYTDYPFVGKKNEKCEYDSKKAYLILDDT--YDMSDESLA 184
 947
 948 Query: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDN 292
 949            L+  +   GP    ++    SF  YK GIY   E +C S +    + +VGYG +  ++
 950 Sbjct: 185 LV-FIDERGPGLFTMNT-PPSFFNYKSGIYNPTEEECKSTNEKRALTIVGYGNDKGQN-- 240
 951
 952 Query: 293 NKYWLVKNSWG 303
 953              YW+VK S+G
 954 Sbjct: 241 --YWIVKGSFG 249
 955
 956
 957 >M04G12.2 CE12424   cysteine protease (HINXTON) TR:P92005
 958            protein_id:CAB03209.1
 959           Length = 467
 960
 961  Score = 92.0 bits (227), Expect = 4e-19
 962  Identities = 82/288 (28%), Positives = 133/288 (45%), Gaps = 45/288 (15%)
 963
 964 Query: 66  YREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK-GKVFQE---PLFYEA------- 114
 965            Y E      + M++  + +SEE+ +     +    +K GKVF+    P  +E+
 966 Sbjct: 161 YYEPNDEALVDMSSESEESSEEWEEARPYLKCGCLKKSGKVFESKTAPREWESSSFKSND 220
 967
 968 Query: 115 -PRSVDWREKG---YVTPVKNQG---QCGSCWAFSATGALEGQM-FRKTGR--LISLSEQ 164
 969             P   DWR      Y +P +NQ     CGSCW F  TGAL  +    + GR  +  LS Q
 970 Sbjct: 221 LPTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQ 280
 971
 972 Query: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEE---------SCKYNP 215
 973             ++DC+G +GN  C GG +    ++ +  G L  E    Y AT           SC  N
 974 Sbjct: 281 EIIDCNG-KGN--CQGGEIGNVLEHAKIQG-LVEEGCNVYRATNGECNPYHRCGSCWPNE 336
 975
 976 Query: 216 KYSVANDTGFV-----DIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270
 977             +S+ N T +       +  ++K +M  +   GPI+ AI A  +    Y +G+Y E   S
 978 Sbjct: 337 CFSLTNYTRYYVKDYGQVQGRDK-IMSEIKKGGPIACAIGATKKFEYEYVKGVYSEK--S 393
 979
 980 Query: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318
 981              + +H + + G+G    + +  +YW+ +NSWGE WG  G+ ++   +
 982 Sbjct: 394 DLESNHIISLTGWG---VDENGVEYWIARNSWGEAWGELGWFRVVTSK 438
 983
 984
 985 >C52E4.1 CE08943  locus:cpr-1 cathepsin-like cysteine protease (HINXTON)
 986            TR:Q18783 protein_id:CAB01410.1
 987           Length = 340
 988
 989  Score = 88.6 bits (218), Expect = 5e-18
 990  Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 37/251 (14%)
 991
 992 Query: 107 QEPLFYEAPRSVD----WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT--GRLIS 160
 993            QE +    P + D    W E   +  +++Q  CGSCWAF A   +  +   +T   +
 994 Sbjct: 89  QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPI 148
 995
 996 Query: 161 LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY-----PYE---------- 205
 997            +S  +L+ C G     GC GG    A ++    G +   + +     PY
 998 Sbjct: 149 ISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCP 208
 999
1000 Query: 206 -----ATEESCKYNPKYSVANDTGF----VDIPKQEKALMKAVATVGPISVAIDAGHESF 256
1001                 +   SC+     + A D  F      +PK   ++   +   GP+  A    +E F
1002 Sbjct: 209 ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSV-YEDF 267
1003
1004 Query: 257 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAK 316
1005              YK G+Y +         H + ++G+G ES     + YWLV NSWG  WG  G+ K+ +
1006 Sbjct: 268 YKYKSGVY-KHTAGKYLGGHAIKIIGWGTES----GSPYWLVANSWGVNWGESGFFKIYR 322
1007
1008 Query: 317 DRRNHCGIASA 327
1009               + CGI SA
1010 Sbjct: 323 G-DDQCGIESA 332
1011
1012
1013 >F32B5.8 CE09855   cysteine proteinase (ST.LOUIS) TR:O01850
1014            protein_id:AAB54210.1
1015           Length = 427
1016
1017  Score = 88.2 bits (217), Expect = 6e-18
1018  Identities = 85/288 (29%), Positives = 130/288 (44%), Gaps = 54/288 (18%)
1019
1020 Query: 75  MAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF---YEA--------PRSVDWREK 123
1021            +A +A+G +     R   N  +    + G+VF+   +   YE         P++ DWR+
1022 Sbjct: 137 LASSAYGKVRKYSNRNRYN-LKGCYKQTGRVFEHKRYDRIYETEDFDSEDLPKTWDWRDA 195
1023
1024 Query: 124 G---YVTPVKNQG---QCGSCWAFSATGALEGQMFRKTGRL---ISLSEQNLVDCSGP-- 172
1025                Y +  +NQ     CGSCWAF AT AL  ++  K         LS Q ++DCSG
1026 Sbjct: 196 NGINYASADRNQHIPQYCGSCWAFGATSALADRINIKRKNAWPQAYLSVQEVIDCSGAGT 255
1027
1028 Query: 173 --QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK-YN-------------PK 216
1029               G E   GG+  YA ++     G+  E    Y+A +  C  YN
1030 Sbjct: 256 CVMGGEP--GGVYKYAHEH-----GIPHETCNNYQARDGKCDPYNRCGSCWPGECFSIKN 308
1031
1032 Query: 217 YSVANDTGFVDIPKQEKALMKA-VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD 275
1033            Y++   + +  +   EK  MKA +   GPI+  I A  ++F  Y  GIY E   + ED+D
1034 Sbjct: 309 YTLYKVSEYGTVHGYEK--MKAEIYHKGPIACGI-AATKAFETYAGGIYKE--VTDEDID 363
1035
1036 Query: 276 HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCG 323
1037            H + V G+G +       +YW+ +NSWGE WG  G+ K+   +  + G
1038 Sbjct: 364 HIISVHGWGVD--HESGVEYWIGRNSWGEPWGEHGWFKIVTSQYKNAG 409
1039
1040
1041 >F57F5.1 CE05999   cysteine protease (HINXTON) TR:Q20950
1042            protein_id:CAB00098.1
1043           Length = 400
1044
1045  Score = 85.9 bits (211), Expect = 3e-17
1046  Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 51/280 (18%)
1047
1048 Query: 89  RQVMNGFQNRKPRKGKVFQ--EPLFYEA--PRSVD----WREKGYVTPVKNQGQCGSCWA 140
1049            +Q+M       P + +VF+   P   +A  P S D    W     ++ +++Q  CGSCWA
1050 Sbjct: 117 KQLMGAKMVEIPEEYRVFEMTHPEVEDAAVPDSFDSRTAWPNCPSISKIRDQSSCGSCWA 176
1051
1052 Query: 141 FSATGALEGQ--MFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY--------- 189
1053             SA   +  +  +      ++S+S  ++  C G     GCNGG    A+++
1054 Sbjct: 177 VSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKGYVTG 236
1055
1056 Query: 190 --VQDNGGLD-------------------SEESYPYEATEESCKYNPKYSVANDTGF--- 225
1057               QD  G                         YP +  E SC+     +   D  F
1058 Sbjct: 237 GSYQDKTGCKPYPYPPCEHHVNGTHYKPCPSNMYPTDKCERSCQAGYALTYQQDLHFGQS 296
1059
1060 Query: 226 -VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG 284
1061               + K+   + K + T GP+ VA    +E F  Y  G+Y     +S    H V ++G+G
1062 Sbjct: 297 AYAVSKKAAEIQKEIMTHGPVEVAFTV-YEDFEHYSGGVYVHTAGASLG-GHAVKMLGWG 354
1063
1064 Query: 285 FESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324
1065             +    +   YWL  NSW E+WG  GY ++ +   N CGI
1066 Sbjct: 355 VD----NGTPYWLCANSWNEDWGENGYFRIIRG-VNECGI 389
1067
1068
1069 >T10H4.12 CE27590  locus:cpr-3 protease (HINXTON) TR:Q9TW93
1070            protein_id:CAB61024.2
1071           Length = 370
1072
1073  Score = 77.4 bits (189), Expect = 1e-14
1074  Identities = 80/345 (23%), Positives = 131/345 (37%), Gaps = 76/345 (22%)
1075
1076 Query: 12  LGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKH 71
1077            +G +   +  DH    Q T W A HN +          + +E   K++++
1078 Sbjct: 27  IGQSPQKVLVDHVNTVQ-TSWVAEHNEI----------SEFEMKFKVMDV---------- 65
1079
1080 Query: 72  SFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREK----GYVT 127
1081             F   +    D+ SE F             +G++  EPL    P + D REK      +
1082 Sbjct: 66  KFAEPLEKDSDVASELFV------------RGEIVPEPL----PDTFDAREKWPDCNTIK 109
1083
1084 Query: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTG--RLISLSEQNLVDCSGPQGNEGCNGGLMDY 185
1085             ++NQ  CGSCWAF A   +  ++  ++   +   +S ++++ C G     GC GG
1086 Sbjct: 110 LIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGGYSIE 169
1087
1088 Query: 186 AFQYVQDNGGLDSEE-----SYPY----------EATEESCK-----------YNPKYSV 219
1089            A ++   +G +   +       PY          E+T  SCK           Y
1090 Sbjct: 170 ALRFWASSGAVTGGDYGGHGCMPYSFAPCTKNCPESTTPSCKTTCQSSYKTEEYKKDKHY 229
1091
1092 Query: 220 ANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 279
1093                  V   K    +   +   GP+  +    +E F  YK G+Y           H V
1094 Sbjct: 230 GASAYKVTTTKSVTEIQTEIYHYGPVEASYKV-YEDFYHYKSGVYHYTSGKLVG-GHAVK 287
1095
1096 Query: 280 VVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324
1097            ++G+G E    +   YWL+ NSWG  +G  G+ K+ +   N C I
1098 Sbjct: 288 IIGWGVE----NGVDYWLIANSWGTSFGEKGFFKIRRG-TNECQI 327
1099
1100
1101 >F36D3.9 CE15973   cysteine protease (HINXTON) TR:O45466
1102            protein_id:CAB04322.1
1103           Length = 345
1104
1105  Score = 77.0 bits (188), Expect = 1e-14
1106  Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 36/245 (14%)
1107
1108 Query: 109 PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS--LSEQNL 166
1109            PL ++A     W +   +  ++ Q  CGSCWAFS    +  +    +       +S  +L
1110 Sbjct: 102 PLNFDA--RTRWPQCKSMKLIREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDL 159
1111
1112 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEE-------SYPYEATEE---------- 209
1113            + C G    EGC+GG    AFQ+    G +   +        YP
1114 Sbjct: 160 LTCCGMSCGEGCDGGFPYRAFQWWARRGVVTGGDYLGTGCKPYPIRPCNSDNCVNLQTPP 219
1115
1116 Query: 210 ---SCKYNPKYSVANDTGF-----VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKE 261
1117               SC+   + +  ND  +       +P+   A+   +   GP+ VA    +E F  YK
1118 Sbjct: 220 CRLSCQPGYRTTYTNDKNYGSNSAYPVPRTVAAIQADIYYNGPV-VAAFIVYEDFEKYKS 278
