include/gmx_ana.h

   1 /*
   2  * This file is part of the GROMACS molecular simulation package.
   3  *
   4  * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
   5  * Copyright (c) 2001-2008, The GROMACS development team,
   6  * check out http://www.gromacs.org for more information.
   7  * Copyright (c) 2012,2013, by the GROMACS development team, led by
   8  * David van der Spoel, Berk Hess, Erik Lindahl, and including many
   9  * others, as listed in the AUTHORS file in the top-level source
  10  * directory and at http://www.gromacs.org.
  11  *
  12  * GROMACS is free software; you can redistribute it and/or
  13  * modify it under the terms of the GNU Lesser General Public License
  14  * as published by the Free Software Foundation; either version 2.1
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  37  */
  38
  39 #ifndef _gmx_ana_h
  40 #define _gmx_ana_h
  41 #include "visibility.h"
  42
  43 #ifdef __cplusplus
  44 extern "C" {
  45 #endif
  46
  47 GMX_LIBGMXANA_EXPORT
  48 int
  49 gmx_anadock(int argc, char *argv[]);
  50
  51 GMX_LIBGMXANA_EXPORT
  52 int
  53 gmx_analyze(int argc, char *argv[]);
  54
  55 GMX_LIBGMXANA_EXPORT
  56 int
  57 gmx_anaeig(int argc, char *argv[]);
  58
  59 GMX_LIBGMXANA_EXPORT
  60 int
  61 gmx_g_angle(int argc, char *argv[]);
  62
  63 GMX_LIBGMXANA_EXPORT
  64 int
  65 gmx_bar(int argc, char *argv[]);
  66
  67 GMX_LIBGMXANA_EXPORT
  68 int
  69 gmx_bond(int argc, char *argv[]);
  70
  71 GMX_LIBGMXANA_EXPORT
  72 int
  73 gmx_bundle(int argc, char *argv[]);
  74
  75 GMX_LIBGMXANA_EXPORT
  76 int
  77 gmx_chi(int argc, char *argv[]);
  78
  79 GMX_LIBGMXANA_EXPORT
  80 int
  81 gmx_cluster(int argc, char *argv[]);
  82
  83 GMX_LIBGMXANA_EXPORT
  84 int
  85 gmx_confrms(int argc, char *argv[]);
  86
  87 GMX_LIBGMXANA_EXPORT
  88 int
  89 gmx_covar(int argc, char *argv[]);
  90
  91 GMX_LIBGMXANA_EXPORT
  92 int
  93 gmx_current(int argc, char *argv[]);
  94
  95 GMX_LIBGMXANA_EXPORT
  96 int
  97 gmx_density(int argc, char *argv[]);
  98
  99 GMX_LIBGMXANA_EXPORT
 100 int
 101 gmx_densmap(int argc, char *argv[]);
 102
 103 GMX_LIBGMXANA_EXPORT
 104 int
 105 gmx_densorder(int argc, char *argv[]);
 106
 107 GMX_LIBGMXANA_EXPORT
 108 int
 109 gmx_dielectric(int argc, char *argv[]);
 110
 111 GMX_LIBGMXANA_EXPORT
 112 int
 113 gmx_dipoles(int argc, char *argv[]);
 114
 115 GMX_LIBGMXANA_EXPORT
 116 int
 117 gmx_disre(int argc, char *argv[]);
 118
 119 GMX_LIBGMXANA_EXPORT
 120 int
 121 gmx_dist(int argc, char *argv[]);
 122
 123 GMX_LIBGMXANA_EXPORT
 124 int
 125 gmx_do_dssp(int argc, char *argv[]);
 126
 127 GMX_LIBGMXANA_EXPORT
 128 int
 129 gmx_dos(int argc, char *argv[]);
 130
 131 GMX_LIBGMXANA_EXPORT
