etc/bashrc

   1 #!/bin/bash
   2 #----------------------------------*-sh-*--------------------------------------
   3 # =========                 |
   4 # \\      /  F ield         | foam-extend: Open Source CFD
   5 #  \\    /   O peration     | Version:     3.2
   6 #   \\  /    A nd           | Web:         http://www.foam-extend.org
   7 #    \\/     M anipulation  | For copyright notice see file Copyright
   8 #------------------------------------------------------------------------------
   9 # License
  10 #     This file is part of foam-extend.
  11 #
  12 #     foam-extend is free software: you can redistribute it and/or modify it
  13 #     under the terms of the GNU General Public License as published by the
  14 #     Free Software Foundation, either version 3 of the License, or (at your
  15 #     option) any later version.
  16 #
  17 #     foam-extend is distributed in the hope that it will be useful, but
  18 #     WITHOUT ANY WARRANTY; without even the implied warranty of
  19 #     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
  20 #     General Public License for more details.
  21 #
  22 #     You should have received a copy of the GNU General Public License
  23 #     along with foam-extend.  If not, see <http://www.gnu.org/licenses/>.
  24 #
  25 # Script
  26 #     etc/bashrc
  27 #
  28 # Description
  29 #     Startup file for FOAM
  30 #     Sourced from ~/.profile or ~/.bashrc
  31 #     Should be usable by any POSIX-compliant shell (eg, ksh)
  32 #
  33 #------------------------------------------------------------------------------
  34
  35 export WM_PROJECT=foam
  36 export WM_FORK=extend
  37 export WM_PROJECT_VERSION=3.1
  38
  39 # helps to easily write #ifdefs to detect a dev-version
  40 export FOAM_DEV=1
  41
  42 ###############################################################################
  43 # USER EDITABLE PART
  44 #
  45 # either set $FOAM_INST_DIR before sourcing this file or set
  46 #    $foamInstall below to where FOAM is installed
  47 #
  48 # Location of FOAM installation
  49 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  50 foamInstall=$HOME/$WM_PROJECT
  51 # foamInstall=~$WM_PROJECT
  52 # foamInstall=/usr/local/$WM_PROJECT
  53 # foamInstall=/opt/$WM_PROJECT
  54 # foamInstall=/usr/lib
  55 #
  56 # END OF (NORMAL) USER EDITABLE PART
  57 ################################################################################
  58
  59 # note the location for later use (eg, in job scripts)
  60 : ${FOAM_INST_DIR:=$foamInstall}; export FOAM_INST_DIR
  61
  62 # The old dirs to be cleaned from the various environment variables
  63 # - remove anything under top-level directory.
  64 # NB: the WM_PROJECT_INST_DIR might not be identical between versions
  65 foamOldDirs="$FOAM_INST_DIR $HOME/$WM_PROJECT/$USER"
  66 if [ "$WM_PROJECT_INST_DIR" != "$FOAM_INST_DIR" ]
  67 then
  68     foamOldDirs="$WM_PROJECT_INST_DIR $foamOldDirs"
  69 fi
  70
  71
  72 # Location of site/user files
  73 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  74 export WM_PROJECT_INST_DIR=$FOAM_INST_DIR
  75 export WM_PROJECT_DIR=$WM_PROJECT_INST_DIR/$WM_PROJECT-$WM_FORK-$WM_PROJECT_VERSION
  76 export WM_PROJECT_USER_DIR=$HOME/$WM_PROJECT/$USER-$WM_PROJECT_VERSION
  77