1119
1120 Query: 262 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH 321
1121            GIY      S+   H V ++G+G E        YWL  NSWG +WG  G  ++ +   +
1122 Sbjct: 279 GIYRHIAGRSKG-GHAVKLIGWGTER----GTPYWLAVNSWGSQWGESGTFRILRG-VDE 332
1123
1124 Query: 322 CGIAS 326
1125            CGI S
1126 Sbjct: 333 CGIES 337
1127
1128
1129 >C25B8.3 CE04078  locus:cpr-6  (ST.LOUIS) protein_id:AAK39189.1
1130           Length = 379
1131
1132  Score = 77.0 bits (188), Expect = 1e-14
1133  Identities = 67/255 (26%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
1134
1135 Query: 113 EAPRSVD----WREKGYVTPVKNQGQCGSCWAFSATGALEGQM-FRKTGRL-ISLSEQNL 166
1136            + P S D    W +   +  +++Q  CGSCWAF A  A+  ++     G L ++LS  +L
1137 Sbjct: 104 DIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDL 163
1138
1139 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSE--------ESYPYEATEESCKYN---- 214
1140            + C    G  GCNGG    A++Y   +G +           + YP+   E   K
1141 Sbjct: 164 LSCCKSCGF-GCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDP 222
1142
1143 Query: 215 --------PKYSVANDTGFVDIPKQE---------------KALMKAVATVGPISVAIDA 251
1144                    PK      + + D    E               +A+ K + T GP+ +A +
1145 Sbjct: 223 CPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEV 282
1146
1147 Query: 252 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY 311
1148             +E FL Y  G+Y           H V ++G+G +    D   YW V NSW  +WG  G+
1149 Sbjct: 283 -YEDFLNYDGGVYVHTG-GKLGGGHAVKLIGWGID----DGIPYWTVANSWNTDWGEDGF 336
1150
1151 Query: 312 VKMAKDRRNHCGIAS 326
1152             ++ +   + CGI S
1153 Sbjct: 337 FRILRG-VDECGIES 350
1154
1155
1156 >W07B8.4 CE14680   thiol protease (ST.LOUIS) TR:O16288 protein_id:AAB65345.1
1157           Length = 335
1158
1159  Score = 75.9 bits (185), Expect = 3e-14
1160  Identities = 66/249 (26%), Positives = 99/249 (39%), Gaps = 47/249 (18%)
1161
1162 Query: 120 WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS--LSEQNLVDCSGPQGN-- 175
1163            W +   V  +++Q  CGSCWA +A  A+  +    +   ++  LS ++++ C   + N
1164 Sbjct: 83  WPQCISVNNIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDILTCCTGKFNCG 142
1165
1166 Query: 176 EGCNGGLMDYAFQYVQDNG---GLDSEESY---PYEAT---------------------- 207
1167            +GC GG    A++Y   NG   G   E  Y   PY
1168 Sbjct: 143 DGCEGGYPIQAWRYWVKNGLVTGGSFESQYGCKPYSIAPCGETIDGVTWPECPMKISDTP 202
1169
1170 Query: 208 --EESCKYNPKYSVAND------TGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFY 259
1171              E  C  N  Y +  D           I +  K +   +   GP+ V     +E F  Y
1172 Sbjct: 203 KCEHHCTGNNSYPIPYDQDKHFGASAYAIGRSAKQIQTEILAHGPVEVGFIV-YEDFYLY 261
1173
1174 Query: 260 KEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR 319
1175            K GIY       E   H V ++G+G ++       YWL  NSW   WG  GY ++ +
1176 Sbjct: 262 KTGIYTHV-AGGELGGHAVKMLGWGVDN----GTPYWLAANSWNTVWGEKGYFRILRG-V 315
1177
1178 Query: 320 NHCGIASAA 328
1179            + CGI SAA
1180 Sbjct: 316 DECGIESAA 324
1181
1182
1183 >Y71H2AM.3 CE26272    (ST.LOUIS) protein_id:AAK29976.1
1184           Length = 716
1185
1186  Score = 68.6 bits (166), Expect = 5e-12
1187  Identities = 55/168 (32%), Positives = 81/168 (47%), Gaps = 23/168 (13%)
1188
1189 Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT-GRLISLSEQNLVDCSGPQGNE 176
1190            +DWR+KG V PVK+QG+C +  AF+ + ++E    + T G L+S SEQ L+DC    G +
1191 Sbjct: 86  LDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDCD-DHGFK 144
1192
1193 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALM 236
1194            GC       A  Y   + G+++E  YPY   E          ++N+T       Q K L
1195 Sbjct: 145 GCEEQPAINAVSYFIFH-GIETEADYPYAGKENG-------KLSNET-------QGKEL- 188
1196
1197 Query: 237 KAVATVGPISVAIDAGHESFLFYKEGIYFE--PDCSSEDMDHGVLVVG 282
1198              V   GP    + A   S   YK GIY     +C+S      +++VG
1199 Sbjct: 189 --VTNYGPAFFTMRA-PPSLYDYKIGIYNPSIEECTSTHEIRSMVIVG 233
1200
1201
1202   Database: /data_2/jason/blastdb/wormpep62
1203     Posted date:  Sep 3, 2001  2:17 PM
1204   Number of letters in database: 8,813,425
1205   Number of sequences in database:  20,085
1206
1207 Lambda     K      H
1208    0.317    0.133    0.417
1209
1210 Gapped
1211 Lambda     K      H
1212    0.267   0.0410    0.140
1213
1214
1215 Matrix: BLOSUM62
1216 Gap Penalties: Existence: 11, Extension: 1
1217 Number of Hits to DB: 6230268
1218 Number of Sequences: 20085
1219 Number of extensions: 270881
1220 Number of successful extensions: 651
1221 Number of sequences better than 1.0e-10: 23
1222 Number of HSP's better than  0.0 without gapping: 4
1223 Number of HSP's successfully gapped in prelim test: 19
1224 Number of HSP's that attempted gapping in prelim test: 588
1225 Number of HSP's gapped (non-prelim): 27
1226 length of query: 333
1227 length of database: 8,813,425
1228 effective HSP length: 45
1229 effective length of query: 288
1230 effective length of database: 7,909,600
1231 effective search space: 2277964800
1232 effective search space used: 2277964800
1233 T: 11
1234 A: 40
1235 X1: 16 ( 7.3 bits)
1236 X2: 38 (14.6 bits)
1237 X3: 64 (24.7 bits)
1238 S1: 41 (21.6 bits)
1239 S2: 155 (64.3 bits)
1240 BLASTP 2.1.3 [Apr-11-2001]
1241
1242
1243 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
1244 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
1245 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
1246 programs",  Nucleic Acids Res. 25:3389-3402.
1247
1248 Query= CATL_RAT
1249          (334 letters)
1250
1251 Database: /data_2/jason/blastdb/wormpep62
1252            20,085 sequences; 8,813,425 total letters
1253
1254 Searching..................................................done
1255
1256                                                                    Score     E
1257 Sequences producing significant alignments:                        (bits)  Value
1258
1259 T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O4573...   325  2e-89
1260 F41E6.6 CE10254   cysteine protease and a protease inhibitor...   203  1e-52
1261 R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id...   192  2e-49
1262 R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810 pr...   139  2e-33
1263 Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4 pr...   131  5e-31
1264
1265 >T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O45734
1266            protein_id:CAB07275.1
1267           Length = 337
1268
1269  Score =  325 bits (834), Expect = 2e-89
1270  Identities = 159/311 (51%), Positives = 208/311 (66%), Gaps = 9/311 (2%)
1271
1272 Query: 28  QWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEE 87
1273            +W  +K    + Y  +EE+     + KNM  I+ HN ++  G+  F M +N   D+   +
1274 Sbjct: 31  KWDDYKEDFDKEYSESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPFSQ 90
1275
1276 Query: 88  FRQIVNGYRH----QKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSA 143
1277            +R++ NGYR      + K    F  P  +Q+P  VDWR+   VT VKNQG CGSCWAFSA
1278 Sbjct: 91  YRKL-NGYRRLFGDSRIKNSSSFLAPFNVQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSA 149
1279
1280 Query: 144 SGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203
1281            +G LEGQ   K G+L+SLSEQNLVDCS   GN GCNGGLMD AF+YI++N G+D+EESYP
1282 Sbjct: 150 TGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYP 209
1283
1284 Query: 204 YEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSG 262
1285            Y+ +D  C +  +   A+D G+VD P+  E+ L  AVAT GPIS+A+DA H S Q Y  G
1286 Sbjct: 210 YKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKG 269
1287
1288 Query: 263 IYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHC 322
1289            +YY+  CSS++LDHGVL+VGY   GTD     YW+VKNSWG  WG  GYI+IA++RNNHC
1290 Sbjct: 270 VYYDEECSSEELDHGVLLVGY---GTDPEHGDYWIVKNSWGAGWGEKGYIRIARNRNNHC 326
1291
1292 Query: 323 GLATAASYPIV 333
1293            G+AT ASYP+V
1294 Sbjct: 327 GVATKASYPLV 337
1295
1296
1297 >F41E6.6 CE10254   cysteine protease and a protease inhibitor (ST.LOUIS)
1298            TR:O16454 protein_id:AAB65956.1
1299           Length = 498
1300
1301  Score =  203 bits (516), Expect = 1e-52
1302  Identities = 122/331 (36%), Positives = 183/331 (54%), Gaps = 45/331 (13%)
1303
1304 Query: 36  HRRLYGTNEEEWRR-AVWEKNMRMI-QLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVN 93
1305            H + Y    E  +R  V++KN ++I +L   E     +GFT     F DMT  EF++I+
1306 Sbjct: 181 HEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTK----FSDMTTMEFKKIML 236
1307
1308 Query: 94  GYRHQKH----KKGRLFQEPLMLQ---IPKTVDWREKGCVTPVKNQGQCGSCWAFSASGC 146
1309             Y+ ++     ++    +  + +    +P++ DWREKG VT VKNQG CGSCWAFS +G
1310 Sbjct: 237 PYQWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVKNQGNCGSCWAFSTTGN 296
1311
1312 Query: 147 LEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQ----YIKEN--------- 193
1313            +EG  F+   KL+SLSEQ LVDC  D  +QGCNGGL   A++     + +N
