thesis.tex

   1 %%% For a B5 format, use the following option
   2 \documentclass[10pt,makeidx]{phdthesis}
   3
   4 %%% For an A4 format, use there options instead
   5 %\documentclass[12pt,makeidx]{phdthesis}
   6 %\usepackage{a4wide}
   7
   8 %%% Fonts, uncomment only one option %%%
   9 \usepackage{utopia}
  10 %\usepackage{charter}
  11 %\usepackage{palatino}
  12 %\usepackage{cmbright}  % is computer modern bright for text and specail math fonts!
  13 %\usepackage{newcent}
  14 %\usepackage{fouriernc} % is new century schoolbook for text and fourier font for maths!
  15 %\usepackage{newcent}
  16 %\usepackage{avant}
  17 %\usepackage{pifont}
  18 %\usepackage{mathpple}
  19 %\usepackage{mathptmx}
  20
  21
  22 %%% If you want to use MakeIndex to create automatically
  23 % an index, uncomment these lines
  24 \usepackage{makeidx}     % only with Latex2e
  25 \makeindex
  26
  27 % Other packages
  28 \usepackage{fancyheadings}
  29 \usepackage{amsmath}
  30 \usepackage{amssymb}
  31 \usepackage{epsfig}
  32 \usepackage{subfigure}
  33 \usepackage{graphics}
  34 \usepackage{float}
  35 \usepackage{./Stylefiles/here}
  36 \usepackage[abbr]{harvard}
  37 \usepackage{rotating}
  38 \usepackage{multirow}
  39 \usepackage{comment}
  40 \usepackage{./Stylefiles/captionhack}
  41 \usepackage{epigraph}
  42
  43
  44 \renewcommand{\thesubfigure}{}
  45
  46
  47 % Section and Subsection Title Formatting
  48 %\usepackage{titlesec}
  49 %\titleformat{\section}{\sf\large\bfseries}{\thesection}{1em}{}
  50 %\titleformat{\chapter}{\sf\Large\bfseries}{\thechapter}{1em}{}
  51 %\titleformat{\subsection}{\sf\normal\bfseries}{\thesubsection}{1em}{}
  52
  53 % things for PDF and hyperref
  54
  55 \usepackage[ps2pdf=true,colorlinks]{hyperref}
  56 %\usepackage[figure,table]{hypcap} % Correct a problem with hyperref
  57 \hypersetup{
  58    bookmarksnumbered,
  59    pdfstartview={FitH},
  60    citecolor={black},
  61    linkcolor={black},
  62    urlcolor={black},
  63    pdfpagemode={UseOutlines}
  64 }
  65
  66 \makeatletter
  67 \newcommand\org@hypertarget{}
  68 \let\org@hypertarget\hypertarget
  69 \renewcommand\hypertarget[2]{%
  70 \Hy@raisedlink{\org@hypertarget{#1}{}}#2%
  71 } \makeatother
  72
  73 %%% General page formatting
  74 \renewcommand{\textfraction}{0.01}
  75 \renewcommand{\topfraction}{0.99}
  76 \renewcommand{\floatpagefraction}{0.99}
  77 \renewcommand{\bottomfraction}{0.99}
  78
  79 \newenvironment{Abstract}
  80 {\begin{center}\textbf{Abstract}%
  81  \end{center} \small \it \begin{quote}}
  82 {\end{quote}}
  83
  84
  85 \pdfcompresslevel=3
  86
  87 \typeout{Dissertation}
  88
  89 %%% To compile only one or some chapters, use the following
  90 %   command
  91 %\includeonly{chapter_1,chapter_2,chapter_3,chapter_4,appendix_A}
  92 %\includeonly{thesis_acknowledgements,chapter_3}
  93
  94
  95 %%% Begining of the document
  96 \begin{document}
  97 \pagestyle{fancyplain}
  98 \pagenumbering{roman}
  99
 100
 101 %%% Definition of maths stuff
 102 %    Enclose the argument in vert-bar delimiters:
 103 \newcommand{\envert}[1]{\left|#1\right|}
 104 \let\abs=\envert
 105
 106 %    Enclose the argument in double-vert-bar delimiters:
