t/data/interpro_ebi.xml

   1 <?xml version="1.0" encoding="ISO-8859-1"?>
   2 <E      BIInterProScanResults xmlns="http://www.ebi.ac.uk/schema"
   3   xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   4   xsi:noNamespaceSchemaLocation="http://www.ebi.ac.uk/schema/InterProScanResult.xsd">
   5   <Header>
   6          <program name="InterProScan" version="4.0"
   7                 citation="PMID:11590104"/>
   8          <parameters>
   9                 <sequences total="1"/>
  10                 <databases total="10">
  11                   <database number="1" name="PRODOM" type="sequences"/>
  12                   <database number="2" name="PRINTS" type="matrix"/>
  13                   <database number="3" name="PIR" type="model"/>
  14                   <database number="4" name="PFAM" type="model"/>
  15                   <database number="5" name="SMART" type="model"/>
  16                   <database number="6" name="TIGRFAMs" type="model"/>
  17                   <database number="7" name="PROSITE" type="strings"/>
  18                   <database number="8" name="SUPERFAMILY" type="model"/>
  19                   <database number="9" name="SIGNALP" type="model"/>
  20                   <database number="10" name="TMHMM" type="model"/>
  21                 </databases>
  22          </parameters>
  23   </Header>
  24
  25   <interpro_matches>
  26
  27          <protein id="Sequence_1" length="85" crc64="E5E52028293ABD62">
  28
  29                 <interpro id="IPR009366" name="Protein of unknown function DUF1021" type="Family">
  30                   <match id="PF06257.1" name="Protein of unknown function (DUF1021)"
  31                          dbname="PFAM">
  32                          <location start="5" end="78" score="3.7e-47" status="T"
  33                                 evidence="HMMPfam"/>
  34                   </match>
  35                 </interpro>
  36
  37                 <interpro id="noIPR" name="unintegrated" type="unintegrated">
  38                   <match id="PD061839" name="Q92F78_LISMO_Q92F78;" dbname="PRODOM">
  39                          <location start="4" end="76" score="2e-36" status="T"
  40                                 evidence="BlastProDom"/>
  41                   </match>
  42                 </interpro>
  43
  44    </protein>
  45
  46   </interpro_matches>
  47 </EBIInterProScanResults>