1314 Sbjct: 297 VEGAWFIAKNKLVSLSEQELVDC--DSMDQGCNGGLPSNAYKIGKFVVSDNYCFLVFYHK 354
1315
1316 Query: 194 --------GGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPI 245
1317                    GGL+ E++YPY+ +  +C    +       G V++P  E  + K + T GPI
1318 Sbjct: 355 TTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPI 414
1319
1320 Query: 246 SVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWG 303
1321            S+ ++A+  +LQFY  G+   ++  C    L+HGVL+VGYG +G    +  YW+VKNSWG
1322 Sbjct: 415 SIGLNAN--TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG----RKPYWIVKNSWG 468
1323
1324 Query: 304 KEWGMDGYIKIAKDRNNHCGLATAASYPIVN 334
1325              WG  GY K+ + + N CG+   A+  +VN
1326 Sbjct: 469 PNWGEAGYFKLYRGK-NVCGVQEMATSALVN 498
1327
1328
1329 >R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2
1330           Length = 383
1331
1332  Score =  192 bits (488), Expect = 2e-49
1333  Identities = 116/310 (37%), Positives = 176/310 (56%), Gaps = 29/310 (9%)
1334
1335 Query: 37  RRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYR 96
1336            R+     E E+R  ++ +N+  I+    E  N   G  +++N F D T+EE +++V   +
1337 Sbjct: 91  RKYTSVEEFEYRYQIFLRNV--IEFEAEEERN--LGLDLDVNEFTDWTDEELQKMVQENK 146
1338
1339 Query: 97  HQKHKKGRLFQEPLMLQI----PKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMF 152
1340            + K+       E   L+     P ++DWRE+G +TP+KNQGQCGSCWAF+    +E Q
1341 Sbjct: 147 YTKYDFDTPKFEGSYLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNA 206
1342
1343 Query: 153 LKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCK 212
1344            +K GKL+SLSEQ +VDC  D  N GC+GG   +A +++KEN GL+SE+ YPY A     K
1345 Sbjct: 207 IKKGKLVSLSEQEMVDC--DGRNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSA----LK 259
1346
1347 Query: 213 YRAEYAVANDTG-FVD----IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYE- 266
1348            +   +   NDT  F+D    +   E+ +   V T GP++  M+    ++  Y SGI+
1349 Sbjct: 260 HDQCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNVV-KAMYSYRSGIFNPS 318
1350
1351 Query: 267 -PNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGL 324
1352              +C+ K +  H + ++GYG EG    +  YW+VKNSWG  WG  GY ++A+  N+ CGL
1353 Sbjct: 319 VEDCTEKSMGAHALTIIGYGGEG----ESAYWIVKNSWGTSWGASGYFRLARGVNS-CGL 373
1354
1355 Query: 325 ATAASYPIVN 334
1356            A     PI+N
1357 Sbjct: 374 ANTVVAPIIN 383
1358
1359
1360 >R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810
1361            protein_id:CAA89070.1
1362           Length = 402
1363
1364  Score =  139 bits (351), Expect = 2e-33
1365  Identities = 96/307 (31%), Positives = 154/307 (49%), Gaps = 36/307 (11%)
1366
1367 Query: 40  YGTNEEEWRRAV----WEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIV--N 93
1368            Y T++E  +R       ++N+    + N E+ + ++G     N   D T+EEF + +
1369 Sbjct: 101 YATSQESLKRLNAYYNTDENIANWNIQN-EHGSAEYGH----NDMSDWTDEEFEKTLLPK 155
1370
1371 Query: 94  GYRHQKHKKGRLFQEPLMLQI-----------PKTVDWREKGCVTPVKNQGQCGSCWAFS 142
1372             +  + HK+   F EP+   +           P   DWR+K  +TPVK QGQCGSCWAF+
1373 Sbjct: 156 SFYKRLHKEAE-FIEPIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFA 214
1374
1375 Query: 143 ASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESY 202
1376            ++  +E    +  G+  +LSEQ L+DC  D  +  C+GG  D AF+YI  N GL +
1377 Sbjct: 215 STATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDGGDEDKAFRYIHRN-GLANAVDL 271
1378
1379 Query: 203 PYEA-KDGSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSS 261
1380            PY A +   C     +          +   E +++  +   GP+++ M    P ++ Y
1381 Sbjct: 272 PYVAHRQNGCAVNDHWNTTRIKAAYFLHHDEDSIINWLVNFGPVNIGMAVIQP-MRAYKG 330
1382
1383 Query: 262 GIY--YEPNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMD-GYIKIAKD 317
1384            G++   E  C ++ +  H +L+ GY   GT    +KYW+VKNSWG  WG++ GYI  A+
1385 Sbjct: 331 GVFTPSEYACKNEVIGLHALLITGY---GTSKTGEKYWIVKNSWGNTWGVEHGYIYFARG 387
1386
1387 Query: 318 RNNHCGL 324
1388              N CG+
1389 Sbjct: 388 -INACGI 393
1390
1391
1392 >Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4
1393            protein_id:CAA22062.1
1394           Length = 343
1395
1396  Score =  131 bits (330), Expect = 5e-31
1397  Identities = 88/284 (30%), Positives = 152/284 (52%), Gaps = 24/284 (8%)
1398
1399 Query: 48  RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQ 107
1400            R  ++ +N+ +++ +N E + GK   T E+N F D+T EE+++ +   +   H +  L
1401 Sbjct: 71  RFTIFSRNLDLVERYNKEDA-GK--VTYELNDFSDLTEEEWKKYLMTPKPD-HSEKSLKP 126
1402
1403 Query: 108 EPLM--LQIPKTVDWRE---KGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLS 162
1404            + L+    +P +VDWR       VT +K QG CGSCWAF+ +  +E  + +  G L SLS
1405 Sbjct: 127 KTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSISGGGLQSLS 186
1406
1407 Query: 163 EQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVAND 222
1408             Q L+DC+    +  C GG    A +Y + + G+ +  +YPY      C+      VA
1409 Sbjct: 187 SQQLLDCT--VVSDKCGGGEPVEALKYAQSH-GITTAHNYPYYFWTTKCRETVP-TVARI 242
1410
1411 Query: 223 TGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVG 282
1412            + ++   + E  + + VA  GP+ V  + +    +FY SGI  +P+C ++   H ++V+G
1413 Sbjct: 243 SSWMK-AESEDEMAQIVALNGPMIVCANFATNKNRFYHSGIAEDPDCGTEP-THALIVIG 300
1414
1415 Query: 283 YGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLAT 326
1416            YG +        YW++KN++ K WG  GY+++ +D  N CG+ T
1417 Sbjct: 301 YGPD--------YWILKNTYSKVWGEKGYMRVKRD-VNWCGINT 335
1418
1419
1420 >K02E7.10 CE11640   protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1
1421           Length = 299
1422
1423  Score =  128 bits (321), Expect = 6e-30
1424  Identities = 81/222 (36%), Positives = 125/222 (55%), Gaps = 18/222 (8%)
1425
1426 Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175
1427            +DWREKG V PVK+QG+C + +AF+A   +E  M+ K   GKL+S SEQ ++DC++
1428 Sbjct: 84  LDWREKGIVGPVKDQGKCNASYAFAAIAAIE-SMYAKANNGKLLSFSEQQIIDCAN--FT 140
1429
1430 Query: 176 QGCNGGLMD-FAFQYIKENGGLDSEESYPYEAKD--GSCKYRAEYAVANDTGFVDIPQQE 232
1431              C   L +  + +++KEN G+ +E  YPY  K+  G C+Y +       T ++D+   E
1432 Sbjct: 141 NPCQENLENVLSNRFLKEN-GVGTEADYPYVGKENVGKCEYDSSKMKLRPT-YIDVYPNE 198
1433
1434 Query: 233 KALMKAVATVGPISVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDS 290
1435            +     + T G     M  S PS   Y +GIY   +  C + +    + +VGYG +G
1436 Sbjct: 199 EWARAHITTFGTGYFRM-RSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGA-- 255
1437
1438 Query: 291 NKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPI 332
1439              +KYW+VK S+G  WG  GY+K+A++  N CG+A + S PI
1440 Sbjct: 256 --EKYWIVKGSFGTSWGEHGYMKLARN-VNACGMAESISIPI 294
1441
1442
1443 >Y71H2AR.2 CE22930    (ST.LOUIS) protein_id:AAK29985.1
1444           Length = 345
1445
1446  Score =  120 bits (301), Expect = 1e-27
1447  Identities = 81/214 (37%), Positives = 114/214 (52%), Gaps = 14/214 (6%)
1448
1449 Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175
1450            +DWREKG V PVK+QG+C +  AF+ +  +E  M+ K   G L+S SEQ L+DC +DQG
1451 Sbjct: 86  LDWREKGIVGPVKDQGKCNASHAFAITSSIE-SMYAKATNGTLLSFSEQQLIDC-NDQGY 143
1452
1453 Query: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAK-DGSCKYRAEYAVANDTGFVDIPQQEKA 234
1454            +GC       A  Y+  + G+++E  YPY  K +  C + +  +  +    V     E
1455 Sbjct: 144 KGCEEQFAMNAIGYLATH-GIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEGNEVL 202
1456
1457 Query: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYE--PNCSSKDLDHGVLVVGYGYEGTDSNK 292
1458                V   GP    M A  PSL  Y  GIY      C+S      +++VGYG EG    +
1459 Sbjct: 203 GKVYVTNYGPAFFTMRAP-PSLYDYKIGIYNPSIEECTSTHEIRSMVIVGYGIEG----E 257
1460
1461 Query: 293 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLAT 326
1462             KYW+VK S+G  WG  GY+K+A+D  N C +AT
1463 Sbjct: 258 QKYWIVKGSFGTSWGEQGYMKLARD-VNACAMAT 290
1464
1465
1466 >Y51A2D.8 CE19204   Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7
1467            protein_id:CAA16407.1
1468           Length = 386
1469
1470  Score =  108 bits (271), Expect = 4e-24
1471  Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
1472
1473 Query: 126 VTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDF 185
1474            V P+K+QGQC  CW F+ +  +E      +GK  SLS+Q + DC   +G  GC GG +
1475 Sbjct: 164 VGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCG-TEGTPGCKGGSLTL 222
1476
1477 Query: 186 AFQYIKENGGLDSEESYPYE---AKDG-SCKYRAEYAVANDTGF---VDIPQQEKALMKA 238
1478              QY+K+  GL  +E YPY+   A  G  C+ R    +     F   V  P++ +  +
1479 Sbjct: 223 GVQYVKKY-GLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQIIQ 281
1480
1481 Query: 239 VATVGPISVAMDAS-HPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYG-YEGTDSNKDKYW 296
1482            V T   + VA+        + Y  G+  E +C      H   +VGY   E +      YW
1483 Sbjct: 282 VLTEWKVPVAVYFKVGDQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTVEDSRGRSHDYW 341
