etc/bashrc

   1 #!/bin/bash
   2 #----------------------------------*-sh-*--------------------------------------
   3 # =========                 |
   4 # \\      /  F ield         | foam-extend: Open Source CFD
   5 #  \\    /   O peration     |
   6 #   \\  /    A nd           | For copyright notice see file Copyright
   7 #    \\/     M anipulation  |
   8 #------------------------------------------------------------------------------
   9 # License
  10 #     This file is part of foam-extend.
  11 #
  12 #     foam-extend is free software: you can redistribute it and/or modify it
  13 #     under the terms of the GNU General Public License as published by the
  14 #     Free Software Foundation, either version 3 of the License, or (at your
  15 #     option) any later version.
  16 #
  17 #     foam-extend is distributed in the hope that it will be useful, but
  18 #     WITHOUT ANY WARRANTY; without even the implied warranty of
  19 #     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
  20 #     General Public License for more details.
  21 #
  22 #     You should have received a copy of the GNU General Public License
  23 #     along with foam-extend.  If not, see <http://www.gnu.org/licenses/>.
  24 #
  25 # Script
  26 #     etc/bashrc
  27 #
  28 # Description
  29 #     Startup file for FOAM
  30 #     Sourced from ~/.profile or ~/.bashrc
  31 #     Should be usable by any POSIX-compliant shell (eg, ksh)
  32 #
  33 #------------------------------------------------------------------------------
  34
  35 export WM_PROJECT=foam
  36 export WM_FORK=extend
  37 export WM_PROJECT_VERSION=3.1
  38
  39 # helps to easily write #ifdefs to detect a dev-version
  40 export FOAM_DEV=1
  41
  42 ###############################################################################
  43 # USER EDITABLE PART
  44 #
  45 # either set $FOAM_INST_DIR before sourcing this file or set
  46 #    $foamInstall below to where FOAM is installed
  47 #
  48 # Location of FOAM installation
  49 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  50 foamInstall=$HOME/$WM_PROJECT
  51 # foamInstall=~$WM_PROJECT
  52 # foamInstall=/usr/local/$WM_PROJECT
  53 # foamInstall=/opt/$WM_PROJECT
  54 # foamInstall=/usr/lib
  55 #
  56 # END OF (NORMAL) USER EDITABLE PART
  57 ################################################################################
  58
  59 # note the location for later use (eg, in job scripts)
  60 : ${FOAM_INST_DIR:=$foamInstall}; export FOAM_INST_DIR
  61
  62 # The old dirs to be cleaned from the various environment variables
  63 # - remove anything under top-level directory.
  64 # NB: the WM_PROJECT_INST_DIR might not be identical between versions
  65 foamOldDirs="$FOAM_INST_DIR $HOME/$WM_PROJECT/$USER"
  66 if [ "$WM_PROJECT_INST_DIR" != "$FOAM_INST_DIR" ]
  67 then
  68     foamOldDirs="$WM_PROJECT_INST_DIR $foamOldDirs"
  69 fi
  70
  71
  72 # Location of site/user files
  73 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  74 export WM_PROJECT_INST_DIR=$FOAM_INST_DIR
  75 export WM_PROJECT_DIR=$WM_PROJECT_INST_DIR/$WM_PROJECT-$WM_FORK-$WM_PROJECT_VERSION
  76 export WM_PROJECT_USER_DIR=$HOME/$WM_PROJECT/$USER-$WM_PROJECT_VERSION
  77
