share/top/vdw-msms.dat

   1 ; Very approximate VanderWaals radii
   2 ; only used for drawing atoms as balls or for calculating atomic overlap.
   3 ; longest matches are used
   4 ; '???' or '*' matches any residue name
   5 ; 'AAA' matches any protein residue name
   6 ;
   7 ; Used new values from the MSMS program Revision: 1.13
   8 ;
   9 ???  C     0.174
  10 ???  F     0.14
  11 ???  H     0.12
  12 ???  N     0.154
  13 ???  O     0.14
  14 ???  S     0.18
  15 GLY  MN1   0
  16 GLY  MN2   0
  17 ALA  MCB1  0
  18 ALA  MCB2  0
  19 VAL  MCG1  0
  20 VAL  MCG2  0
  21 ILE  MCG1  0
  22 ILE  MCG2  0
  23 ILE  MCD1  0
  24 ILE  MCD2  0
  25 LEU  MCD1  0
  26 LEU  MCD2  0
  27 MET  MCE1  0
  28 MET  MCE2  0
  29 TRP  MTRP1 0
  30 TRP  MTRP2 0
  31 THR  MCG1  0
  32 THR  MCG2  0
  33 LYSH MNZ1  0
  34 LYSH MNZ2  0