Bring base classes from BioPerl-run back to BioPerl.
[bioperl-live.git] / t / data / X98338_Adh-mRNA.gb
blob636c5da8a8a5b43a63c06e73b4de7ba7dcb0d56a
1 LOCUS       DMALCDEHP               2071 bp    mRNA    linear   INV 06-JAN-1997
2 DEFINITION  D.melanogaster mRNA for alcohol dehydrogenase related protein.
3 ACCESSION   X98338
4 VERSION     X98338.1  GI:1752657
5 KEYWORDS    ADH protein; ADHR protein.
6 SOURCE      Drosophila melanogaster (fruit fly)
7   ORGANISM  Drosophila melanogaster
8             Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
9             Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha;
10             Ephydroidea; Drosophilidae; Drosophila.
11 REFERENCE   1
12   AUTHORS   Brogna,S. and Ashburner,M.
13   TITLE     The Adh-related gene of Drosophila melangaster is expressed via a
14             functional dicistronic messenger: multigenic transcription in
15             higher organisms
16   JOURNAL   Unpublished
17 REFERENCE   2  (bases 1 to 2071)
18   AUTHORS   Brogna,S.
19   TITLE     Direct Submission
20   JOURNAL   Submitted (05-JUN-1996) S. Brogna, University of Cambridge,
21             Genetics, Downing Street, Cambridge, CB2 3EH, UK
22 FEATURES             Location/Qualifiers
23      source          1..2071
24                      /organism="Drosophila melanogaster"
25                      /mol_type="mRNA"
26                      /strain="Canton-S"
27                      /db_xref="taxon:7227"
28                      /dev_stage="adult"
29      gene            125..895
30                      /gene="ADH"
31      CDS             125..895
32                      /gene="ADH"
33                      /codon_start=1
34                      /product="alcohol dehydrogenase protein"
35                      /protein_id="CAA66981.1"
36                      /db_xref="GI:1752658"
37                      /db_xref="FLYBASE:FBgn0000055"
38                      /db_xref="SWISS-PROT:P00334"
39                      /translation="MSFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENP
40                      AAIAELKAINPKVTVTFYPYDVTVPIAETTKLLKTIFAQLKTVDVLINGAGILDDHQI
41                      ERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQVPVYSGTKAAV
42                      VNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLDVEPQVAEKLLAHPTQPSLA
43                      CAENFVKAIELNQNGAIWKLDLGTLEAIQWTKHWDSGI"
44      polyA_signal    1017..1022
45      polyA_site      1066
46      gene            1194..2012
47                      /gene="ADHR"
48      CDS             1194..2012
49                      /gene="ADHR"
50                      /codon_start=1
51                      /product="alcohol dehydrogenase related protein"
52                      /protein_id="CAA66982.1"
53                      /db_xref="GI:1752659"
54                      /db_xref="FLYBASE:FBgn0000056"
55                      /db_xref="SWISS-PROT:P91615"
56                      /translation="MFDLTGKHVCYVADCGGIALETSKVLMTKNIAKLAILQSTENPQ
57                      AIAQLQSIKPSTQIFFWTYDVTMAREDMKKYFDEVMVQMDYIDVLINGATLCDENNID