  78 # Location of third-party software
  79 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  80 #: ${WM_THIRD_PARTY_DIR=$WM_PROJECT_INST_DIR/ThirdParty-$WM_PROJECT_VERSION}; export WM_THIRD_PARTY_DIR
  81 export WM_THIRD_PARTY_DIR=$WM_PROJECT_DIR/ThirdParty
  82
  83 # Enabling the usage of third-party software
  84 # This can be overriden in prefs.sh
  85 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  86 # For AllMake.stage1
  87 export WM_THIRD_PARTY_USE_CMAKE_322=1
  88
  89 #
  90 # For AllMake.stage2
  91 export WM_THIRD_PARTY_USE_OPENMPI_184=1
  92
  93 #
  94 # For AllMake.stage3
  95 export WM_THIRD_PARTY_USE_METIS_510=1
  96 export WM_THIRD_PARTY_USE_PARMGRIDGEN_10=1
  97 export WM_THIRD_PARTY_USE_LIBCCMIO_261=1
  98 export WM_THIRD_PARTY_USE_MESQUITE_212=1
  99 export WM_THIRD_PARTY_USE_SCOTCH_604=1
 100 export WM_THIRD_PARTY_USE_PARMETIS_403=1
 101 export WM_THIRD_PARTY_USE_PYFOAM_064=1
 102 export WM_THIRD_PARTY_USE_HWLOC_1101=1
 103
 104 #
 105 # For AllMake.stage4
 106 export WM_THIRD_PARTY_USE_QT_486=1
 107 export WM_THIRD_PARTY_USE_PARAVIEW_431=1
 108
 109
 110 # Source files, possibly with some verbosity
 111 _foamSource()
 112 {
 113    while [ $# -ge 1 ]
 114    do
 115       [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "Sourcing: $1" 1>&2
 116       . $1
 117       shift
 118    done
 119 }
 120
 121 # Add in preset user or site preferences:
 122 if [ -e $WM_PROJECT_DIR/etc/prefs.sh ]
 123 then
 124     _foamSource $WM_PROJECT_DIR/etc/prefs.sh
 125 else
 126      [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "No prefs.sh found"
 127 fi
 128
 129
 130 # Evaluate command-line parameters
 131 while [ $# -gt 0 ]
 132 do
 133     case "$1" in
 134     *=)
 135         # name=       -> unset name
 136         eval "unset ${1%=}"
 137         ;;
 138     *=*)
 139         # name=value  -> export name=value
 140         eval "export $1"
 141         ;;
 142     esac
 143     shift
 144 done
 145
 146
 147 # Operating System/Platform
 148 # ~~~~~~~~~~~~~~~~~~~~~~~~~
 149 # WM_OSTYPE = POSIX | ????
 150 : ${WM_OSTYPE:=POSIX}; export WM_OSTYPE
 151
 152
 153 # Compiler: set to Gcc or Icc (for Intel's icc)
 154 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 155 : ${WM_COMPILER:=Gcc}; export WM_COMPILER
 156 #: ${WM_COMPILER:=Icc}; export WM_COMPILER
 157
 158 export WM_COMPILER_ARCH=
 159 export WM_COMPILER_LIB_ARCH=
 160
 161
 162 # Compilation options (architecture, precision, optimised, debug or profiling)
 163 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 164
 165 # WM_ARCH_OPTION = 32 | 64
 166 : ${WM_ARCH_OPTION:=64}; export WM_ARCH_OPTION
 167
 168 # WM_PRECISION_OPTION = LDP | DP | SP
 169 : ${WM_PRECISION_OPTION:=DP}; export WM_PRECISION_OPTION
 170
 171 # WM_COMPILE_OPTION = Opt | Debug | Prof
 172 : ${WM_COMPILE_OPTION:=Opt}; export WM_COMPILE_OPTION
 173
 174 # WM_MPLIB = SYSTEMOPENMPI | OPENMPI | MPICH | MPICH-GM | HPMPI | GAMMA | MPI | QSMPI | MVAPICH2
 175 : ${WM_MPLIB:=OPENMPI}; export WM_MPLIB
 176
 177 # WM_NCOMPPROCS = <number of processes to use>
 178 # Warning: Need to use a complete path for foamGetSystemInfo because the PATH
 179 # environment variable is not properly initialized yet.
