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2012-10-02	Lukas Mueller	fix typo that caused crash.	commit \| commitdiff \| tree
2012-09-29	Lukas Mueller	code cleanup.	commit \| commitdiff \| tree
2012-09-29	Lukas Mueller	fix parameters for MapFactory object.	commit \| commitdiff \| tree
2012-09-27	Lukas Mueller	fix map comparison tool crash.	commit \| commitdiff \| tree
2012-06-15	Lukas Mueller	remove output to STDERR.	commit \| commitdiff \| tree
2012-06-11	Lukas Mueller	add map factory object for cassavabase.	commit \| commitdiff \| tree
2012-06-11	Lukas Mueller	don't fail when AGP maps cannot be created.	commit \| commitdiff \| tree
2012-06-11	Lukas Mueller	fix selection of the db backend.	commit \| commitdiff \| tree
2012-06-11	Lukas Mueller	add accessor for the default map.	commit \| commitdiff \| tree
2011-12-21	mueller	remove manuals from old location.	commit \| commitdiff \| tree
2011-12-21	mueller	fix AGP map and upgrade to new, WGS-based AGPs.	commit \| commitdiff \| tree
2011-12-21	mueller	minor pod addition.	commit \| commitdiff \| tree
2011-12-21	mueller	add AGP chromosome class to this repo.	commit \| commitdiff \| tree
2011-12-21	mueller	fix pachytene file location and uncomment agp file...	commit \| commitdiff \| tree
2011-11-11	mueller	add accessors for map parent stocks.	commit \| commitdiff \| tree
2011-10-31	mueller	remove reference to deprecated parent_1 slot in sgn...	commit \| commitdiff \| tree
2011-04-08	mueller	Populate abstract from database for this map.	commit \| commitdiff \| tree
2011-03-21	mueller	making behavior of overview more forgiving	commit \| commitdiff \| tree
2011-03-21	mueller	removing the outdated ITAG map.	commit \| commitdiff \| tree
2011-03-21	mueller	changed a die to a warn	commit \| commitdiff \| tree
2011-03-21	mueller	making behavior more forgiving if datasets are not...	commit \| commitdiff \| tree
2011-03-21	mueller	preventing division by zero errors	commit \| commitdiff \| tree
2011-03-20	mueller	adding the new image-based map and genotype (for the...	commit \| commitdiff \| tree
2011-03-20	mueller	cleanup stderr.	commit \| commitdiff \| tree
2011-03-20	mueller	cleanup stderr	commit \| commitdiff \| tree
2011-03-20	mueller	remove stderr output	commit \| commitdiff \| tree
2011-03-20	mueller	Adding a new map type, Genotype, that replaces the...	commit \| commitdiff \| tree
2011-03-20	mueller	Adding QTL maps to the map factory.	commit \| commitdiff \| tree
2011-03-20	mueller	minor changes to the stat output	commit \| commitdiff \| tree
2011-03-20	mueller	adding the pachytene and qtl maps.	commit \| commitdiff \| tree
2011-03-20	mueller	removing units from map	commit \| commitdiff \| tree
2011-03-20	mueller	a first version of a working QTL map object.	commit \| commitdiff \| tree
2011-03-20	mueller	Fixing more warnings.	commit \| commitdiff \| tree
2011-03-20	mueller	Squashing warnings	commit \| commitdiff \| tree
2011-03-20	mueller	Squashing lots of warnings.	commit \| commitdiff \| tree
2011-03-20	mueller	minor edits	commit \| commitdiff \| tree
2011-03-20	mueller	Making the physical markers work well on both sides...	commit \| commitdiff \| tree
2011-03-20	mueller	Making the physical label work well on both sides of...	commit \| commitdiff \| tree
2011-03-20	mueller	adding a fill_color property to image objects.	commit \| commitdiff \| tree
2011-03-20	mueller	QTL map components - initial commit.	commit \| commitdiff \| tree
2011-03-20	mueller	A new map type, consisting of images, such as pachytene...	commit \| commitdiff \| tree
2011-02-15	mueller	Fixing an issue with the display of the map units	commit \| commitdiff \| tree
2010-09-24	mueller	adding a new map definition for Individual	commit \| commitdiff \| tree
2010-09-24	mueller	fixing mapoverviews for the individual page	commit \| commitdiff \| tree
2010-09-24	mueller	trying to fix a conflict.	commit \| commitdiff \| tree
2010-09-24	mueller	removed use of deprecated CXGN::VHost class	commit \| commitdiff \| tree
2010-08-06	mueller	adding missing class in use statement	commit \| commitdiff \| tree
2010-08-06	mueller	removed stdout output	commit \| commitdiff \| tree
2010-08-06	mueller	the overlay form should not be shown on Physical and...	commit \| commitdiff \| tree