58                      ATINTNLTGMMNTVATVLPYMDRKMGGTGGLIVNVTSVIGLDPSPVFCAYSASKFGVI
59                      GFTRSLADPLYYSQNGVAVMAVCCGPTRVFVDRELKAFLEYGQSFADRLRRAPCQSTS
60                      VCGQNIVNAIERSENGQIWIADKGGLELVKLHWYWHMADQFVHYMQSNDEEDQD"
61      polyA_signal    2023..2028
62      polyA_site      2071
63 BASE COUNT      581 a    504 c    511 g    475 t
64 ORIGIN      
65         1 attattgtct cagtgcagtt gtcagttgca gttcagcaga cgggctaacg agtacttgca
66        61 tctcttcaaa tttacttaat tgatcaatat cgaaagagcc tgctaaagca aaaaagaagt
67       121 caccatgtcg tttactttga ccaacaagaa cgtgattttc gttgccggtc tgggaggcat
68       181 tggtctggac accagcaagg agctgctcaa gcgcgatctg aagaacctgg tgatcctcga
69       241 ccgcattgag aacccggctg ccattgccga gctgaaggca atcaatccaa aggtgaccgt
70       301 caccttctac ccctatgatg tgaccgtgcc cattgccgag accaccaagc tgctgaagac
71       361 catcttcgcc cagctgaaga ccgtcgatgt cctgatcaac ggagctggta tcctggacga
72       421 tcaccagatc gagcgcacca ttgccgtcaa ctacactggc ctggtcaaca ccacgacggc
73       481 cattctggac ttctgggaca agcgcaaggg cggtcccggt ggtatcatct gcaacattgg
74       541 atccgtcact ggattcaatg ccatctacca ggtgcccgtc tactccggca ccaaggccgc
75       601 cgtggtcaac ttcaccagct ccctggcgaa actggccccc attaccggcg tgaccgctta
76       661 caccgtgaac cccggcatca cccgcaccac cctggtgcac aagttcaact cctggttgga
77       721 tgttgagccc caggttgctg agaagctcct ggctcatccc acccagccat cgttggcctg
78       781 cgccgagaac ttcgtcaagg ctatcgaact gaaccagaac ggagccatct ggaaactgga
79       841 cttgggcacc ctggaggcca tccagtggac caagcactgg gactccggca tctaagaagt
80       901 gataatccca aaaaaaaaac ataacattag ttcatagggt tctgcgaacc acaagatatt
81       961 cacgcaaggc aataaggctg attcgatgca cactcacatt cttctcctaa tacgataata
82      1021 aaactttcca tgaaaaatat ggaaaaatat atgaaaattg agaaatccaa aaaactgata
83      1081 aacgctctac ttaattaaaa tagataaatg ggagcggcag gaatggcgga gcatggccaa
84      1141 gttcctccgc caatcagtcg taaaacagaa gtcgtggaaa gcggatagaa agaatgttcg
85      1201 atttgacggg caagcatgtc tgctatgtgg cggattgcgg aggaattgca ctggagacca
86      1261 gcaaggttct catgaccaag aatatagcga aactggccat tttacagagt acggaaaatc
87      1321 cccaggccat cgctcagttg cagtcgataa agccgagtac ccaaatattt ttctggacct
88      1381 acgacgtgac catggcaagg gaagatatga agaagtactt cgatgaggtg atggtccaaa
89      1441 tggactacat cgatgtcctg atcaatggtg ctacgctgtg cgatgaaaat aacattgatg
90      1501 ccaccatcaa tacaaatcta acgggaatga tgaacactgt ggccacagtg ttaccctata
91      1561 tggacagaaa aatgggagga actggtgggc taattgtgaa cgtcacttcg gtcattggat
92      1621 tggacccttc gccggttttc tgcgcatata gtgcatccaa attcggtgta attggattca
93      1681 ccagaagtct agcggacccc ctttactatt cccaaaacgg ggtagctgtg atggcggttt
94      1741 gttgtggtcc tacaagggtc tttgtggacc gggaactgaa agcgtttttg gaatacggac
95      1801 aatcctttgc cgatcgcctg cggcgagcgc cctgccaatc gacatcggtt tgtggtcaga
96      1861 atattgtcaa tgccatcgag agatcggaga atggtcagat atggattgcg gataagggtg
97      1921 gactggagtt ggtcaaattg cattggtact ggcacatggc cgaccagttc gtgcactata
98      1981 tgcagagcaa tgatgaagag gatcaagatt gaattcgaat caaataaaat aatgctttac
99      2041 gcaaaaagta ggcaattcat tttcctatga t