 180 : ${WM_NCOMPPROCS:=`$WM_PROJECT_DIR/bin/foamGetSystemInfo -nbrCores`}; export WM_NCOMPPROCS
 181
 182
 183 # Run options (floating-point signal handling and memory initialisation)
 184 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 185 export FOAM_SIGFPE=
 186 # export FOAM_SETNAN=
 187
 188
 189 # Detect system type and set environment variables appropriately
 190 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 191 export WM_ARCH=`uname -s`
 192
 193 case $WM_ARCH in
 194 Linux)
 195     WM_ARCH=linux
 196
 197     # compiler specifics
 198     case `uname -m` in
 199     i686)
 200         ;;
 201
 202     x86_64)
 203         case $WM_ARCH_OPTION in
 204         32)
 205             export WM_COMPILER_ARCH='-64'
 206             export WM_CFLAGS='-m32 -fPIC'
 207             export WM_CXXFLAGS='-m32 -fPIC'
 208             export WM_LDFLAGS='-m32'
 209             ;;
 210         64)
 211             WM_ARCH=linux64
 212             export WM_COMPILER_LIB_ARCH=64
 213             export WM_CFLAGS='-m64 -fPIC'
 214             export WM_CXXFLAGS='-m64 -fPIC'
 215             export WM_LDFLAGS='-m64'
 216             ;;
 217         *)
 218             echo Unknown WM_ARCH_OPTION $WM_ARCH_OPTION, should be 32 or 64
 219             ;;
 220         esac
 221         ;;
 222
 223     ia64)
 224         WM_ARCH=linuxIA64
 225         export WM_COMPILER=I64
 226         ;;
 227
 228     mips64)
 229         WM_ARCH=SiCortex64
 230         export WM_COMPILER_LIB_ARCH=64
 231         export WM_CFLAGS='-mabi=64 -fPIC'
 232         export WM_CXXFLAGS='-mabi=64 -fPIC'
 233         export WM_LDFLAGS='-mabi=64 -G0'
 234         export WM_MPLIB=MPI
 235         ;;
 236
 237     ppc64)
 238         WM_ARCH=linuxPPC64
 239         export WM_COMPILER_LIB_ARCH=64
 240         export WM_CFLAGS='-m64 -fPIC'
 241         export WM_CXXFLAGS='-m64 -fPIC'
 242         export WM_LDFLAGS='-m64'
 243         ;;
 244
 245     *)
 246         echo Unknown processor type `uname -m` for Linux
 247         ;;
 248     esac
 249     ;;
 250
 251 Darwin)
 252     # this makes certain things easier
 253     export WM_ARCH_BASE=darwin
 254
 255     case `uname -p` in
 256     powerpc)
 257         export WM_ARCH=darwinPpc
 258     ;;
 259     i386)
 260         export WM_ARCH=darwinIntel
 261     ;;
 262     *)
 263         echo "This seems to be neither an Intel-Mac nor a PPC-Mac please tell me the output of 'uname -p'. Bernhard."
 264         export WM_ARCH=darwinUnknown
 265     ;;
 266     esac
 267
 268     case $WM_ARCH_OPTION in
 269     32)
 270         export WM_CFLAGS='-m32 -fPIC'
 271         export WM_CXXFLAGS='-m32 -fPIC'
 272         export WM_LDFLAGS='-m32'
 273     ;;
 274     64)
 275         export WM_ARCH=${WM_ARCH}64
 276         export WM_CFLAGS='-m64 -fPIC'
 277         export WM_CXXFLAGS='-m64 -fPIC'
 278         export WM_LDFLAGS='-m64'
 279     ;;
 280     *)
 281         echo Unknown WM_ARCH_OPTION $WM_ARCH_OPTION, should be 32 or 64
 282     ;;
 283     esac
 284
 285     # Using MacPorts
 286     : ${MACOSX_MACPORTS_ROOT:='/opt/local/etc/macports'}; export MACOSX_MACPORTS_ROOT
 287     which -s port >/dev/null
 288     if [ $? -eq "0" ]  && [ -d "$MACOSX_MACPORTS_ROOT" ]
 289     then
 290         if [ "$FOAM_VERBOSE" -a "$PS1" ]
 291         then
 292             echo "Using Macports binaries"
 293         fi
 294
 295         export WM_USE_MACPORT=1
 296         export WM_BASE_COMPILER=`echo $WM_COMPILER | tr -d "[:digit:]"`
 297         export WM_MACPORT_MPI_VERSION=`echo $WM_COMPILER | tr "[:upper:]" "[:lower:]"`
 298         export WM_MACPORT_VERSION=`echo $WM_MACPORT_MPI_VERSION | tr -d "[:alpha:]" | sed -e "s/\(.\)\(.\)/\1\.\2/"`