1484
1485 Query: 297 LVKNSWGKEWGMDGYIKIAKDRN 319
1486            ++KNSWG +W   GY+++ + R+
1487 Sbjct: 342 IIKNSWGGDWAESGYVRVVRGRD 364
1488
1489
1490 >Y113G7B.15 CE23295    (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1
1491           Length = 328
1492
1493  Score = 99.4 bits (246), Expect = 3e-21
1494  Identities = 87/321 (27%), Positives = 127/321 (39%), Gaps = 47/321 (14%)
1495
1496 Query: 36  HRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNG 94
1497            H++ Y T  E+ RR A + KN + IQ  N +        T   N F D   +E     N
1498 Sbjct: 3   HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQEL-SARNS 61
1499
1500 Query: 95  YRHQKHKKGRLFQEPLMLQ----------------IPKTVDWRE-----KGCVTPVKNQG 133
1501              H K+       +P   +                IP   D R+        V PVK+Q
1502 Sbjct: 62  KIHPKNHTDLPIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQE 121
1503
1504 Query: 134 QCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKEN 193
1505            QCG CWAF+ +   E    L +    SLS+Q + DC+      GC GG      + +
1506 Sbjct: 122 QCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVHLR 181
1507
1508 Query: 194 GGLDSEESYPYEA----KDGSCKYRAEYAVAN---------DTGFVDIPQQEKALMKAVA 240
1509             G  S+  YPYE       G+C    +  V           D  + +    E   +  +
1510 Sbjct: 182 -GQSSDGDYPYEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHIP 240
1511
1512 Query: 241 TVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLD--HGVLVVGYGYEGTDSNKDKYWLV 298
1513            T     V       + ++Y+SG+    +C        H V +VGY   GT  +   YWLV
1514 Sbjct: 241 TAVYFRVG-----ENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGY---GTSDDGVPYWLV 292
1515
1516 Query: 299 KNSWGKEWGMDGYIKIAKDRN 319
1517            +NSW  +WG+ GY+KI +  N
1518 Sbjct: 293 RNSWNSDWGLHGYVKIRRGVN 313
1519
1520
1521 >C50F4.3 CE05468   thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1
1522           Length = 374
1523
1524  Score = 98.2 bits (243), Expect = 6e-21
1525  Identities = 80/270 (29%), Positives = 119/270 (43%), Gaps = 27/270 (10%)
1526
1527 Query: 71  HGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKG-------RLFQEPLMLQIPKTVDWREK 123
1528            H     +N F D++ +E   + + +   K+           L  +  M  +PKT D R K
1529 Sbjct: 90  HDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGLPKTFDLRNK 149
1530
1531 Query: 124 GC-----VTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGC 178
1532                   + P+K Q  C  CW F+A+   E  + +   K ++LSEQ + DC+   G  GC
1533 Sbjct: 150 KVGGHYIIGPIKTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPKHG-PGC 208
1534
1535 Query: 179 NGGLMDFAFQYIKENGGLDSEESYPYEAKD----GSC---KYRAEY-AVANDTGFVDIPQ 230
1536            NGG      +YIKE  GL   + YP+        G C   KY  E   +  D   +D
1537 Sbjct: 209 NGGDPVDGLEYIKEM-GLTGGKEYPFNVNRSTQLGRCESEKYDRELNPLELDYYAIDPFN 267
1538
1539 Query: 231 QEKALMKAVATVG-PISVAMDASHPSLQFYSSGIYYEPNCSSKDLD--HGVLVVGYGYEG 287
1540             E  +   +  +  PISVA   +  SL  Y SGI    +C  +     H   +VGYG
1541 Sbjct: 268 AEYQMTHHLYLLNLPISVAF-RTGASLSSYLSGILELADCDDEKGGHWHSGAIVGYGTTK 326
1542
1543 Query: 288 TDSNKD-KYWLVKNSWGKEWGMDGYIKIAK 316
1544              + +   YW+ +NSW  +WG DGY +I +
1545 Sbjct: 327 NSAGRTVDYWIFRNSWWTDWGDDGYARIVR 356
1546
1547
1548 >F26E4.3 CE17714   cysteine protease (HINXTON) TR:P90850
1549            protein_id:CAB03007.1
1550           Length = 491
1551
1552  Score = 97.8 bits (242), Expect = 8e-21
1553  Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 35/241 (14%)
1554
1555 Query: 113 QIPKTVDWREKG--CVTPVKNQGQCGSCWAFSASGCLEGQM-FLKTGKLIS-LSEQNLVD 168
1556            ++P+  D R+K    + PV +QG CGS W+ S +     ++  +  G++ S LS Q L+
1557 Sbjct: 222 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLS 281
1558
1559 Query: 169 CSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEA----KDGSCKY----------- 213
1560            C+  +  +GC GG +D A+ YI++ G +  +  YPY +    + G C
1561 Sbjct: 282 CNQHR-QKGCEGGYLDRAWWYIRKLGVV-GDHCYPYVSGQSREPGHCLIPKRDYTNRQGL 339
1562
1563 Query: 214 RAEYAVANDTGFVDIP-----QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPN 268
1564            R      + T F   P      +E+ +   + T GP+       H     Y+ G+Y   +
1565 Sbjct: 340 RCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATF-VVHEDFFMYAGGVYQHSD 398
1566
1567 Query: 269 CSSK-------DLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNH 321
1568             +++       +  H V V+G+G + +     KYWL  NSWG +WG DGY K+ +   NH
1569 Sbjct: 399 LAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG-ENH 457
1570
1571 Query: 322 C 322
1572            C
1573 Sbjct: 458 C 458
1574
1575
1576 >F15D4.4 CE28917   cysteine protease (HINXTON) TR:Q93512
1577            protein_id:CAB02487.1
1578           Length = 622
1579
1580  Score = 96.7 bits (239), Expect = 2e-20
1581  Identities = 65/219 (29%), Positives = 102/219 (45%), Gaps = 35/219 (15%)
1582
1583 Query: 117 TVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDC------S 170
1584            TVDWR    + P+ +Q  CG CWAFS    +E    ++     SLS Q L+ C      +
1585 Sbjct: 226 TVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGYNTSSLSVQQLLTCDTKVDST 283
1586
1587 Query: 171 HDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCK-------------YRAEY 217
1588            +   N GC GG    A  Y++ +   D+    P++ +D SC              +   Y
1589 Sbjct: 284 YGLANVGCKGGYFQIAGSYLEVSAARDAS-LIPFDLEDTSCDSSFFPPVVPTILLFDDGY 342
1590
1591 Query: 218 AVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHG 277
1592               N T    I  ++    K     GPI+V M A+ P +  YS G+Y + +C +  ++H
1593 Sbjct: 343 ISGNFTAAQLITMEQNIEDKV--RKGPIAVGM-AAGPDIYKYSEGVY-DGDCGTI-INHA 397
1594
1595 Query: 278 VLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAK 316
1596            V++VG+         D YW+++NSWG  WG  GY ++ +
1597 Sbjct: 398 VVIVGF--------TDDYWIIRNSWGASWGEAGYFRVKR 428
1598
1599
1600 >C32B5.7 CE08515   cathepsin-like peptidase (ST.LOUIS) TR:P91111
1601            protein_id:AAB37963.1
1602           Length = 250
1603
1604  Score = 90.1 bits (222), Expect = 2e-18
1605  Identities = 63/191 (32%), Positives = 98/191 (50%), Gaps = 18/191 (9%)
1606
1607 Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQG 177
1608            +DWR++G V PVK+QG C + +AF+A   +E    +  G+L+S SEQ ++DC    G
1609 Sbjct: 72  LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC---LGGCA 128
1610
1611 Query: 178 CNGGLMDFAFQYIKENGGLDSEESYPYEA-KDGSCKY--RAEYAVANDTGFVDIPQQEKA 234
1612                 M  A  Y+ E  G+++   YP+   K+  C+Y  +  Y + +DT   D+  +  A
1613 Sbjct: 129 IESDPM-MAMTYL-ERKGIETYTDYPFVGKKNEKCEYDSKKAYLILDDT--YDMSDESLA 184
1614
1615 Query: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDSNK 292
1616            L+  +   GP    M+ + PS   Y SGIY   E  C S +    + +VGYG    +
1617 Sbjct: 185 LV-FIDERGPGLFTMN-TPPSFFNYKSGIYNPTEEECKSTNEKRALTIVGYG----NDKG 238
1618
1619 Query: 293 DKYWLVKNSWG 303
1620              YW+VK S+G
1621 Sbjct: 239 QNYWIVKGSFG 249
1622
1623
1624 >Y51A2D.1 CE18411   Cysteine proteases (2 domains) (HINXTON) TR:O62484
1625            protein_id:CAA16404.1
1626           Length = 382
1627
1628  Score = 87.8 bits (216), Expect = 8e-18
1629  Identities = 87/350 (24%), Positives = 139/350 (38%), Gaps = 76/350 (21%)
1630
1631 Query: 31  QWKSTHRRLYGTNEEEWRRA---VWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEE 87
1632            ++K    R Y +  E   R    V  +N  +++L+      G++     +N F D+T  E
1633 Sbjct: 46  EFKKKFSRTYKSEAENQLRLQNFVKSRN-NVVRLNKNAQKAGRNS-NFAVNQFSDLTTSE 103
1634
1635 Query: 88  FRQIV---------NGYRHQKHKK--GRLFQEPLMLQIPKTVDWREKGC-----VTPVKN 131
1636              Q +         N   H+  KK  G+   +    +  +  D R +       V P+KN
1637 Sbjct: 104 LHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNSEFARNFDLRSQKVNGRYIVGPIKN 163
1638
1639 Query: 132 QGQCGSCWAFSASGCLEG------------------------------QMFLKTGKLISL 161
1640            QGQC  CW F+ +  LE                               +   K    +S
1641 Sbjct: 164 QGQCACCWGFAVTAMLETIYAVNVGRFKLMSHIPALAPNFSDFDFFFFEFLAKLNMFLSF 223
1642
1643 Query: 162 SEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVAN 221
1644            S+Q + DC+ D    GC GG + +  +Y   N GL SE  YP   ++ + +     A+ +
1645 Sbjct: 224 SDQEMCDCATDGTKAGCAGGGLMWGVEY-AINNGLASEFDYPEFDQNRATRPGTCEAMDD 282
1646
1647 Query: 222 DTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS-SKDLDHGVLV 280
1648            D                  T  P++ A  A    LQ Y SG+    +C  +  + H   +
1649 Sbjct: 283 D-----------------KTFPPVNFA--AGTAFLQ-YKSGVLVTEDCDLAGTVWHAGAI 322
1650
1651 Query: 281 VGYGYEG-TDSNKDKYWLVKNSWG-KEWGMDGYIKIAKDRNNHCGLATAA 328
1652            VGYG E        ++W++KNSWG   WG  GY+K+ + + N CG+   A
1653 Sbjct: 323 VGYGEENDLRGRSQRFWIMKNSWGVSGWGTGGYVKLIRGK-NWCGIERGA 371
1654
1655
1656 >C52E4.1 CE08943  locus:cpr-1 cathepsin-like cysteine protease (HINXTON)
1657            TR:Q18783 protein_id:CAB01410.1
1658           Length = 340
1659
1660  Score = 87.4 bits (215), Expect = 1e-17