  78 # Location of third-party software
  79 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  80 #: ${WM_THIRD_PARTY_DIR=$WM_PROJECT_INST_DIR/ThirdParty-$WM_PROJECT_VERSION}; export WM_THIRD_PARTY_DIR
  81 export WM_THIRD_PARTY_DIR=$WM_PROJECT_DIR/ThirdParty
  82
  83 # Enabling the usage of third-party software
  84 # This can be overriden in prefs.sh
  85 # Use 'set' and 'unset' to adjust for your environent
  86 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  87 # For AllMake.stage1
  88 export WM_THIRD_PARTY_USE_CMAKE_322=1
  89
  90 #
  91 # For AllMake.stage2
  92 export WM_THIRD_PARTY_USE_OPENMPI_184=1
  93
  94 #
  95 # For AllMake.stage3
  96 export WM_THIRD_PARTY_USE_METIS_510=1
  97 export WM_THIRD_PARTY_USE_PARMGRIDGEN_10=1
  98 export WM_THIRD_PARTY_USE_LIBCCMIO_261=1
  99 export WM_THIRD_PARTY_USE_MESQUITE_212=1
 100 export WM_THIRD_PARTY_USE_SCOTCH_604=1
 101 export WM_THIRD_PARTY_USE_PARMETIS_403=1
 102 export WM_THIRD_PARTY_USE_PYFOAM_064=1
 103 export WM_THIRD_PARTY_USE_HWLOC_1101=1
 104
 105 #
 106 # For AllMake.stage4
 107 #export WM_THIRD_PARTY_USE_QT_486=1
 108 export WM_THIRD_PARTY_USE_PARAVIEW_431=1
 109
 110
 111 # Source files, possibly with some verbosity
 112 _foamSource()
 113 {
 114    while [ $# -ge 1 ]
 115    do
 116       [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "Sourcing: $1" 1>&2
 117       . $1
 118       shift
 119    done
 120 }
 121
 122 # Add in preset user or site preferences:
 123 if [ -e $WM_PROJECT_DIR/etc/prefs.sh ]
 124 then
 125     _foamSource $WM_PROJECT_DIR/etc/prefs.sh
 126 else
 127      [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "No prefs.sh found"
 128 fi
 129
 130
 131 # Evaluate command-line parameters
 132 while [ $# -gt 0 ]
 133 do
 134     case "$1" in
 135     *=)
 136         # name=       -> unset name
 137         eval "unset ${1%=}"
 138         ;;
 139     *=*)
 140         # name=value  -> export name=value
 141         eval "export $1"
 142         ;;
 143     esac
 144     shift
 145 done
 146
 147
 148 # Operating System/Platform
 149 # ~~~~~~~~~~~~~~~~~~~~~~~~~
 150 # WM_OSTYPE = POSIX | ????
 151 : ${WM_OSTYPE:=POSIX}; export WM_OSTYPE
 152
 153
 154 # Compiler: set to Gcc or Icc (for Intel's icc)
 155 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 156 : ${WM_COMPILER:=Gcc}; export WM_COMPILER
 157 #: ${WM_COMPILER:=Icc}; export WM_COMPILER
 158
 159 export WM_COMPILER_ARCH=
 160 export WM_COMPILER_LIB_ARCH=
 161
 162
 163 # Compilation options (architecture, precision, optimised, debug or profiling)
 164 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 165
 166 # WM_ARCH_OPTION = 32 | 64
 167 : ${WM_ARCH_OPTION:=64}; export WM_ARCH_OPTION
 168
 169 # WM_PRECISION_OPTION = LDP | DP | SP
 170 : ${WM_PRECISION_OPTION:=DP}; export WM_PRECISION_OPTION
 171
 172 # WM_COMPILE_OPTION = Opt | Debug | Prof
 173 : ${WM_COMPILE_OPTION:=Opt}; export WM_COMPILE_OPTION
 174
 175 # WM_MPLIB = SYSTEMOPENMPI | OPENMPI | MPICH | MPICH-GM | HPMPI | GAMMA | MPI | QSMPI | MVAPICH2
 176 : ${WM_MPLIB:=OPENMPI}; export WM_MPLIB
 177
 178 # WM_NCOMPPROCS = <number of processes to use>
 179 # Warning: Need to use a complete path for foamGetSystemInfo because the PATH
 180 # environment variable is not properly initialized yet.