 299
 300         if [ -z "$WM_CHOSEN_MAC_MPI" ]
 301         then
 302             if [ -e '/opt/local/bin/mpicc' ]
 303             then
 304                 readlink /opt/local/bin/mpicc | grep openmpi >/dev/null
 305                 if [ $? -eq "0" ]
 306                 then
 307                     export WM_MPLIB=MACPORTOPENMPI
 308                     if [ "$FOAM_VERBOSE" -a "$PS1" ]
 309                     then
 310                         echo "Using OpenMPI from MacPorts"
 311                     fi
 312                 else
 313                     readlink /opt/local/bin/mpicc | grep mpich >/dev/null
 314                     if [ $? -eq "0" ]
 315                     then
 316                         export WM_MPLIB=MACPORTMPICH
 317                         if [ "$FOAM_VERBOSE" -a "$PS1" ]
 318                         then
 319                             echo "Using MPICH from MacPorts"
 320                         fi
 321                     else
 322                         echo "/opt/local/bin/mpicc neither OpenMPI nor MPICH. Confused. Defaulting to OPENMPI"
 323                         export WM_MPLIB=OPENMPI
 324                     fi
 325                 fi
 326             fi
 327         else
 328             export WM_MPLIB=$WM_CHOSEN_MAC_MPI
 329             if [ "$FOAM_VERBOSE" -a "$PS1" ]
 330             then
 331                 echo "User chose WM_CHOSEN_MAC_MPI=$WM_CHOSEN_MAC_MPI"
 332             fi
 333         fi
 334
 335         if [ "$WM_MPLIB" == "MACPORTOPENMPI" ]
 336         then
 337             if [ ! -e "/opt/local/lib/openmpi-$WM_MACPORT_MPI_VERSION" ]
 338             then
 339                 export WM_MACPORT_MPI_VERSION=mp
 340                 if [ ! -e "/opt/local/lib/openmpi-$WM_MACPORT_MPI_VERSION" ]
 341                 then
 342                     echo "Proper OpenMPI not installed. Either do 'port install openmpi-$WM_MACPORT_MPI_VERSION' or 'port install openmpi-default'"
 343                 fi
 344             fi
 345         else
 346             if [ "$WM_MPLIB" == "MACPORTMPICH" ]
 347             then
 348                 if [ ! -e "/opt/local/lib/mpich-$WM_MACPORT_MPI_VERSION" ]
 349                 then
 350                     echo "MPICH wants the same version as the used compiler. Do 'port install mpich-$WM_MACPORT_MPI_VERSION'"
 351                 fi
 352             fi
 353         fi
 354
 355         if [ "$WM_COMPILER" != "Gcc" ]
 356         then
 357             if [ "$WM_BASE_COMPILER" == "Gcc" ]
 358             then
 359                 export WM_CC="gcc-mp-$WM_MACPORT_VERSION"
 360                 export WM_CXX="g++-mp-$WM_MACPORT_VERSION"
 361                 export WM_FC="gfortran-mp-$WM_MACPORT_VERSION"
 362             elif [ "$WM_BASE_COMPILER" == "Clang" ]
 363             then
 364                 export WM_CC="clang-mp-$WM_MACPORT_VERSION"
 365                 export WM_CXX="clang++-mp-$WM_MACPORT_VERSION"
 366                 # Seems like there is no Fortran-frontend for LLVM at thistime
 367             elif [ "$WM_BASE_COMPILER" == "Dragonegg" ]
 368             then
 369                 export WM_CC="dragonegg-$WM_MACPORT_VERSION-gcc"
 370                 export WM_CXX="dragonegg-$WM_MACPORT_VERSION-g++"
 371                 export WM_CXX="dragonegg-$WM_MACPORT_VERSION-gfortran"
 372             else
 373                 echo "Unknown base compiler $WM_BASE_COMPILER"
 374             fi
 375
 376             ruleDirBase=$WM_PROJECT_DIR/wmake/rules/$WM_ARCH
 377             ruleDirTarget=$ruleDirBase$WM_BASE_COMPILER
 378             ruleDir=$ruleDirBase$WM_COMPILER
 379             if [ ! -e $ruleDir ]
 380             then
