t/data/U83300.bsml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <?format DECIMAL="."?>
   3 <!DOCTYPE Bsml PUBLIC "-//EBI//Labbook, Inc. BSML DTD//EN" "http://www.ebi.ac.uk/xembl/dtd/BSML2_2.DTD">
   4 <!-- The BSML specification was created by Joseph H. Spitzner, Ph.D., LabBook, Inc. http://www.labbook.com -->
   5
   6 <Bsml>
   7  <Definitions>
   8   <Sequences>
   9    <Sequence id="MIVN83300" ic-acckey="U83300" title="MIVN83300" comment="Veniliornis nigriceps strain LSU1305 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds. " length="946" topology="linear" molecule="dna">
  10     <Attribute name="version" content="U83300.1" />
  11     <Attribute name="organism-species" content="Veniliornis nigriceps (bar-bellied woodpecker)" />
  12     <Attribute name="organism-classification" content="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Aves; Neognathae; Piciformes; Picidae; Veniliornis" />
  13     <Attribute name="source" content="Veniliornis nigriceps LSU1305" />
  14     <Attribute name="date-created" content="14-MAY-1997" />
  15     <Attribute name="date-last-updated" content="4-MAR-2000" />
  16     <Attribute name="database-xref" content="UniProt/TrEMBL:O03345" />
  17     <Attribute name="database-xref" content="GOA:O03345" />
  18     <Feature-tables>
  19      <Feature-table>
  20       <Reference>
  21        <RefAuthors>Moore W.S., DeFilippis V.R.</RefAuthors>
  22        <RefTitle>The window of taxonomic resolution for phylogenies based on mitochondrial cytochrome b</RefTitle>
  23        <RefJournal>(in) Mindell D.R. (eds.). AVIAN MOLECULAR EVOLUTION AND SYSTEMATICS:81-116. Academic Press, Inc., San Diego, CA, USA (1997)</RefJournal>
  24       </Reference>
  25       <Reference>
  26        <RefAuthors>Moore W.S., DeFilippis V.R.</RefAuthors>
  27        <RefJournal>Submitted (27-DEC-1996) to the EMBL/GenBank/DDBJ databases. Biological Sciences, Wayne State University, Biological Sciences Building, Detroit, MI 48202, USA</RefJournal>
  28       </Reference>
  29       <Feature id="FTR_U83300.1_0" class="SOURCE" value-type="source" title="source" display-auto="1">
  30        <Qualifier value-type="strain" value="LSU1305" />
  31        <Qualifier value-type="organelle" value="mitochondrion" />
  32        <Qualifier value-type="organism" value="Veniliornis nigriceps" />
  33        <Qualifier value-type="db_xref" value="TAXONOMY:56076" />
  34        <Interval-loc startpos="1" endpos="946" />
  35       </Feature>
  36       <Feature id="FTR_U83300.1_1" class="CDS" value-type="cds" title="CDS" display-auto="1">
  37        <Qualifier value-type="product" value="cytochrome b" />
  38        <Qualifier value-type="codon_start" value="1" />
  39        <Qualifier value-type="translation" value="XFGSLLGICLMTQIVTGLLLATHYTADTTLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLFKETWNTGVILLLTLMATAFVGYVLPWGQMSSWGATVITNLFSALPYVGQTIVEWAWGGFSVDNPTLTRFFXLHFLLPFLIXGLTLIHFTFLHESGSNNPLGIVSDXDKIPFXPYFSXKDILGFMFMLLPLVXLALFSPNLLGDXENXTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHTSKQRTMAFRPFSQLLFWMLVANLLILTWIGXQPXEHP" />
  40        <Qualifier value-type="db_xref" value="GOA:O03345" />
  41        <Qualifier value-type="db_xref" value="UniProt/TrEMBL:O03345" />
  42        <Qualifier value-type="db_xref" value="PID:AAB53618.1" />
  43        <Interval-loc startpos="1" endpos="946" startopen="1" endopen="1" />
  44       </Feature>
  45      </Feature-table>
  46     </Feature-tables>
  47     <Seq-data>aantttggatctctcctaggcatttgcctaataacacaaattgtcacagg
  48 cctcctgcttgccacccactacactgccgacacaaccctagccttttctt
  49 ccgtcgcccatacatgccgcaacgttcaatacggctgactaatccgtaac
  50 ctccatgccaacggggcctcattctttttcatctgcatctacttacacat
  51 cggacgtggattctactacggatcctacttatttaaagaaacttgaaaca
  52 cgggagtcatccttctcctcaccctcatagccaccgccttcgtcggctac
  53 gtcctcccctgaggacaaatatcatcctgaggagcaaccgttattacaaa
  54 tttattctcagccctcccctacgtaggacaaactatcgtcgaatgagcct
  55 gaggaggattctctgtagacaaccccactctcacccgattcttcgnccta
  56 cactttctcctcccattcttaattgnaggactcaccctaattcacttcac
  57 tttcctccacgaatccggntcgaacaatcccctcggaatcgtatccgaca
  58 gngataaaatcccctttcanccctacttctccntaaaagatatcctagga
  59 ttcatattcatactcctccccctcgtnnccctagcnctattctcacctaa
  60 cctcctaggagaccnggaaaatttnacgcccgcaaaccccctagtnacac
  61 ccccccacatcaaaccagaatggtacttcctatttgcatatgctatccta
  62 cgctcaatccccaataaactaggaggagtcctagccctagctgcctcagt
  63 cctaattctattcctagcccccctccttcatacatccaaacaacgcacga
  64 tagccttccgacccttttcccaactcctattctgaatactagtcgccaac
  65 ctcctcatcctcacctgaatcggnagncaaccagnagaacatccct
  66 </Seq-data>
  67    </Sequence>
  68   </Sequences>
  69  </Definitions>
  70 </Bsml>