2010-08-05	mueller	completing the map overlay functionality	commit \| commitdiff \| tree
2010-08-05	mueller	removed some commented out code.	commit \| commitdiff \| tree
2010-07-27	mueller	added POD.	commit \| commitdiff \| tree
2010-07-27	mueller	* changing the way the common names for the maps are...	commit \| commitdiff \| tree
2010-07-21	mueller	changes to the parameters of map overview constructors	commit \| commitdiff \| tree
2010-07-06	mueller	renaming packages to CamelCase; updating to coding...	commit \| commitdiff \| tree
2010-07-06	mueller	refactoring Map_overview to not use VHost, how it manages...	commit \| commitdiff \| tree
2010-06-27	mueller	making this test pass... Arabidopsis has only 5 chromosomes.	commit \| commitdiff \| tree
2010-05-13	Lukas Mueller	changed the paths to the files used by the scaffold...	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	a ruler for the scaffold-based maps.	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	removed a chromosome caching scheme that caused problems...	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	setting the map units in the constructor	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	added missing argument to get_chromosome() call	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	changed how the get_markers function works in regards...	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	stylistic changes.	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	small changes in how units are displayed	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	made a small adjustment how units are displayed	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	added support for scaffold maps	commit \| commitdiff \| tree
2010-05-12	Lukas Mueller	added zooming capability to the scaffold map.	commit \| commitdiff \| tree
2010-04-30	Lukas Mueller	A chromosome class for scaffold-based chromosomes.	commit \| commitdiff \| tree
2010-04-30	Lukas Mueller	fixed a bug in the chromosome length calculation.	commit \| commitdiff \| tree
2010-04-30	Lukas Mueller	added a function that will determine if a ruler will...	commit \| commitdiff \| tree
2010-04-26	Lukas Mueller	a map that displays a scaffold-based map from an ad...	commit \| commitdiff \| tree
2010-04-26	Lukas Mueller	added support for a scaffold map (this should be modified...	commit \| commitdiff \| tree
2010-04-14	Lukas Mueller	fixed the link for the ITAG map. Now goes to the correct...	commit \| commitdiff \| tree
2010-04-14	Lukas Mueller	implemented the formatting of the url using a code...	commit \| commitdiff \| tree
2010-04-14	Lukas Mueller	committing some changes for testing on pg83-devel	commit \| commitdiff \| tree
2010-04-13	Lukas Mueller	adding code for links to gbrowse2	commit \| commitdiff \| tree
2010-04-12	Lukas Mueller	fixed a typo	commit \| commitdiff \| tree
2010-04-12	Lukas Mueller	removing a prematurely committed section	commit \| commitdiff \| tree
2010-04-12	Lukas Mueller	attempt to fix the maps... SGN::Context not yet factored out	commit \| commitdiff \| tree
2010-04-07	Lukas Mueller	fixed a bug which caused the links to the chromosome...	commit \| commitdiff \| tree
2010-03-10	Lukas Mueller	futzed around with the dependencies (somewhat based...	commit \| commitdiff \| tree
2010-03-05	Lukas Mueller	a build script for the cview component... based on...	commit \| commitdiff \| tree
2010-03-03	Lukas Mueller	moving the Cview test directories	commit \| commitdiff \| tree
2010-03-03	Lukas Mueller	Removing print STDERR statements....	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	removing mis-placed directory	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	moving more stuff...	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	moving even more stuff	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	moving more stuff	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	moving stuff around	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	oops, this directory was missed...	commit \| commitdiff \| tree
2010-03-02	Lukas Mueller	Moving Cview to its own component.	commit \| commitdiff \| tree

A comparative genetic map viewer

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