 107 \newcommand{\enVert}[1]{\left\|#1\right\|}
 108 \let\norm=\enVert
 109
 110 %    Commands used in this document:
 111 \newcommand{\diff}{\mathrm{d}}
 112 \def\i{\mathrm{i}}
 113 \def\j{\mathrm{j}}
 114 \def\e{\mathrm{e}}
 115 % \newcommand{\dfrac}[2]{\displaystyle\frac{#1}{#2}}
 116 \let\epsilon=\varepsilon
 117 \newcommand{\la}{\langle}
 118 \newcommand{\ra}{\rangle}
 119
 120 \newcommand{\Emax}{\ensuremath{E_{\mathrm{max}}}}
 121 \newcommand{\me}{m_{\mathrm{e}}}
 122 \newcommand{\mx}{m_{\mathrm{x}}}
 123 \newcommand{\NAv}{N_{\mathrm{Av}}}
 124
 125 %    Make sure to use an upright Delta for the Laplace operator:
 126 \ifx\upDelta\undefined\let\Laplace=\Delta\else\let\Laplace=\upDelta\fi
 127
 128 %    Use hbar in place of hslash, of the latter is not available:
 129 \ifx\hslash\undefined\let\hslash=\hbar\fi
 130
 131
 132
 133 %%%  \include the `front matter'
 134 \include{./Thesis.Cover/cover}
 135 \include{thesis_front}
 136 \include{thesis_dedication}
 137
 138 %% create the table of contents
 139 \cleardoublepage
 140 \lhead[]{\fancyplain{}{\rightmark}}
 141 \chead[\fancyplain{}{}]{\fancyplain{}{}}
 142 \rhead[\fancyplain{}{\leftmark}]{\fancyplain{}{}}
 143 %\rhead[\fancyplain{}{}]{\fancyplain{}{}}
 144 %\lhead[\fancyplain{}{}]{\fancyplain{}{}}
 145 \pdfbookmark[0]{Contents}{contents} % Sets a PDF bookmark for the contents page
 146 \tableofcontents
 147
 148 %%  add the acknowledgements to the table of contents
 149 \cleardoublepage
 150 \addcontentsline{toc}{chapter}{Acknowledgements}
 151 \include{./Acknowledgments/Thesis.Acknowledgements}
 152
 153 \cleardoublepage
 154
 155 %%% Customisation of the header and footer for the chapters
 156 %\pagestyle{headings}
 157 %------------------------------
 158 \newcommand{\publ}{}
 159
 160 \pagestyle{fancyplain}
 161 \setlength{\headrulewidth}{0.3pt}
 162 \setlength{\footrulewidth}{0.0pt}
 163 \setlength{\plainfootrulewidth}{0.0pt}
 164 \setlength{\plainheadrulewidth}{0pt}
 165 \renewcommand{\sectionmark}[1]{\markright{\it \thesection.\ #1}}
 166 \renewcommand{\chaptermark}[1]{\markboth{
 167        \it \thechapter.\ #1}{}}
 168 \lhead[\thepage]{\fancyplain{\publ}{\rightmark}}
 169 \chead[\fancyplain{}{}]{\fancyplain{}{}}
 170 \rhead[\fancyplain{}{\leftmark}]{\fancyplain{}{\thepage}}
 171 \lfoot[]{}
 172 \cfoot[]{}
 173 \rfoot[]{}
 174 %------------------------------
 175
 176
 177 %%  include the LaTeX files containing the text for each chapters
 178 %   create the appendix and include it
 179 \pagenumbering{arabic}
 180 %\include{./General.Theory/DFT/DFT.Introduction}
 181 \include{./Ag.Cu-System/Introduction/Ag.Cu.Introduction}
 182 \appendix
 183 %\include{appendix_A}
 184
 185 %% include the bibliography
 186 \renewcommand{\publ}{}
 187 \cleardoublepage
 188 \small
 189 \addcontentsline{toc}{chapter}{Bibliography}
 190 \bibliography{./Bibliography/Full_Library.bib}
 191
 192 %%%  options for the bibliography style
 193
 194 \bibliographystyle{plain}
 195 %\bibliographystyle{newagsm}
 196 %\bibliographystyle{mykluwer}
 197 %\bibliographystyle{IEEE}
 198
 199 % include the index
 200 \cleardoublepage
 201 \addcontentsline{toc}{chapter}{Index}
 202 \printindex
 203
 204 \end{document}