 181 : ${WM_NCOMPPROCS:=`$WM_PROJECT_DIR/bin/foamGetSystemInfo -nbrCores`}; export WM_NCOMPPROCS
 182
 183
 184 # Run options (floating-point signal handling and memory initialisation)
 185 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 186 export FOAM_SIGFPE=
 187 # export FOAM_SETNAN=
 188
 189
 190 # Detect system type and set environment variables appropriately
 191 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 192 export WM_ARCH=`uname -s`
 193
 194 case $WM_ARCH in
 195 Linux)
 196     WM_ARCH=linux
 197
 198     # compiler specifics
 199     case `uname -m` in
 200     i686)
 201         ;;
 202
 203     x86_64)
 204         case $WM_ARCH_OPTION in
 205         32)
 206             export WM_COMPILER_ARCH='-64'
 207             export WM_CFLAGS='-m32 -fPIC'
 208             export WM_CXXFLAGS='-m32 -fPIC'
 209             export WM_LDFLAGS='-m32'
 210             ;;
 211         64)
 212             WM_ARCH=linux64
 213             export WM_COMPILER_LIB_ARCH=64
 214             export WM_CFLAGS='-m64 -fPIC'
 215             export WM_CXXFLAGS='-m64 -fPIC'
 216             export WM_LDFLAGS='-m64'
 217             ;;
 218         *)
 219             echo Unknown WM_ARCH_OPTION $WM_ARCH_OPTION, should be 32 or 64
 220             ;;
 221         esac
 222         ;;
 223
 224     ia64)
 225         WM_ARCH=linuxIA64
 226         export WM_COMPILER=I64
 227         ;;
 228
 229     mips64)
 230         WM_ARCH=SiCortex64
 231         export WM_COMPILER_LIB_ARCH=64
 232         export WM_CFLAGS='-mabi=64 -fPIC'
 233         export WM_CXXFLAGS='-mabi=64 -fPIC'
 234         export WM_LDFLAGS='-mabi=64 -G0'
 235         export WM_MPLIB=MPI
 236         ;;
 237
 238     ppc64)
 239         WM_ARCH=linuxPPC64
 240         export WM_COMPILER_LIB_ARCH=64
 241         export WM_CFLAGS='-m64 -fPIC'
 242         export WM_CXXFLAGS='-m64 -fPIC'
 243         export WM_LDFLAGS='-m64'
 244         ;;
 245
 246     *)
 247         echo Unknown processor type `uname -m` for Linux
 248         ;;
 249     esac
 250     ;;
 251
 252 Darwin)
 253     # this makes certain things easier
 254     export WM_ARCH_BASE=darwin
 255
 256     case `uname -p` in
 257     powerpc)
 258         export WM_ARCH=darwinPpc
 259     ;;
 260     i386)
 261         export WM_ARCH=darwinIntel
 262     ;;
 263     *)
 264         echo "This seems to be neither an Intel-Mac nor a PPC-Mac please tell me the output of 'uname -p'. Bernhard."
 265         export WM_ARCH=darwinUnknown
 266     ;;
 267     esac
 268
 269     case $WM_ARCH_OPTION in
 270     32)
 271         export WM_CFLAGS='-m32 -fPIC'
 272         export WM_CXXFLAGS='-m32 -fPIC'
 273         export WM_LDFLAGS='-m32'
 274     ;;
 275     64)
 276         export WM_ARCH=${WM_ARCH}64
 277         export WM_CFLAGS='-m64 -fPIC'
 278         export WM_CXXFLAGS='-m64 -fPIC'
 279         export WM_LDFLAGS='-m64'
 280     ;;
 281     *)
 282         echo Unknown WM_ARCH_OPTION $WM_ARCH_OPTION, should be 32 or 64
 283     ;;
 284     esac
 285
 286     # Using MacPorts
 287     : ${MACOSX_MACPORTS_ROOT:='/opt/local/etc/macports'}; export MACOSX_MACPORTS_ROOT
 288     which -s port >/dev/null
 289     if [ $? -eq "0" ]  && [ -d "$MACOSX_MACPORTS_ROOT" ]
 290     then
 291     if [ "$FOAM_VERBOSE" -a "$PS1" ]
 292     then
 293         echo "Using Macports binaries"
 294     fi
 295
 296     export WM_USE_MACPORT=1
 297     export WM_BASE_COMPILER=`echo $WM_COMPILER | tr -d "[:digit:]"`
 298     export WM_MACPORT_MPI_VERSION=`echo $WM_COMPILER | tr "[:upper:]" "[:lower:]"`