1661  Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
1662
1663 Query: 107 QEPLMLQIPKTVD----WREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKT--GKLIS 160
1664            QE ++  +P T D    W E   +  +++Q  CGSCWAF A+  +  +  ++T   +
1665 Sbjct: 89  QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPI 148
1666
1667 Query: 161 LSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESY-----PY----------- 204
1668            +S  +L+ C       GC GG    A ++    G +   + +     PY
1669 Sbjct: 149 ISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCP 208
1670
1671 Query: 205 EAKDGSCKYRAEY----AVANDTGF----VDIPQQEKALMKAVATVGPISVAMDASHPSL 256
1672            E+K  SC    +     A A D  F      +P+   ++   +   GP+  A    +
1673 Sbjct: 209 ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSV-YEDF 267
1674
1675 Query: 257 QFYSSGIYYEPNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIA 315
1676              Y SG+Y   + + K L  H + ++G+G E    +   YWLV NSWG  WG  G+ KI
1677 Sbjct: 268 YKYKSGVY--KHTAGKYLGGHAIKIIGWGTE----SGSPYWLVANSWGVNWGESGFFKIY 321
1678
1679 Query: 316 KDRNNHCGLATA 327
1680            +  ++ CG+ +A
1681 Sbjct: 322 RG-DDQCGIESA 332
1682
1683
1684 >F32B5.8 CE09855   cysteine proteinase (ST.LOUIS) TR:O01850
1685            protein_id:AAB54210.1
1686           Length = 427
1687
1688  Score = 85.9 bits (211), Expect = 3e-17
1689  Identities = 73/261 (27%), Positives = 123/261 (46%), Gaps = 36/261 (13%)
1690
1691 Query: 88  FRQIVNGYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPV---KNQG---QCGSCWAF 141
1692            ++Q    + H+++ +    ++     +PKT DWR+   +      +NQ     CGSCWAF
1693 Sbjct: 160 YKQTGRVFEHKRYDRIYETEDFDSEDLPKTWDWRDANGINYASADRNQHIPQYCGSCWAF 219
1694
1695 Query: 142 SASGCLEGQMFLKTGKL---ISLSEQNLVDCSHDQGNQGC-NGGLMDFAFQYIKENGGLD 197
1696             A+  L  ++ +K         LS Q ++DCS   G   C  GG     ++Y  E+G +
1697 Sbjct: 220 GATSALADRINIKRKNAWPQAYLSVQEVIDCS---GAGTCVMGGEPGGVYKYAHEHG-IP 275
1698
1699 Query: 198 SEESYPYEAKDGSCK-YRA-------------EYAVANDTGFVDIPQQEKALMKA-VATV 242
1700             E    Y+A+DG C  Y                Y +   + +  +   EK  MKA +
1701 Sbjct: 276 HETCNNYQARDGKCDPYNRCGSCWPGECFSIKNYTLYKVSEYGTVHGYEK--MKAEIYHK 333
1702
1703 Query: 243 GPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSW 302
1704            GPI+  + A+  + + Y+ GIY E   + +D+DH + V G+G +    +  +YW+ +NSW
1705 Sbjct: 334 GPIACGIAATK-AFETYAGGIYKE--VTDEDIDHIISVHGWGVD--HESGVEYWIGRNSW 388
1706
1707 Query: 303 GKEWGMDGYIKIAKDRNNHCG 323
1708            G+ WG  G+ KI   +  + G
1709 Sbjct: 389 GEPWGEHGWFKIVTSQYKNAG 409
1710
1711
1712 >M04G12.2 CE12424   cysteine protease (HINXTON) TR:P92005
1713            protein_id:CAB03209.1
1714           Length = 467
1715
1716  Score = 83.2 bits (204), Expect = 2e-16
1717  Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
1718
1719 Query: 114 IPKTVDWREKGCV---TPVKNQG---QCGSCWAFSASGCLEGQMFL-KTGK--LISLSEQ 164
1720            +P   DWR    V   +P +NQ     CGSCW F  +G L  +  + + G+  +  LS Q
1721 Sbjct: 221 LPTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQ 280
1722
1723 Query: 165 NLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLD---------SEESYPYEAKDGSCKYRA 215
1724             ++DC+   G   C GG +    ++ K  G ++         + E  PY  + GSC
1725 Sbjct: 281 EIIDCN---GKGNCQGGEIGNVLEHAKIQGLVEEGCNVYRATNGECNPYH-RCGSCWPNE 336
1726
1727 Query: 216 EYAVANDTGFV-----DIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270
1728             +++ N T +       +  ++K +M  +   GPI+ A+ A+      Y  G+Y E   S
1729 Sbjct: 337 CFSLTNYTRYYVKDYGQVQGRDK-IMSEIKKGGPIACAIGATKKFEYEYVKGVYSEK--S 393
1730
1731 Query: 271 SKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDR 318
1732              + +H + + G+G    D N  +YW+ +NSWG+ WG  G+ ++   +
1733 Sbjct: 394 DLESNHIISLTGWG---VDENGVEYWIARNSWGEAWGELGWFRVVTSK 438
1734
1735
1736 >Y71H2AM.3 CE26272    (ST.LOUIS) protein_id:AAK29976.1
1737           Length = 716
1738
1739  Score = 75.5 bits (184), Expect = 4e-14
1740  Identities = 60/169 (35%), Positives = 83/169 (48%), Gaps = 25/169 (14%)
1741
1742 Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175
1743            +DWR+KG V PVK+QG+C +  AF+ S  +E  M+ K   G L+S SEQ L+DC  D G
1744 Sbjct: 86  LDWRDKGIVGPVKDQGKCNASHAFAISSSIE-SMYAKATNGSLLSFSEQQLIDCD-DHGF 143
1745
1746 Query: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKAL 235
1747            +GC       A  Y   + G+++E  YPY  K+          ++N+T       Q K L
1748 Sbjct: 144 KGCEEQPAINAVSYFIFH-GIETEADYPYAGKENG-------KLSNET-------QGKEL 188
1749
1750 Query: 236 MKAVATVGPISVAMDASHPSLQFYSSGIYYE--PNCSSKDLDHGVLVVG 282
1751               V   GP    M A  PSL  Y  GIY      C+S      +++VG
1752 Sbjct: 189 ---VTNYGPAFFTMRAP-PSLYDYKIGIYNPSIEECTSTHEIRSMVIVG 233
1753
1754
1755 >T10H4.12 CE27590  locus:cpr-3 protease (HINXTON) TR:Q9TW93
1756            protein_id:CAB61024.2
1757           Length = 370
1758
1759  Score = 74.7 bits (182), Expect = 7e-14
1760  Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
1761
1762 Query: 102 KGRLFQEPLMLQIPKTVDWREK----GCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTG- 156
1763            +G +  EPL    P T D REK      +  ++NQ  CGSCWAF A+  +  ++ +++
1764 Sbjct: 84  RGEIVPEPL----PDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNG 139
1765
1766 Query: 157 -KLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEE-----SYPY------ 204
1767             +   +S ++++ C       GC GG    A ++   +G +   +       PY
1768 Sbjct: 140 TQQPVISVEDILSCCGTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPYSFAPCT 199
1769
1770 Query: 205 ----EAKDGSCK-----------YRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAM 249
1771                E+   SCK           Y+ +         V   +    +   +   GP+  +
1772 Sbjct: 200 KNCPESTTPSCKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASY 259
1773
1774 Query: 250 DASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMD 309
1775               +     Y SG+Y+  +       H V ++G+G E    N   YWL+ NSWG  +G
1776 Sbjct: 260 KV-YEDFYHYKSGVYHYTSGKLVG-GHAVKIIGWGVE----NGVDYWLIANSWGTSFGEK 313
1777
1778 Query: 310 GYIKIAKDRN 319
1779            G+ KI +  N
1780 Sbjct: 314 GFFKIRRGTN 323
1781
1782
1783 >F36D3.9 CE15973   cysteine protease (HINXTON) TR:O45466
1784            protein_id:CAB04322.1
1785           Length = 345
1786
1787  Score = 71.6 bits (174), Expect = 6e-13
1788  Identities = 63/235 (26%), Positives = 98/235 (40%), Gaps = 40/235 (17%)
1789
1790 Query: 120 WREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLIS--LSEQNLVDCSHDQGNQG 177
1791            W +   +  ++ Q  CGSCWAFS +  +  +  + +       +S  +L+ C      +G
1792 Sbjct: 111 WPQCKSMKLIREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDLLTCCGMSCGEG 170
1793
1794 Query: 178 CNGGLMDFAFQYIKENGGLDSEE-------SYPYEAKDG-------------SCK--YRA 215
1795            C+GG    AFQ+    G +   +        YP    +              SC+  YR
1796 Sbjct: 171 CDGGFPYRAFQWWARRGVVTGGDYLGTGCKPYPIRPCNSDNCVNLQTPPCRLSCQPGYRT 230
1797
1798 Query: 216 EYAVANDTGF-----VDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270
1799             Y   ND  +       +P+   A+   +   GP+ VA    +   + Y SGIY
1800 Sbjct: 231 TYT--NDKNYGSNSAYPVPRTVAAIQADIYYNGPV-VAAFIVYEDFEKYKSGIYRHIAGR 287
1801
1802 Query: 271 SKDLDHGVLVVGYGYE-GTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGL 324
1803            SK   H V ++G+G E GT      YWL  NSWG +WG  G  +I +   + CG+
1804 Sbjct: 288 SKG-GHAVKLIGWGTERGTP-----YWLAVNSWGSQWGESGTFRILRG-VDECGI 335
1805
1806
1807   Database: /data_2/jason/blastdb/wormpep62
1808     Posted date:  Sep 3, 2001  2:17 PM
1809   Number of letters in database: 8,813,425
1810   Number of sequences in database:  20,085
1811
1812 Lambda     K      H
1813    0.317    0.134    0.426
1814
1815 Gapped
1816 Lambda     K      H
1817    0.267   0.0410    0.140
1818
1819
1820 Matrix: BLOSUM62
1821 Gap Penalties: Existence: 11, Extension: 1
1822 Number of Hits to DB: 6241552
1823 Number of Sequences: 20085
1824 Number of extensions: 276768
1825 Number of successful extensions: 629
1826 Number of sequences better than 1.0e-10: 20
1827 Number of HSP's better than  0.0 without gapping: 4
1828 Number of HSP's successfully gapped in prelim test: 16
1829 Number of HSP's that attempted gapping in prelim test: 578
1830 Number of HSP's gapped (non-prelim): 20
1831 length of query: 334
1832 length of database: 8,813,425
1833 effective HSP length: 44
1834 effective length of query: 290
1835 effective length of database: 7,929,685
1836 effective search space: 2299608650
1837 effective search space used: 2299608650
1838 T: 11
1839 A: 40
1840 X1: 16 ( 7.3 bits)
1841 X2: 38 (14.6 bits)
1842 X3: 64 (24.7 bits)
1843 S1: 41 (21.6 bits)
1844 S2: 156 (64.7 bits)
1845 BLASTP 2.1.3 [Apr-11-2001]
1846
1847
1848 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
1849 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
1850 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
1851 programs",  Nucleic Acids Res. 25:3389-3402.
