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Markdownify the Cview readme
2011-08-03
J
o
n
a
than "Duke"
.
.
.
Mark
d
owni
f
y the Cview r
e
a
d
me
commit
|
commitdiff
|
tree
2011-05-11
J
onathan "
D
uk
e
"
.
.
.
Fail early i
n
CXGN::
C
vie
w
::
M
a
p
:
:
SGN::Contig if
we fail
.
.
.
commit
|
commitdiff
|
tree
2011-05-04
Jonat
h
an
"
D
u
ke"
.
.
.
Squash warnings
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Duke"
.
.
.
Pre
v
ent a d
i
vision by ze
r
o err
o
r
commit
|
commitdiff
|
tree
2011-05-03
Jo
n
atha
n
"
D
u
k
e"
.
.
.
Use the ||= o
p
e
r
ator correctly
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "Duke"
.
.
.
S
q
uash
a warning
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "Duke"
.
.
.
G
et ri
d
of a wa
r
nin
g
that is spamming o
u
r test outpu
t
commit
|
commitdiff
|
tree
2011-05-03
J
o
n
ath
a
n
"Duke"
.
.
.
C
lean
up CXGN::
C
view::ChromosomeV
i
ewer POD
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "Du
k
e"
.
.
.
Perl
t
idy CXGN:
:
View::Chro
m
o
s
omeViewer
commit
|
commitdiff
|
tree
2011-05-03
Jon
a
than "Duk
e
"
.
.
.
Ign
o
re Modu
l
e::Build
d
e
tr
i
tus
commit
|
commitdiff
|
tree
2011-05-03
J
o
nathan
"
Duke"
.
.
.
Prevent u
n
initi
a
lized warnings
b
y skip
p
i
n
g unless
t
h
e
.
.
.
commit
|
commitdiff
|
tree
2011-05-03
Jo
n
at
h
an "
D
uke"
.
.
.
Perltid
y
C
XGN::
C
view
:
:
Map:
:
SGN::Imag
e
commit
|
commitdiff
|
tree
2011-01-28
Jonathan "Duk
e
"
.
.
.
Get rid of some w
a
rni
n
gs in
CXGN::Cview::Map::SGN::AGP
commit
|
commitdiff
|
tree
2011-01-28
J
o
n
a
t
h
a
n "Duke"
.
.
.
P
e
rltidy on
CXGN::Cview::Map::SG
N
::AGP
commit
|
commitdiff
|
tree
2011-01-28
J
o
nathan "
D
u
k
e"
.
.
.
Get rid
of
a
wa
r
ning i
n
C
XGN::Cv
i
e
w
::Map::S
G
N::I
T
A
G
commit
|
commitdiff
|
tree
2011-01-28
J
onathan "Duke"
.
.
.
Pe
r
lti
d
y CXG
N
::Cview::Map::SGN::IT
A
G
commit
|
commitdiff
|
tree
2010-09-29
J
onathan "Duke"
.
.
.
Get rid of reference
to CXGN:
:
VHost in POD and
80-columnize
commit
|
commitdiff
|
tree
2010-09-17
Jo
n
athan "
D
uke"
.
.
.
Squash
n
o
i
sy output from Pac
h
yteneIdiogram
commit
|
commitdiff
|
tree
2010-08-31
Jonathan "Duke"
.
.
.
Refactor CXGN::C
v
iew:
:
MapImag
e
and
fix bug in Proj
e
ctSta
t
s
commit
|
commitdiff
|
tree
2010-08-27
J
ona
t
h
an "Duke"
.
.
.
R
emove VHost from Build
.
PL
commit
|
commitdiff
|
tree
2010-08-27
Jonathan "Duke"
.
.
.
Use CXGN::
C
v
i
ew::Config in b
i
n/re
-
generate-overview
.
pl
commit
|
commitdiff
|
tree
2010-08-27
Jonathan "Du
k
e"
.
.
.
Make Cvie
w
code u
s
e CXGN::Cview:
:
Config
commit
|
commitdiff
|
tree
2010-08-27
J
onath
a
n "Du
k
e"
.
.
.
Rem
o
ve
c
opied mo
d
ule
commit
|
commitdiff
|
tree
2010-08-27
J
onath
a
n
"
D
u
k
e"
.
.
.
Perltid
y
on some
C
XGN::Cview
c
ode
commit
|
commitdiff
|
tree
2010-08-26
Jonathan
"
D
u
k
e"
.
.
.
Refact
o
r thi
n
gs to u
s
e Cataly
s
tX::Gl
o
b
a
lContext
commit
|
commitdiff
|
tree
2010-08-26
Jonat
h
an "Du
k
e"
.
.
.
Remove CXG
N
::VH
o
st from CXGN:
:
CView
:
:Cvie
w
_d
a
ta_adapter
commit
|
commitdiff
|
tree
2010-08-12
Jonathan "Duke"
.
.
.
Perl dependency
should be
5
.
10
.
0 instea
d
of 5
.
10
commit
|
commitdiff
|
tree
2010-08-05
J
onathan "Duke"
.
.
.
Bu
m
p
our minimum Perl version to 5
.
10 ::rejoic
e
s::
commit
|
commitdiff
|
tree
2010-07-14
Du
k
e Leto
Get rid of w
a
rni
n
gs in CXGN::Cvi
e
w::Map::SGN::Genetic
commit
|
commitdiff
|
tree
2010-07-07
Duke
L
et
o
Get rid
of varia
b
le warnings i
n
CXGN:
:
C
view::Ch
r
Marke
r
Image
commit
|
commitdiff
|
tree
2010-06-18
D
u
ke
L
e
to
Refa
c
to
r
t/M
a
p/map
.
t
commit
|
commitdiff
|
tree
2010-06-18
Duke L
e
to
Refacto
r
an
d
get r
i
d
of warni
n
gs
in CXGN::Cview::Mar
k
er
commit
|
commitdiff
|
tree
2010-06-18
Duke Leto
G
et rid of so
m
e warnings in
CXGN::Cview::Ch
r
o
m
osome
.
.
.
commit
|
commitdiff
|
tree
2010-06-18
Du
k
e
Leto
Add
blib/* t
o
.
g
i
tignore
commit
|
commitdiff
|
tree
2010-06-18
Duke
Leto
Refactor t/C
h
rom
o
some
/
v
ector
.
t and give it
a
pla
n
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Clean
u
p CXGN::Cvi
e
w::Map:
:
SGN::* a bit
commit
|
commitdiff
|
tree
2010-06-16
D
u
ke L
e
to
Cl
e
an up
C
XG
N
::C
v
iew::Map::SGN::Cont
i
g and get rid
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Duke
Let
o
Clean up CXGN::Cview::Map::SGN::Cont
i
g and g
e
t rid
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
D
u
ke
L
e
to
Clean
u
p
C
X
GN
:
:Cview::Map::SGN::Con
t
ig an
d
ge
t
ri
d
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Duk
e
Leto
Cleanup CXGN::Cview::Map::
S
GN::Cont
i
g and get rid of
.
.
.
commit
|
commitdiff
|
tree
2010-06-11
Duk
e
Leto
Conver
t
2
-arg open to
3
-arg
commit
|
commitdiff
|
tree
2010-05-25
Duke Leto
Mak
e
B
uil
d
.
PL less complainy
commit
|
commitdiff
|
tree