 299     export WM_MACPORT_VERSION=`echo $WM_MACPORT_MPI_VERSION | tr -d "[:alpha:]" | sed -e "s/\(.\)\(.\)/\1\.\2/"`
 300
 301     if [ -z "$WM_CHOSEN_MAC_MPI" ]
 302     then
 303         if [ -e '/opt/local/bin/mpicc' ]
 304         then
 305             readlink /opt/local/bin/mpicc | grep openmpi >/dev/null
 306         if [ $? -eq "0" ]
 307         then
 308             export WM_MPLIB=MACPORTOPENMPI
 309             if [ "$FOAM_VERBOSE" -a "$PS1" ]
 310             then
 311                 echo "Using OpenMPI from MacPorts"
 312             fi
 313         else
 314             readlink /opt/local/bin/mpicc | grep mpich >/dev/null
 315             if [ $? -eq "0" ]
 316             then
 317                 export WM_MPLIB=MACPORTMPICH
 318             if [ "$FOAM_VERBOSE" -a "$PS1" ]
 319             then
 320                 echo "Using MPICH from MacPorts"
 321             fi
 322             else
 323                 echo "/opt/local/bin/mpicc neither OpenMPI nor MPICH. Confused. Defaulting to OPENMPI"
 324                 export WM_MPLIB=OPENMPI
 325             fi
 326         fi
 327         fi
 328     else
 329         export WM_MPLIB=$WM_CHOSEN_MAC_MPI
 330         if [ "$FOAM_VERBOSE" -a "$PS1" ]
 331         then
 332         echo "User chose WM_CHOSEN_MAC_MPI=$WM_CHOSEN_MAC_MPI"
 333         fi
 334     fi
 335
 336     if [ "$WM_MPLIB" == "MACPORTOPENMPI" ]
 337     then
 338         if [ ! -e "/opt/local/lib/openmpi-$WM_MACPORT_MPI_VERSION" ]
 339         then
 340             export WM_MACPORT_MPI_VERSION=mp
 341         if [ ! -e "/opt/local/lib/openmpi-$WM_MACPORT_MPI_VERSION" ]
 342         then
 343             echo "Proper OpenMPI not installed. Either do 'port install openmpi-$WM_MACPORT_MPI_VERSION' or 'port install openmpi-default'"
 344         fi
 345         fi
 346     else
 347         if [ "$WM_MPLIB" == "MACPORTMPICH" ]
 348         then
 349         if [ ! -e "/opt/local/lib/mpich-$WM_MACPORT_MPI_VERSION" ]
 350         then
 351             echo "MPICH wants the same version as the used compiler. Do 'port install mpich-$WM_MACPORT_MPI_VERSION'"
 352         fi
 353         fi
 354     fi
 355
 356     if [ "$WM_COMPILER" != "Gcc" ]
 357     then
 358         if [ "$WM_BASE_COMPILER" == "Gcc" ]
 359         then
 360             export WM_CC="gcc-mp-$WM_MACPORT_VERSION"
 361             export WM_CXX="g++-mp-$WM_MACPORT_VERSION"
 362             export WM_FC="gfortran-mp-$WM_MACPORT_VERSION"
 363         elif [ "$WM_BASE_COMPILER" == "Clang" ]
 364         then
 365             export WM_CC="clang-mp-$WM_MACPORT_VERSION"
 366             export WM_CXX="clang++-mp-$WM_MACPORT_VERSION"
 367         # Seems like there is no Fortran-frontend for LLVM at thistime
 368         elif [ "$WM_BASE_COMPILER" == "Dragonegg" ]
 369         then
 370             export WM_CC="dragonegg-$WM_MACPORT_VERSION-gcc"
 371             export WM_CXX="dragonegg-$WM_MACPORT_VERSION-g++"
 372             export WM_CXX="dragonegg-$WM_MACPORT_VERSION-gfortran"
 373         else
 374             echo "Unknown base compiler $WM_BASE_COMPILER"
 375         fi
 376
 377         ruleDirBase=$WM_PROJECT_DIR/wmake/rules/$WM_ARCH
 378         ruleDirTarget=$ruleDirBase$WM_BASE_COMPILER
 379         ruleDir=$ruleDirBase$WM_COMPILER
 380         if [ ! -e $ruleDir ]
 381         then
 382             echo "Rule directory $ruleDir not existing. Linking to $ruleDirTarget"
 383             ln -s $ruleDirTarget $ruleDir
 384         fi
 385         unset ruleDir ruleDirBase