1852
1853 Query= PAPA_CARPA
1854          (345 letters)
1855
1856 Database: /data_2/jason/blastdb/wormpep62
1857            20,085 sequences; 8,813,425 total letters
1858
1859 Searching..................................................done
1860
1861                                                                    Score     E
1862 Sequences producing significant alignments:                        (bits)  Value
1863
1864 R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id...   174  7e-44
1865 T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O4573...   171  5e-43
1866 Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4 pr...   160  8e-40
1867 F41E6.6 CE10254   cysteine protease and a protease inhibitor...   156  2e-38
1868 Y51A2D.8 CE19204   Cysteine proteases (2 domains) (HINXTON) ...   127  1e-29
1869
1870 >R09F10.1 CE28755   peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2
1871           Length = 383
1872
1873  Score =  174 bits (441), Expect = 7e-44
1874  Identities = 107/348 (30%), Positives = 173/348 (48%), Gaps = 18/348 (5%)
1875
1876 Query: 7   ISKLLFVAICLFVYMGLSFGDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKI 66
1877            +++L    + L + + LSF  F  + +   +L       Q+F  ++LK ++ Y +++E
1878 Sbjct: 45  LTQLFSGLVLLTMLILLSFFVFQRLNHKMENLKHE----QMFNDFILKFDRKYTSVEEFE 100
1879
1880 Query: 67  YRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEV 126
1881            YR++IF  N+   +   ++N    L +N F D +++E ++    +    Y      +E
1882 Sbjct: 101 YRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQKMVQENKYTKYDFDTPKFEGS 160
1883
1884 Query: 127 LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQEL 186
1885              +  V  P  +DWR++G +TP+KNQG CGSCWAF+ V ++E    I+ G L   SEQE+
1886 Sbjct: 161 YLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAIKKGKLVSLSEQEM 220
1887
1888 Query: 187 LDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQV 246
1889            +DCD R+ GC+GGY   A++ V + G+     YPY  ++      ++       D  R +
1890 Sbjct: 221 VDCDGRNNGCSGGYRPYAMKFVKENGLESEKEYPYSALKHDQCFLKENDTRVFIDDFRML 280
1891
1892 Query: 247 QPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKV--DHAVAAVGYGP 301
1893                E    +     PV+  +    K    YR GIF   V  C  K    HA+  +GYG
1894 Sbjct: 281 SNNEEDIANWVGTKGPVTFGMNVV-KAMYSYRSGIFNPSVEDCTEKSMGAHALTIIGYGG 339
1895
1896 Query: 302 N----YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN 345
1897                 Y ++KNSWGT WG +GY R+ RG  +    CGL  +   P+ N
1898 Sbjct: 340 EGESAYWIVKNSWGTSWGASGYFRLARGVNS----CGLANTVVAPIIN 383
1899
1900
1901 >T03E6.7 CE16333   cathepsin-like protease (HINXTON) TR:O45734
1902            protein_id:CAB07275.1
1903           Length = 337
1904
1905  Score =  171 bits (434), Expect = 5e-43
1906  Identities = 107/319 (33%), Positives = 163/319 (50%), Gaps = 25/319 (7%)
1907
1908 Query: 42  ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNN----SYWLGLNVFA 97
1909            E  I+ ++ +    +K Y   +E+ Y  E F  N+ +I+  N+ +     ++ +GLN  A
1910 Sbjct: 26  ESAIEKWDDYKEDFDKEYSESEEQTY-MEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIA 84
1911
1912 Query: 98  DMSNDEFKEK--YTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSC 155
1913            D+   ++++   Y      +      S+    N   V +P+ VDWR    VT VKNQG C
1914 Sbjct: 85  DLPFSQYRKLNGYRRLFGDSRIKNSSSFLAPFN---VQVPDEVDWRDTHLVTDVKNQGMC 141
1915
1916 Query: 156 GSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR--SYGCNGGYPWSALQLVA-QYG 212
1917            GSCWAFSA   +EG    + G L   SEQ L+DC  +  ++GCNGG    A + +   +G
1918 Sbjct: 142 GSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHG 201
1919
1920 Query: 213 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQ-PVSVVLEAAG 271
1921            +    +YPY+G    C   +K    A   G       +E  L  ++A Q P+S+ ++A
1922 Sbjct: 202 VDTEESYPYKGRDMKCHFNKK-TVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGH 260
1923
1924 Query: 272 KDFQLYRGGIFVGP--CGNKVDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKR 324
1925            + FQLY+ G++        ++DH V  VGYG      +Y ++KNSWG GWGE GYIRI R
1926 Sbjct: 261 RSFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRIAR 320
1927
1928 Query: 325 GTGNSYGVCGLYTSSFYPV 343
1929               N    CG+ T + YP+
1930 Sbjct: 321 NRNNH---CGVATKASYPL 336
1931
1932
1933 >Y40H7A.10 CE21821   Cysteine protease (HINXTON) TR:Q9XWA4
1934            protein_id:CAA22062.1
1935           Length = 343
1936
1937  Score =  160 bits (406), Expect = 8e-40
1938  Identities = 100/295 (33%), Positives = 153/295 (50%), Gaps = 15/295 (5%)
1939
1940 Query: 48  FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKE 106
1941            F+++++K+ + Y N  E + RF IF  NL  ++  NK++       LN F+D++ +E+K
1942 Sbjct: 51  FQNFLVKYLREYPNEYEIVKRFTIFSRNLDLVERYNKEDAGKVTYELNDFSDLTEEEWK- 109
1943
1944 Query: 107 KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGA---VTPVKNQGSCGSCWAFSA 163
1945            KY  +   +++   L  + +++    N+P  VDWR       VT +K QG CGSCWAF+
1946 Sbjct: 110 KYLMTPKPDHSEKSLKPKTLIDKK--NLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFAT 167
1947
1948 Query: 164 VVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEG 223
1949               IE  + I  G L   S Q+LLDC   S  C GG P  AL+    +GI   + YPY
1950 Sbjct: 168 AAAIESAVSISGGGLQSLSSQQLLDCTVVSDKCGGGEPVEALKYAQSHGITTAHNYPYYF 227
1951
1952 Query: 224 VQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFV 283
1953                C  RE  P  A+     + +  +E A + ++ N P+ V    A    + Y  GI
1954 Sbjct: 228 WTTKC--RETVPTVARISSWMKAESEDEMAQIVAL-NGPMIVCANFATNKNRFYHSGIAE 284
1955
1956 Query: 284 GP-CGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYT 337
1957             P CG +  HA+  +GYGP+Y ++KN++   WGE GY+R+KR        CG+ T
1958 Sbjct: 285 DPDCGTEPTHALIVIGYGPDYWILKNTYSKVWGEKGYMRVKR----DVNWCGINT 335
1959
1960
1961 >F41E6.6 CE10254   cysteine protease and a protease inhibitor (ST.LOUIS)
1962            TR:O16454 protein_id:AAB65956.1
1963           Length = 498
1964
1965  Score =  156 bits (395), Expect = 2e-38
1966  Identities = 110/327 (33%), Positives = 156/327 (47%), Gaps = 51/327 (15%)
1967
1968 Query: 48  FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWL-GLNVFADMSNDEFKE 106
1969            F  ++ +H K Y N  E + RF +FK N K I E  K      + G   F+DM+  EFK+
1970 Sbjct: 174 FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKK 233
1971
1972 Query: 107 -----KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAF 161
1973                 ++   +          ++  +N+ D  +PE  DWR+KGAVT VKNQG+CGSCWAF
1974 Sbjct: 234 IMLPYQWEQPVYPMEQANFEKHDVTINEED--LPESFDWREKGAVTQVKNQGNCGSCWAF 291
1975
1976 Query: 162 SAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSAL---------------- 205
1977            S    +EG   I    L   SEQEL+DCD    GCNGG P +A
1978 Sbjct: 292 STTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKIGKFVVSDNYCFLVF 351
1979
1980 Query: 206 ------QLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGAL-LYSI 258
1981                  +++   G+   + YPY+G    C    K   A   +G  ++ P++E  +  + +
1982 Sbjct: 352 YHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRK-DIAVYINGSVEL-PHDEVEMQKWLV 409
1983
1984 Query: 259 ANQPVSVVLEAAGKDFQLYRGG------IFVGPCGNKVDHAVAAVGYGPN----YILIKN 308
1985               P+S+ L A     Q YR G      IF  P    ++H V  VGYG +    Y ++KN
1986 Sbjct: 410 TKGPISIGLNA--NTLQFYRHGVVHPFKIFCEPF--MLNHGVLIVGYGKDGRKPYWIVKN 465
1987
1988 Query: 309 SWGTGWGENGYIRIKRGTGNSYGVCGL 335
1989            SWG  WGE GY ++ RG      VCG+
1990 Sbjct: 466 SWGPNWGEAGYFKLYRGK----NVCGV 488
1991
1992
1993 >Y51A2D.8 CE19204   Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7
1994            protein_id:CAA16407.1
1995           Length = 386
1996
1997  Score =  127 bits (318), Expect = 1e-29
1998  Identities = 95/332 (28%), Positives = 148/332 (43%), Gaps = 44/332 (13%)
1999
2000 Query: 37  DLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYW----LG 92
2001            D    E+L + FE +  K+N+ YK+  E   RF  F  +   +D+ N K+ +       G
2002 Sbjct: 32  DRDHPEKLYKAFEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFG 91
2003
2004 Query: 93  LNVFADMSNDEFKEKYTGSIAGNYTTTE-LSYEEVLND---GDVN----------IPEYV 138
2005            +N F+D+S  EF  + +  +  N T    L++++   D    D+N           P+Y
2006 Sbjct: 92  INKFSDLSTAEFHGRLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYF 151
2007
2008 Query: 139 DWRQKGA-----VTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR- 192
2009            D R +       V P+K+QG C  CW F+    +E +    +G     S+QE+ DC
2010 Sbjct: 152 DLRNEKINGRYIVGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTEG 211
2011
2012 Query: 193 SYGCNGGYPWSALQLVAQYGIHYRNTYPYE----GVQRYCRSREKGPYA-AKTDGVRQVQ 247
2013            + GC GG     +Q V +YG+     YPY+       R CR RE      A+      +
2014 Sbjct: 212 TPGCKGGSLTLGVQYVKKYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVIN 271
2015
2016 Query: 248 PYNEGALLYSIANQ---PVSVVLEAAGKDFQLYRGGIFV-GPCGNKVD-HAVAAVGY--- 299
2017            P      +  +  +   PV+V  +  G  F+ Y+ G+ +   C      HA A VGY
2018 Sbjct: 272 PRRAEEQIIQVLTEWKVPVAVYFK-VGDQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTV 330
2019
2020 Query: 300 ------GPNYILIKNSWGTGWGENGYIRIKRG 325
2021                    +Y +IKNSWG  W E+GY+R+ RG
2022 Sbjct: 331 EDSRGRSHDYWIIKNSWGGDWAESGYVRVVRG 362
2023
2024
2025 >R07E3.1 CE02295   cysteine proteinase (HINXTON) TR:Q21810
2026            protein_id:CAA89070.1
2027           Length = 402
2028
2029  Score =  114 bits (286), Expect = 7e-26
2030  Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 41/309 (13%)
2031
2032 Query: 54  KHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNN--SYWLGLNVFADMSNDEFKEKYTGS 111
2033            K +K Y    E + R   + +  + I   N +N   S   G N  +D +++EF++
2034 Sbjct: 96  KFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEYGHNDMSDWTDEEFEKTLLPK 155
2035