 132 int
 133 gmx_dyecoupl(int argc, char *argv[]);
 134
 135 GMX_LIBGMXANA_EXPORT
 136 int
 137 gmx_dyndom(int argc, char *argv[]);
 138
 139 GMX_LIBGMXANA_EXPORT
 140 int
 141 gmx_editconf(int argc, char *argv[]);
 142
 143 GMX_LIBGMXANA_EXPORT
 144 int
 145 gmx_eneconv(int argc, char *argv[]);
 146
 147 GMX_LIBGMXANA_EXPORT
 148 int
 149 gmx_enemat(int argc, char *argv[]);
 150
 151 GMX_LIBGMXANA_EXPORT
 152 int
 153 gmx_energy(int argc, char *argv[]);
 154
 155 GMX_LIBGMXANA_EXPORT
 156 int
 157 gmx_lie(int argc, char *argv[]);
 158
 159 GMX_LIBGMXANA_EXPORT
 160 int
 161 gmx_filter(int argc, char *argv[]);
 162
 163 GMX_LIBGMXANA_EXPORT
 164 int
 165 gmx_genbox(int argc, char *argv[]);
 166
 167 GMX_LIBGMXANA_EXPORT
 168 int
 169 gmx_genconf(int argc, char *argv[]);
 170
 171 GMX_LIBGMXANA_EXPORT
 172 int
 173 gmx_genion(int argc, char *argv[]);
 174
 175 GMX_LIBGMXANA_EXPORT
 176 int
 177 gmx_genpr(int argc, char *argv[]);
 178
 179 GMX_LIBGMXANA_EXPORT
 180 int
 181 gmx_gyrate(int argc, char *argv[]);
 182
 183 GMX_LIBGMXANA_EXPORT
 184 int
 185 gmx_h2order(int argc, char *argv[]);
 186
 187 GMX_LIBGMXANA_EXPORT
 188 int
 189 gmx_hbond(int argc, char *argv[]);
 190
 191 GMX_LIBGMXANA_EXPORT
 192 int
 193 gmx_helix(int argc, char *argv[]);
 194
 195 GMX_LIBGMXANA_EXPORT
 196 int
 197 gmx_helixorient(int argc, char *argv[]);
 198
 199 GMX_LIBGMXANA_EXPORT
 200 int
 201 gmx_hydorder(int argc, char *argv[]);
 202
 203 GMX_LIBGMXANA_EXPORT
 204 int
 205 gmx_kinetics(int argc, char *argv[]);
 206
 207 GMX_LIBGMXANA_EXPORT
 208 int
 209 gmx_make_edi(int argc, char *argv[]);
 210
 211 GMX_LIBGMXANA_EXPORT
 212 int
 213 gmx_make_ndx(int argc, char *argv[]);
 214
 215 GMX_LIBGMXANA_EXPORT
 216 int
 217 gmx_mindist(int argc, char *argv[]);
 218
 219 GMX_LIBGMXANA_EXPORT
 220 int
 221 gmx_mk_angndx(int argc, char *argv[]);
 222
 223 GMX_LIBGMXANA_EXPORT
 224 int
 225 gmx_msd(int argc, char *argv[]);
 226
 227 GMX_LIBGMXANA_EXPORT
 228 int
 229 gmx_morph(int argc, char *argv[]);
 230
 231 GMX_LIBGMXANA_EXPORT
 232 int
 233 gmx_nmeig(int argc, char *argv[]);
 234
 235 GMX_LIBGMXANA_EXPORT
 236 int
 237 gmx_nmens(int argc, char *argv[]);
 238
 239 GMX_LIBGMXANA_EXPORT
 240 int
 241 gmx_nmtraj(int argc, char *argv[]);
 242
 243 GMX_LIBGMXANA_EXPORT
 244 int
 245 gmx_order(int argc, char *argv[]);
 246
 247 GMX_LIBGMXANA_EXPORT
 248 int
 249 gmx_polystat(int argc, char *argv[]);
 250
 251 GMX_LIBGMXANA_EXPORT
 252 int
 253 gmx_potential(int argc, char *argv[]);
 254
 255 GMX_LIBGMXANA_EXPORT
 256 int
 257 gmx_principal(int argc, char *argv[]);
 258
 259 GMX_LIBGMXANA_EXPORT
 260 int
 261 gmx_rama(int argc, char *argv[]);
 262
 263 GMX_LIBGMXANA_EXPORT
 264 int
