Update instructions in containers.rst
[gromacs.git] / src / programs / view / filter.cpp
blob3064c79de79dd5d069de694146be795a8223869b
1 /*
2 * This file is part of the GROMACS molecular simulation package.
4 * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
5 * Copyright (c) 2001-2013, The GROMACS development team.
6 * Copyright (c) 2013,2014,2015,2017,2019, by the GROMACS development team, led by
7 * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
8 * and including many others, as listed in the AUTHORS file in the
9 * top-level source directory and at http://www.gromacs.org.
11 * GROMACS is free software; you can redistribute it and/or
12 * modify it under the terms of the GNU Lesser General Public License
13 * as published by the Free Software Foundation; either version 2.1
14 * of the License, or (at your option) any later version.
16 * GROMACS is distributed in the hope that it will be useful,
17 * but WITHOUT ANY WARRANTY; without even the implied warranty of
18 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
19 * Lesser General Public License for more details.
21 * You should have received a copy of the GNU Lesser General Public
22 * License along with GROMACS; if not, see
23 * http://www.gnu.org/licenses, or write to the Free Software Foundation,
24 * Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
26 * If you want to redistribute modifications to GROMACS, please
27 * consider that scientific software is very special. Version
28 * control is crucial - bugs must be traceable. We will be happy to
29 * consider code for inclusion in the official distribution, but
30 * derived work must not be called official GROMACS. Details are found
31 * in the README & COPYING files - if they are missing, get the
32 * official version at http://www.gromacs.org.
34 * To help us fund GROMACS development, we humbly ask that you cite
35 * the research papers on the package. Check out http://www.gromacs.org.
37 #include "gmxpre.h"
39 #include <cstdio>
40 #include <cstring>
42 #include <algorithm>
44 #include "gromacs/topology/index.h"
45 #include "gromacs/utility/cstringutil.h"
46 #include "gromacs/utility/dir_separator.h"
47 #include "gromacs/utility/fatalerror.h"
48 #include "gromacs/utility/futil.h"
49 #include "gromacs/utility/smalloc.h"
51 #include "dialogs.h"
52 #include "xdlghi.h"
54 t_filter* init_filter(t_atoms* atoms, const char* fn, int natom_trx)
56 t_filter* f;
57 int g, i;
59 snew(f, 1);
60 if (fn != nullptr)
62 f->grps = init_index(fn, &f->grpnames);
64 else
66 snew(f->grps, 1);
67 snew(f->grps->index, 1);
68 analyse(atoms, f->grps, &f->grpnames, false, false);
70 snew(f->bDisable, f->grps->nr);
71 for (g = 0; g < f->grps->nr; g++)
73 for (i = f->grps->index[g]; i < f->grps->index[g + 1] && !f->bDisable[g]; i++)
75 f->bDisable[g] = (f->grps->a[i] >= natom_trx);
79 snew(f->bShow, f->grps->nr);
81 return f;
84 static void FilterCB(t_x11* x11, int dlg_mess, int /*item_id*/, char* set, void* data)
86 int nset;
87 t_filter* f;
88 t_gmx* gmx;
89 t_dlg* dlg;
91 gmx = (t_gmx*)data;
92 dlg = gmx->dlgs[edFilter];
93 f = gmx->filter;
95 #ifdef DEBUG
96 std::printf("item_id: %d, set: %s\n", item_id, set);
97 #endif
98 switch (dlg_mess)
100 case DLG_SET:
101 if (set)
103 if (sscanf(set, "%10d", &nset) == 1)
105 f->bShow[nset] = !f->bShow[nset];
108 break;
109 case DLG_EXIT:
110 HideDlg(dlg);
111 write_gmx(x11, gmx, IDDOFILTER);
112 break;
116 t_dlg* select_filter(t_x11* x11, t_gmx* gmx)
118 static const char* title = "Group";
119 static const char* dummy = "\"FALSE\"";
120 static const char* ok = "\"Ok\"";
121 FILE* tmp;
122 t_dlg* dlg;
123 char tmpfile[STRLEN];
124 int i, j, k, len, tlen, ht, ncol, nrow, x0;
126 len = std::strlen(title);
127 for (i = 0; (i < (int)gmx->filter->grps->nr); i++)
129 len = std::max(len, static_cast<int>(std::strlen(gmx->filter->grpnames[i])));
131 len += 2;
133 ncol = 1 + (gmx->filter->grps->nr / 15);
134 nrow = gmx->filter->grps->nr / ncol;
135 if (nrow * ncol < gmx->filter->grps->nr)
137 nrow++;
139 if (ncol > 1)
141 ht = 1 + (nrow + 1) * 2 + 3;
143 else
145 ht = 1 + (gmx->filter->grps->nr + 1) * 2 + 3;
147 std::strcpy(tmpfile, "filterXXXXXX");
148 tmp = gmx_fopen_temporary(tmpfile);
149 #ifdef DEBUG
150 std::fprintf(stderr, "file: %s\n", tmpfile);
151 #endif
152 tlen = 1 + ncol * (1 + len);
153 std::fprintf(tmp, "grid %d %d {\n\n", tlen, ht);
155 for (k = j = 0, x0 = 1; (j < ncol); j++, x0 += len + 1)
157 std::fprintf(tmp, "group \"%s-%d\" %d 1 %d %d {\n", title, j + 1, x0, len, ht - 5);
158 for (i = 0; (i < nrow) && (k < gmx->filter->grps->nr); i++, k++)
160 if (!gmx->filter->bDisable[k])
162 std::fprintf(tmp, "checkbox \"%s\" \"%d\" %s %s %s\n", gmx->filter->grpnames[k], k,
163 dummy, dummy, dummy);
165 else
167 std::fprintf(tmp, "statictext { \" %s\" } \"%d\" %s %s %s\n",
168 gmx->filter->grpnames[k], k, dummy, dummy, dummy);
171 std::fprintf(tmp, "}\n\n");
173 std::fprintf(tmp, "simple 1 %d %d 2 {\n", ht - 3, tlen - 2);
174 std::fprintf(tmp, "defbutton %s %s %s %s %s\n", ok, ok, dummy, dummy, dummy);
175 std::fprintf(tmp, "}\n\n}\n");
176 gmx_ffclose(tmp);
178 dlg = ReadDlg(x11, gmx->wd->self, title, tmpfile, 0, 0, true, false, FilterCB, gmx);
180 std::remove(tmpfile);
182 return dlg;