2036 Query: 112 IAGNYTTTELSYEEVL--------NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSA 163
2037                    E  + E +         +     P++ DWR K  +TPVK QG CGSCWAF++
2038 Sbjct: 156 SFYKRLHKEAEFIEPIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFAS 215
2039
2040 Query: 164 VVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEG 223
2041              T+E    I  G     SEQ LLDCD     C+GG    A + + + G+      PY
2042 Sbjct: 216 TATVEAAWAIAHGEKRNLSEQTLLDCDLVDNACDGGDEDKAFRYIHRNGLANAVDLPYVA 275
2043
2044 Query: 224 VQR--------YCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDF 274
2045             ++        +  +R K  Y    D         E +++  + N  PV++ + A  +
2046 Sbjct: 276 HRQNGCAVNDHWNTTRIKAAYFLHHD---------EDSIINWLVNFGPVNIGM-AVIQPM 325
2047
2048 Query: 275 QLYRGGIFVG---PCGNKVD--HAVAAVGYGPN-----YILIKNSWGTGWG-ENGYIRIK 323
2049            + Y+GG+F      C N+V   HA+   GYG +     Y ++KNSWG  WG E+GYI
2050 Sbjct: 326 RAYKGGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVKNSWGNTWGVEHGYIYFA 385
2051
2052 Query: 324 RGTGNSYGV 332
2053            RG  N+ G+
2054 Sbjct: 386 RGI-NACGI 393
2055
2056
2057 >C50F4.3 CE05468   thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1
2058           Length = 374
2059
2060  Score =  114 bits (286), Expect = 7e-26
2061  Identities = 97/357 (27%), Positives = 152/357 (42%), Gaps = 39/357 (10%)
2062
2063 Query: 6   SISKLLFVAICLFVYMGLSFG-DFSIVGYSQN-DLTSTERLIQLFESWMLKHNKIYKNID 63
2064            S+  L F+ I +F       G +F    +  N D  + E+L + FE +++K+ + YK+
2065 Sbjct: 3   SLLALFFIQIFIFTVTSFDVGANFEDSFFEINIDRNNPEKLYKEFEDFIVKYKRNYKDEI 62
2066
2067 Query: 64  EKIYRFEIFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKYT--GSIAGNYT 117
2068            EK +RF+ F      + + NK      +    G+N F+D+S  E    Y+  G    N
2069 Sbjct: 63  EKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTN 122
2070
2071 Query: 118 TTELSYEEVLNDGDVN-IPEYVDWRQKGA-----VTPVKNQGSCGSCWAFSAVVTIEGII 171
2072              + + + +     +  +P+  D R K       + P+K Q SC  CW F+A    E  +
2073 Sbjct: 123 VPKFNLKNLRVKRQMEGLPKTFDLRNKKVGGHYIIGPIKTQDSCACCWGFAATAVAEAAL 182
2074
2075 Query: 172 KIRTGNLNEYSEQELLDC-DRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQR---- 226
2076             +        SEQE+ DC  +   GCNGG P   L+ + + G+     YP+  V R
2077 Sbjct: 183 TVHLKKAMNLSEQEVCDCAPKHGPGCNGGDPVDGLEYIKEMGLTGGKEYPF-NVNRSTQL 241
2078
2079 Query: 227 -YCRS----REKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGI 281
2080              C S    RE  P       +       +      + N P+SV     G     Y  GI
2081 Sbjct: 242 GRCESEKYDRELNPLELDYYAIDPFNAEYQMTHHLYLLNLPISVAFR-TGASLSSYLSGI 300
2082
2083 Query: 282 F-VGPCGNKVD---HAVAAVGYGP---------NYILIKNSWGTGWGENGYIRIKRG 325
2084              +  C ++     H+ A VGYG          +Y + +NSW T WG++GY RI RG
2085 Sbjct: 301 LELADCDDEKGGHWHSGAIVGYGTTKNSAGRTVDYWIFRNSWWTDWGDDGYARIVRG 357
2086
2087
2088 >F15D4.4 CE28917   cysteine protease (HINXTON) TR:Q93512
2089            protein_id:CAB02487.1
2090           Length = 622
2091
2092  Score =  110 bits (276), Expect = 1e-24
2093  Identities = 84/290 (28%), Positives = 127/290 (42%), Gaps = 34/290 (11%)
2094
2095 Query: 64  EKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIA------GNYT 117
2096            E + RF ++    K +DE    N  Y LG++ +  MS ++F     G +A         T
2097 Sbjct: 150 EGLKRFNVYSKVKKEVDE---HNIMYELGMSSYK-MSTNQFSVALDGEVAPLTLNLDALT 205
2098
2099 Query: 118 TTELSYEEVLNDGDVNIPE-YVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTG 176
2100             T       ++       E  VDWR    + P+ +Q +CG CWAFS +  IE    I+
2101 Sbjct: 206 PTATVIPATISSRKKRDTEPTVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGY 263
2102
2103 Query: 177 NLNEYSEQELLDCDRR--------SYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYC 228
2104            N +  S Q+LL CD +        + GC GGY   A   +        +  P++     C
2105 Sbjct: 264 NTSSLSVQQLLTCDTKVDSTYGLANVGCKGGYFQIAGSYLEVSAARDASLIPFDLEDTSC 323
2106
2107 Query: 229 RSREKGP-----------YAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLY 277
2108             S    P           Y +      Q+    +  +   +   P++V + AAG D   Y
2109 Sbjct: 324 DSSFFPPVVPTILLFDDGYISGNFTAAQLITMEQN-IEDKVRKGPIAVGM-AAGPDIYKY 381
2110
2111 Query: 278 RGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTG 327
2112              G++ G CG  ++HAV  VG+  +Y +I+NSWG  WGE GY R+KR  G
2113 Sbjct: 382 SEGVYDGDCGTIINHAVVIVGFTDDYWIIRNSWGASWGEAGYFRVKRTPG 431
2114
2115
2116 >Y113G7B.15 CE23295    (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1
2117           Length = 328
2118
2119  Score =  103 bits (256), Expect = 2e-22
2120  Identities = 89/312 (28%), Positives = 132/312 (41%), Gaps = 40/312 (12%)
2121
2122 Query: 53  LKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKY 108
2123            + H K Y+   EK  R   F  N + I E N K      +   G N FAD +  E   +
2124 Sbjct: 1   MHHKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSARN 60
2125
2126 Query: 109 TGSIAGNYTTTELSYEEVLNDGDVN------------IPEYVDWRQ-----KGAVTPVKN 151
2127            +     N+T   + Y+     G  N            IP+Y D R         V PVK+
2128 Sbjct: 61  SKIHPKNHTDLPI-YKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKD 119
2129
2130 Query: 152 QGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDC--DRRSYGCNGGYPWSALQLVA 209
2131            Q  CG CWAF+     E    + + +    S+QE+ DC     + GC GG P + L++V
2132 Sbjct: 120 QEQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVH 179
2133
2134 Query: 210 QYGIHYRNTYPYE----GVQRYCRSREKGP--YAAKTDGVRQVQPYNEGALLYSI-ANQP 262
2135              G      YPYE         C   EK         +  R  Q Y E  ++ ++  N
2136 Sbjct: 180 LRGQSSDGDYPYEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHI 239
2137
2138 Query: 263 VSVVLEAAGKDFQLYRGGIFVGPCGNKVD----HAVAAVGYGPN-----YILIKNSWGTG 313
2139             + V    G++F+ Y  G+       ++     H+VA VGYG +     Y L++NSW +
2140 Sbjct: 240 PTAVYFRVGENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYGTSDDGVPYWLVRNSWNSD 299
2141
2142 Query: 314 WGENGYIRIKRG 325
2143            WG +GY++I+RG
2144 Sbjct: 300 WGLHGYVKIRRG 311
2145
2146
2147 >Y71H2AR.2 CE22930    (ST.LOUIS) protein_id:AAK29985.1
2148           Length = 345
2149
2150  Score = 93.6 bits (231), Expect = 2e-19
2151  Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 29/213 (13%)
2152
2153 Query: 131 DVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDC 189
2154            D    E++DWR+KG V PVK+QG C +  AF+   +IE +  K   G L  +SEQ+L+DC
2155 Sbjct: 79  DRTTEEFLDWREKGIVGPVKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDC 138
2156
2157 Query: 190 DRRSY-GCNGGYPWSALQLVAQYGIHYRNTYPY-EGVQRYC-----RSR---EKGPYAAK 239
2158            + + Y GC   +  +A+  +A +GI     YPY +     C     +S+   +KG  A
2159 Sbjct: 139 NDQGYKGCEEQFAMNAIGYLATHGIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEG 198
2160
2161 Query: 240 TDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKVD-HAVA 295
2162             + + +V   N G   +++   P              Y+ GI+   +  C +  +  ++
2163 Sbjct: 199 NEVLGKVYVTNYGPAFFTMRAPP----------SLYDYKIGIYNPSIEECTSTHEIRSMV 248
2164
2165 Query: 296 AVGYG----PNYILIKNSWGTGWGENGYIRIKR 324
2166             VGYG      Y ++K S+GT WGE GY+++ R
2167 Sbjct: 249 IVGYGIEGEQKYWIVKGSFGTSWGEQGYMKLAR 281
2168
2169
2170 >K02E7.10 CE11640   protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1
2171           Length = 299
2172
2173  Score = 93.6 bits (231), Expect = 2e-19
2174  Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
2175
2176 Query: 136 EYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDCDRRSY 194
2177            +++DWR+KG V PVK+QG C + +AF+A+  IE +  K   G L  +SEQ+++DC   +
2178 Sbjct: 82  DFLDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCANFTN 141
2179
2180 Query: 195 GCNGGYP-WSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGA 253
2181             C        + + + + G+     YPY G +   +                V P  E A
2182 Sbjct: 142 PCQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSKMKLRPTYIDVYPNEEWA 201
2183
2184 Query: 254 LLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKVD-HAVAAVGYGPN----YIL 305
2185              + I           +   F  Y+ GI+      CGN  +  ++A VGYG +    Y +
2186 Sbjct: 202 RAH-ITTFGTGYFRMRSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAEKYWI 260
2187
2188 Query: 306 IKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 344
2189            +K S+GT WGE+GY+++ R    +   CG+  S   P+K
2190 Sbjct: 261 VKGSFGTSWGEHGYMKLAR----NVNACGMAESISIPIK 295
2191
2192
2193 >F57F5.1 CE05999   cysteine protease (HINXTON) TR:Q20950
2194            protein_id:CAB00098.1
2195           Length = 400
2196
2197  Score = 91.3 bits (225), Expect = 8e-19
2198  Identities = 84/315 (26%), Positives = 127/315 (39%), Gaps = 72/315 (22%)
2199
2200 Query: 79  IDETNKKNNSYWLGLNVFADMSNDEFKEKYTGS----IAGNYTTTELSYEEVLNDGDVNI 134
2201            +D  NK   S+   L  +     D  K++  G+    I   Y   E+++ EV    D  +
2202 Sbjct: 90  VDYVNKVQTSFKAELGSYFSSYPDTIKKQLMGAKMVEIPEEYRVFEMTHPEV---EDAAV 146
2203
2204 Query: 135 PEYVD----WRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTG--NLNEYSEQELLD 188
2205            P+  D    W    +++ +++Q SCGSCWA SA  TI   I I +    +   S  ++
2206 Sbjct: 147 PDSFDSRTAWPNCPSISKIRDQSSCGSCWAVSAAETISDRICIASNAKTILSISADDINA 206
2207
2208 Query: 189 CDRR--SYGCNGGYPWSALQLVAQ---------------------------YGIHYR--- 216
2209            C       GCNGGYP  A +   +                            G HY+
2210 Sbjct: 207 CCGMVCGNGCNGGYPIEAWRHYVKKGYVTGGSYQDKTGCKPYPYPPCEHHVNGTHYKPCP 266
2211
2212 Query: 217 -NTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLE------- 268
2213             N YP +  +R C++     Y          Q  + G   Y+++ +   +  E
2214 Sbjct: 267 SNMYPTDKCERSCQAGYALTYQ---------QDLHFGQSAYAVSKKAAEIQKEIMTHGPV 317
2215
2216 Query: 269 ----AAGKDFQLYRGGIFVGPCGNKV-DHAVAAVGYGPN----YILIKNSWGTGWGENGY 319
2217                   +DF+ Y GG++V   G  +  HAV  +G+G +    Y L  NSW   WGENGY