 386     fi
 387     else
 388         echo "Warning: You are not using MacPorts. Make sure your compilation and MPI environment is correctly initialized"
 389     fi
 390
 391     # Make sure that binaries use the best features of the used OS-Version
 392     # We need to get rid of the revision number from this string. eg turn "10.7.5" into "10.7"
 393     #    v=(`sw_vers -productVersion | sed 's/\./ /g'`)
 394     #    export MACOSX_DEPLOYMENT_TARGET="${v[1]}.${v[2]}"
 395     export MACOSX_DEPLOYMENT_TARGET=`sw_vers -productVersion | sed -e "s/\([0-9][0-9]*\)\.\([0-9][0-9]*\)\.\([0-9][0-9]*\)/\1.\2/g"`
 396     ;;
 397
 398 SunOS)
 399     WM_ARCH=SunOS64
 400     export WM_COMPILER_LIB_ARCH=64
 401     export WM_CFLAGS='-mabi=64 -fPIC'
 402     export WM_CXXFLAGS='-mabi=64 -fPIC'
 403     export WM_LDFLAGS='-mabi=64 -G0'
 404     export WM_MPLIB=FJMPI
 405     ;;
 406
 407 *)  # an unsupported operating system
 408     cat <<USAGE
 409
 410     Your "$WM_ARCH" operating system is not supported by this release
 411     of foam-extend. For further assistance, please contact www.foam-extend.org
 412
 413 USAGE
 414     ;;
 415 esac
 416
 417
 418 # Clean standard environment variables (PATH, LD_LIBRARY_PATH, MANPATH)
 419 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 420 cleanProg=$WM_PROJECT_DIR/bin/foamCleanPath
 421
 422 #- Clean PATH
 423 cleanEnv=`$cleanProg "$PATH" "$foamOldDirs"` && PATH="$cleanEnv"
 424
 425 #- Clean LD_LIBRARY_PATH
 426 cleanEnv=`$cleanProg "$LD_LIBRARY_PATH" "$foamOldDirs"` && LD_LIBRARY_PATH="$cleanEnv"
 427
 428 #- Clean DYLD_LIBRARY_PATH
 429 if [[ "$WM_ARCH_BASE" == "darwin" ]]
 430 then
 431     cleanEnv=`$cleanProg "$DYLD_LIBRARY_PATH" "$foamOldDirs"` && DYLD_LIBRARY_PATH="$cleanEnv"
 432 fi
 433
 434 #- Clean MANPATH
 435 cleanEnv=`$cleanProg "$MANPATH" "$foamCleanDirs"` && MANPATH="$cleanEnv"
 436
 437 export PATH LD_LIBRARY_PATH MANPATH
 438
 439 # Source project setup files
 440 # ~~~~~~~~~~~~~~~~~~~~~~~~~~
 441
 442 _foamSource $WM_PROJECT_DIR/etc/settings.sh
 443 _foamSource $WM_PROJECT_DIR/etc/aliases.sh
 444
 445
 446 # Source user setup files for optional packages
 447 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 448 # _foamSource $WM_PROJECT_DIR/etc/apps/paraview/bashrc
 449 # _foamSource $WM_PROJECT_DIR/etc/apps/paraview3/bashrc
 450 # _foamSource $WM_PROJECT_DIR/etc/apps/ensight/bashrc
 451
 452
 453 # Clean environment paths again. Only remove duplicates
 454 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 455 #- Clean PATH
 456 cleanEnv=`$cleanProg "$PATH"` && PATH="$cleanEnv"
 457
 458 #- Clean LD_LIBRARY_PATH
 459 cleanEnv=`$cleanProg "$LD_LIBRARY_PATH"` && LD_LIBRARY_PATH="$cleanEnv"
 460
 461 #- Clean MANPATH
 462 cleanEnv=`$cleanProg "$MANPATH"` && MANPATH="$cleanEnv:"
 463
 464 export PATH LD_LIBRARY_PATH MANPATH
 465
 466 #- Clean LD_PRELOAD
 467 if [ "$LD_PRELOAD" != "" ]
 468 then
 469     cleanEnv=`$cleanProg "$LD_PRELOAD"` && LD_PRELOAD="$cleanEnv"
 470     export LD_PRELOAD
 471 fi
 472
 473 # temporarily disabled.  HJ, 13/Jun/2014
 474 # if [[ `uname -s` == "Darwin" ]]
 475 # then
 476 #     if [[ `ulimit -n` == "unlimited" || `ulimit -n` < 8192 ]]
 477 #     then
 478 #     # higher limit needed for wmkdeps
 479 #     ulimit -n 8192
 480 #     fi
 481 # fi
 482
 483 # cleanup environment:
 484 # ~~~~~~~~~~~~~~~~~~~~
 485 unset cleanEnv cleanProg foamInstall foamOldDirs
 486 unset _foamSource
 487
 488 # -----------------------------------------------------------------------------