 265 gmx_rdf(int argc, char *argv[]);
 266
 267 GMX_LIBGMXANA_EXPORT
 268 int
 269 gmx_rotmat(int argc, char *argv[]);
 270
 271 GMX_LIBGMXANA_EXPORT
 272 int
 273 gmx_rms(int argc, char *argv[]);
 274
 275 GMX_LIBGMXANA_EXPORT
 276 int
 277 gmx_rmsdist(int argc, char *argv[]);
 278
 279 GMX_LIBGMXANA_EXPORT
 280 int
 281 gmx_rmsf(int argc, char *argv[]);
 282
 283 GMX_LIBGMXANA_EXPORT
 284 int
 285 gmx_rotacf(int argc, char *argv[]);
 286
 287 GMX_LIBGMXANA_EXPORT
 288 int
 289 gmx_saltbr(int argc, char *argv[]);
 290
 291 GMX_LIBGMXANA_EXPORT
 292 int
 293 gmx_sas(int argc, char *argv[]);
 294
 295 GMX_LIBGMXANA_EXPORT
 296 int
 297 gmx_sdf(int argc, char *argv[]);
 298
 299 GMX_LIBGMXANA_EXPORT
 300 int
 301 gmx_select(int argc, char *argv[]);
 302
 303 GMX_LIBGMXANA_EXPORT
 304 int
 305 gmx_sgangle(int argc, char *argv[]);
 306
 307 GMX_LIBGMXANA_EXPORT
 308 int
 309 gmx_sham(int argc, char *argv[]);
 310
 311 GMX_LIBGMXANA_EXPORT
 312 int
 313 gmx_sigeps(int argc, char *argv[]);
 314
 315 GMX_LIBGMXANA_EXPORT
 316 int
 317 gmx_sorient(int argc, char *argv[]);
 318
 319 GMX_LIBGMXANA_EXPORT
 320 int
 321 gmx_spol(int argc, char *argv[]);
 322
 323 GMX_LIBGMXANA_EXPORT
 324 int
 325 gmx_spatial(int argc, char *argv[]);
 326
 327 GMX_LIBGMXANA_EXPORT
 328 int
 329 gmx_tcaf(int argc, char *argv[]);
 330
 331 GMX_LIBGMXANA_EXPORT
 332 int
 333 gmx_traj(int argc, char *argv[]);
 334
 335 GMX_LIBGMXANA_EXPORT
 336 int
 337 gmx_trjcat(int argc, char *argv[]);
 338
 339 GMX_LIBGMXANA_EXPORT
 340 int
 341 gmx_trjconv(int argc, char *argv[]);
 342
 343 GMX_LIBGMXANA_EXPORT
 344 int
 345 gmx_trjorder(int argc, char *argv[]);
 346
 347 GMX_LIBGMXANA_EXPORT
 348 int
 349 gmx_tune_pme(int argc, char *argv[]);
 350
 351 GMX_LIBGMXANA_EXPORT
 352 int
 353 gmx_velacc(int argc, char *argv[]);
 354
 355 GMX_LIBGMXANA_EXPORT
 356 int
 357 gmx_clustsize(int argc, char *argv[]);
 358
 359 GMX_LIBGMXANA_EXPORT
 360 int
 361 gmx_mdmat(int argc, char *argv[]);
 362
 363 GMX_LIBGMXANA_EXPORT
 364 int
 365 gmx_vanhove(int argc, char *argv[]);
 366
 367 GMX_LIBGMXANA_EXPORT
 368 int
 369 gmx_wham(int argc, char *argv[]);
 370
 371 GMX_LIBGMXANA_EXPORT
 372 int
 373 gmx_wheel(int argc, char *argv[]);
 374
 375 GMX_LIBGMXANA_EXPORT
 376 int
 377 gmx_xpm2ps(int argc, char *argv[]);
 378
 379 GMX_LIBGMXANA_EXPORT
 380 int
 381 gmx_membed(int argc, char *argv[]);
 382
 383 GMX_LIBGMXANA_EXPORT
 384 int
 385 gmx_pme_error(int argc, char *argv[]);
 386
 387 GMX_LIBGMXANA_EXPORT
 388 int
 389 gmx_options(int argc, char *argv[]);
 390
 391 GMX_LIBGMXANA_EXPORT
 392 int
 393 gmx_sans(int argc, char *argv[]);
 394
 395 #ifdef __cplusplus
 396 }
 397 #endif
 398
 399 #endif
 400 /* _gmx_ana_h */