2218 Sbjct: 318 EVAFTVYEDFEHYSGGVYVHTAGASLGGHAVKMLGWGVDNGTPYWLCANSWNEDWGENGY 377
2219
2220 Query: 320 IRIKRGTGNSYGVCG 334
2221             RI RG  N  G+ G
2222 Sbjct: 378 FRIIRGV-NECGIEG 391
2223
2224
2225 >T10H4.12 CE27590  locus:cpr-3 protease (HINXTON) TR:Q9TW93
2226            protein_id:CAB61024.2
2227           Length = 370
2228
2229  Score = 85.9 bits (211), Expect = 3e-17
2230  Identities = 67/233 (28%), Positives = 104/233 (43%), Gaps = 42/233 (18%)
2231
2232 Query: 134 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNE--YSEQELL 187
2233            +P+  D R+K      +  ++NQ +CGSCWAF A   I   + I++    +   S +++L
2234 Sbjct: 92  LPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDIL 151
2235
2236 Query: 188 DCDRRS--YGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRY----------------CR 229
2237             C   +  YGC GGY   AL+  A  G      Y   G   Y                C+
2238 Sbjct: 152 SCCGTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPYSFAPCTKNCPESTTPSCK 211
2239
2240 Query: 230 SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVV--------LEAAGK---DFQLYR 278
2241            +  +  Y  KT+  ++ + Y   A   +       +         +EA+ K   DF  Y+
2242 Sbjct: 212 TTCQSSY--KTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYK 269
2243
2244 Query: 279 GGIFVGPCGNKVD-HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGT 326
2245             G++    G  V  HAV  +G+G     +Y LI NSWGT +GE G+ +I+RGT
2246 Sbjct: 270 SGVYHYTSGKLVGGHAVKIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGT 322
2247
2248
2249 >C52E4.1 CE08943  locus:cpr-1 cathepsin-like cysteine protease (HINXTON)
2250            TR:Q18783 protein_id:CAB01410.1
2251           Length = 340
2252
2253  Score = 85.5 bits (210), Expect = 4e-17
2254  Identities = 73/252 (28%), Positives = 102/252 (39%), Gaps = 36/252 (14%)
2255
2256 Query: 107 KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVT 166
2257            KY  + +     TE   E VL            W +  ++  +++Q +CGSCWAF A
2258 Sbjct: 75  KYAAAHSDEIRATE--QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEM 132
2259
2260 Query: 167 IEGIIKIRTGNLNE--YSEQELLDCDRRSYG--CNGGYPWSALQLVAQYGIHYRNTYPYE 222
2261            I     I T    +   S  +LL C   S G  C GGYP  AL+     G+     Y
2262 Sbjct: 133 ISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGA 192
2263
2264 Query: 223 GVQRY---------------------CRSREKGPYAA-KTDGVRQVQ-PYNEGALLYSI- 258
2265            G + Y                     C+S     YA  K  GV     P N  ++   I
2266 Sbjct: 193 GCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIY 252
2267
2268 Query: 259 ANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD-HAVAAVGYGPN----YILIKNSWGTG 313
2269            AN PV        +DF  Y+ G++    G  +  HA+  +G+G      Y L+ NSWG
2270 Sbjct: 253 ANGPVEAAFSVY-EDFYKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSPYWLVANSWGVN 311
2271
2272 Query: 314 WGENGYIRIKRG 325
2273            WGE+G+ +I RG
2274 Sbjct: 312 WGESGFFKIYRG 323
2275
2276
2277 >F26E4.3 CE17714   cysteine protease (HINXTON) TR:P90850
2278            protein_id:CAB03007.1
2279           Length = 491
2280
2281  Score = 80.5 bits (197), Expect = 1e-15
2282  Identities = 66/233 (28%), Positives = 98/233 (41%), Gaps = 42/233 (18%)
2283
2284 Query: 134 IPEYVDWRQKGA--VTPVKNQGSCGSCWAFSAV-VTIEGIIKIRTGNLNE-YSEQELLDC 189
2285            +PE+ D R K    + PV +QG CGS W+ S   ++ + +  I  G +N   S Q+LL C
2286 Sbjct: 223 LPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSC 282
2287
2288 Query: 190 DR-RSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRY-------------------CR 229
2289            ++ R  GC GGY   A   + + G+   + YPY   Q                     C
2290 Sbjct: 283 NQHRQKGCEGGYLDRAWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRCP 342
2291
2292 Query: 230 SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFV------ 283
2293            S  +   A K     +V    E      + N PV        +DF +Y GG++
2294 Sbjct: 343 SGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATF-VVHEDFFMYAGGVYQHSDLAA 401
2295
2296 Query: 284 ---GPCGNKVDHAVAAVGYGPN--------YILIKNSWGTGWGENGYIRIKRG 325
2297                    +  H+V  +G+G +        Y L  NSWGT WGE+GY ++ RG
2298 Sbjct: 402 QKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG 454
2299
2300
2301 >W07B8.4 CE14680   thiol protease (ST.LOUIS) TR:O16288 protein_id:AAB65345.1
2302           Length = 335
2303
2304  Score = 78.2 bits (191), Expect = 7e-15
2305  Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 60/260 (23%)
2306
2307 Query: 133 NIPEYVD----WRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRT-GNLNE-YSEQEL 186
2308            +IP+  D    W Q  +V  +++Q  CGSCWA +A   I     I + G++N   S +++
2309 Sbjct: 72  SIPDSYDVRDHWPQCISVNNIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDI 131
2310
2311 Query: 187 LDCDRRSY----GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDG 242
2312            L C    +    GC GGYP  A +   + G+    ++     Q  C+     P     DG
2313 Sbjct: 132 LTCCTGKFNCGDGCEGGYPIQAWRYWVKNGLVTGGSFE---SQYGCKPYSIAPCGETIDG 188
2314
2315 Query: 243 VRQVQ-----------------------PYNE----GALLYSIANQPVSVVLEAAG---- 271
2316            V   +                       PY++    GA  Y+I      +  E
2317 Sbjct: 189 VTWPECPMKISDTPKCEHHCTGNNSYPIPYDQDKHFGASAYAIGRSAKQIQTEILAHGPV 248
2318
2319 Query: 272 -------KDFQLYRGGIFVGPCGNKV-DHAVAAVGYGPN----YILIKNSWGTGWGENGY 319
2320                   +DF LY+ GI+    G ++  HAV  +G+G +    Y L  NSW T WGE GY
2321 Sbjct: 249 EVGFIVYEDFYLYKTGIYTHVAGGELGGHAVKMLGWGVDNGTPYWLAANSWNTVWGEKGY 308
2322
2323 Query: 320 IRIKRGTGNSYGVCGLYTSS 339
2324             RI RG       CG+ +++
2325 Sbjct: 309 FRILRGVDE----CGIESAA 324
2326
2327
2328 >C32B5.7 CE08515   cathepsin-like peptidase (ST.LOUIS) TR:P91111
2329            protein_id:AAB37963.1
2330           Length = 250
2331
2332  Score = 73.9 bits (180), Expect = 1e-13
2333  Identities = 57/189 (30%), Positives = 87/189 (45%), Gaps = 22/189 (11%)
2334
2335 Query: 137 YVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGC 196
2336            ++DWR +G V PVK+QG+C + +AF+A+  IE +  I  G L  +SEQ+++DC     GC
2337 Sbjct: 71  FLDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC---LGGC 127
2338
2339 Query: 197 N-GGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPY---NEG 252
2340                 P  A+  + + GI     YP+ G     +  EK  Y +K   +     Y   +E
2341 Sbjct: 128 AIESDPMMAMTYLERKGIETYTDYPFVG-----KKNEKCEYDSKKAYLILDDTYDMSDES 182
2342
2343 Query: 253 ALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPC-----GNKVDHAVAAVGY----GPNY 303
2344              L  I  +   +        F  Y+ GI+  P            A+  VGY    G NY
2345 Sbjct: 183 LALVFIDERGPGLFTMNTPPSFFNYKSGIY-NPTEEECKSTNEKRALTIVGYGNDKGQNY 241
2346
2347 Query: 304 ILIKNSWGT 312
2348             ++K S+GT
2349 Sbjct: 242 WIVKGSFGT 250
2350
2351
2352 >Y71H2AM.3 CE26272    (ST.LOUIS) protein_id:AAK29976.1
2353           Length = 716
2354
2355  Score = 71.2 bits (173), Expect = 9e-13
2356  Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
2357
2358 Query: 136 EYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDCDRRSY 194
2359            E++DWR KG V PVK+QG C +  AF+   +IE +  K   G+L  +SEQ+L+DCD   +
2360 Sbjct: 84  EFLDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDCDDHGF 143
2361
2362 Query: 195 -GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPY 249
2363             GC      +A+     +GI     YPY G       +E G  + +T G   V  Y
2364 Sbjct: 144 KGCEEQPAINAVSYFIFHGIETEADYPYAG-------KENGKLSNETQGKELVTNY 192
2365
2366
2367 >F32B5.8 CE09855   cysteine proteinase (ST.LOUIS) TR:O01850
2368            protein_id:AAB54210.1
2369           Length = 427
2370
2371  Score = 69.7 bits (169), Expect = 2e-12
2372  Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 28/217 (12%)
2373
2374 Query: 133 NIPEYVDWRQKGAVTPV---KNQGS---CGSCWAFSAVVTIEGIIKIRTGNL---NEYSE 183
2375            ++P+  DWR    +      +NQ     CGSCWAF A   +   I I+  N       S
2376 Sbjct: 185 DLPKTWDWRDANGINYASADRNQHIPQYCGSCWAFGATSALADRINIKRKNAWPQAYLSV 244
2377
2378 Query: 184 QELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYC----RSREKGP---Y 236
2379            QE++DC        GG P    +   ++GI +     Y+     C    R     P   +
2380 Sbjct: 245 QEVIDCSGAGTCVMGGEPGGVYKYAHEHGIPHETCNNYQARDGKCDPYNRCGSCWPGECF 304
2381
2382 Query: 237 AAKTDGVRQVQPYN-----EGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 291
2383            + K   + +V  Y      E          P++  + AA K F+ Y GGI+       +D
2384 Sbjct: 305 SIKNYTLYKVSEYGTVHGYEKMKAEIYHKGPIACGI-AATKAFETYAGGIYKEVTDEDID 363
2385
2386 Query: 292 HAVAAVGYGPN------YILIKNSWGTGWGENGYIRI 322
2387            H ++  G+G +      Y + +NSWG  WGE+G+ +I
2388 Sbjct: 364 HIISVHGWGVDHESGVEYWIGRNSWGEPWGEHGWFKI 400
2389
2390
2391   Database: /data_2/jason/blastdb/wormpep62
2392     Posted date:  Sep 3, 2001  2:17 PM
2393   Number of letters in database: 8,813,425
2394   Number of sequences in database:  20,085
2395
2396 Lambda     K      H
2397    0.318    0.138    0.428
2398
2399 Gapped
2400 Lambda     K      H
2401    0.267   0.0410    0.140
2402
2403
2404 Matrix: BLOSUM62
2405 Gap Penalties: Existence: 11, Extension: 1
2406 Number of Hits to DB: 6611257
2407 Number of Sequences: 20085
2408 Number of extensions: 311359
2409 Number of successful extensions: 788
2410 Number of sequences better than 1.0e-10: 19
2411 Number of HSP's better than  0.0 without gapping: 6
2412 Number of HSP's successfully gapped in prelim test: 13
2413 Number of HSP's that attempted gapping in prelim test: 741
2414 Number of HSP's gapped (non-prelim): 23
2415 length of query: 345
2416 length of database: 8,813,425
2417 effective HSP length: 44
2418 effective length of query: 301
2419 effective length of database: 7,929,685
2420 effective search space: 2386835185
2421 effective search space used: 2386835185
2422 T: 11
2423 A: 40
2424 X1: 16 ( 7.3 bits)
2425 X2: 38 (14.6 bits)
2426 X3: 64 (24.7 bits)
2427 S1: 41 (21.7 bits)
2428 S2: 156 (64.7 bits)