 381                 echo "Rule directory $ruleDir not existing. Linking to $ruleDirTarget"
 382                 ln -s $ruleDirTarget $ruleDir
 383             fi
 384             unset ruleDir ruleDirBase
 385         fi
 386     else
 387         echo "Warning: You are not using MacPorts. Make sure your compilation and MPI environment is correctly initialized"
 388     fi
 389
 390     # Make sure that binaries use the best features of the used OS-Version
 391     # We need to get rid of the revision number from this string. eg turn "10.7.5" into "10.7"
 392     #    v=(`sw_vers -productVersion | sed 's/\./ /g'`)
 393     #    export MACOSX_DEPLOYMENT_TARGET="${v[1]}.${v[2]}"
 394     export MACOSX_DEPLOYMENT_TARGET=`sw_vers -productVersion | sed -e "s/\([0-9][0-9]*\)\.\([0-9][0-9]*\)\.\([0-9][0-9]*\)/\1.\2/g"`
 395     ;;
 396
 397 SunOS)
 398     WM_ARCH=SunOS64
 399     export WM_COMPILER_LIB_ARCH=64
 400     export WM_CFLAGS='-mabi=64 -fPIC'
 401     export WM_CXXFLAGS='-mabi=64 -fPIC'
 402     export WM_LDFLAGS='-mabi=64 -G0'
 403     export WM_MPLIB=FJMPI
 404     ;;
 405
 406 *)  # an unsupported operating system
 407     cat <<USAGE
 408
 409     Your "$WM_ARCH" operating system is not supported by this release
 410     of foam-extend. For further assistance, please contact www.foam-extend.org
 411
 412 USAGE
 413     ;;
 414 esac
 415
 416
 417 # Clean standard environment variables (PATH, LD_LIBRARY_PATH, MANPATH)
 418 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 419 cleanProg=$WM_PROJECT_DIR/bin/foamCleanPath
 420
 421 #- Clean PATH
 422 cleanEnv=`$cleanProg "$PATH" "$foamOldDirs"` && PATH="$cleanEnv"
 423
 424 #- Clean LD_LIBRARY_PATH
 425 cleanEnv=`$cleanProg "$LD_LIBRARY_PATH" "$foamOldDirs"` && LD_LIBRARY_PATH="$cleanEnv"
 426
 427 #- Clean DYLD_LIBRARY_PATH
 428 if [[ "$WM_ARCH_BASE" == "darwin" ]]
 429 then
 430     cleanEnv=`$cleanProg "$DYLD_LIBRARY_PATH" "$foamOldDirs"` && DYLD_LIBRARY_PATH="$cleanEnv"
 431 fi
 432
 433 #- Clean MANPATH
 434 cleanEnv=`$cleanProg "$MANPATH" "$foamCleanDirs"` && MANPATH="$cleanEnv"
 435
 436 export PATH LD_LIBRARY_PATH MANPATH
 437
 438 # Source project setup files
 439 # ~~~~~~~~~~~~~~~~~~~~~~~~~~
 440
 441 _foamSource $WM_PROJECT_DIR/etc/settings.sh
 442 _foamSource $WM_PROJECT_DIR/etc/aliases.sh
 443
 444
 445 # Source user setup files for optional packages
 446 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 447 # _foamSource $WM_PROJECT_DIR/etc/apps/paraview/bashrc
 448 # _foamSource $WM_PROJECT_DIR/etc/apps/paraview3/bashrc
 449 # _foamSource $WM_PROJECT_DIR/etc/apps/ensight/bashrc
 450
 451
 452 # Clean environment paths again. Only remove duplicates
 453 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 454 #- Clean PATH
 455 cleanEnv=`$cleanProg "$PATH"` && PATH="$cleanEnv"
 456
 457 #- Clean LD_LIBRARY_PATH
 458 cleanEnv=`$cleanProg "$LD_LIBRARY_PATH"` && LD_LIBRARY_PATH="$cleanEnv"
 459
 460 #- Clean MANPATH
 461 cleanEnv=`$cleanProg "$MANPATH"` && MANPATH="$cleanEnv:"
 462
 463 export PATH LD_LIBRARY_PATH MANPATH
 464
 465 #- Clean LD_PRELOAD
 466 if [ "$LD_PRELOAD" != "" ]
 467 then
 468     cleanEnv=`$cleanProg "$LD_PRELOAD"` && LD_PRELOAD="$cleanEnv"
 469     export LD_PRELOAD
 470 fi
 471
 472 # temporarily disabled.  HJ, 13/Jun/2014
 473 # if [[ `uname -s` == "Darwin" ]]
 474 # then
 475 #     if [[ `ulimit -n` == "unlimited" || `ulimit -n` < 8192 ]]
 476 #     then
 477 #       # higher limit needed for wmkdeps
 478 #       ulimit -n 8192
 479 #     fi
 480 # fi
 481
 482 # cleanup environment:
 483 # ~~~~~~~~~~~~~~~~~~~~
 484 unset cleanEnv cleanProg foamInstall foamOldDirs
 485 unset _foamSource
 486
 487 # -----------------------------------------------------------------------------