Add gmx convert-trj
[gromacs.git] / src / gromacs / ewald / ewald.h
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1 /*
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37 /*! \libinternal \defgroup module_ewald Ewald-family treatments of long-ranged forces
38 * \ingroup group_mdrun
40 * \brief Computes energies and forces for long-ranged interactions
41 * using the Ewald decomposition. Includes plain Ewald, PME, P3M for
42 * Coulomb, PME for Lennard-Jones, load-balancing for PME, and
43 * supporting code.
45 * \author Berk Hess <hess@kth.se>
46 * \author Erik Lindahl <erik@kth.se>
47 * \author Roland Schulz <roland@rschulz.eu>
48 * \author Mark Abraham <mark.j.abraham@gmail.com>
49 * \author Christan Wennberg <cwennberg@kth.se>
52 /*! \libinternal \file
54 * \brief This file contains function declarations necessary for
55 * computing energies and forces for the plain-Ewald long-ranged part,
56 * and the correction for overall system charge for all Ewald-family
57 * methods.
59 * \author David van der Spoel <david.vanderspoel@icm.uu.se>
60 * \author Mark Abraham <mark.j.abraham@gmail.com>
61 * \inlibraryapi
62 * \ingroup module_ewald
65 #ifndef GMX_EWALD_EWALD_H
66 #define GMX_EWALD_EWALD_H
68 #include <stdio.h>
70 #include "gromacs/math/vectypes.h"
71 #include "gromacs/utility/real.h"
73 struct t_commrec;
74 struct t_forcerec;
75 struct t_inputrec;
77 /* Forward declaration of type for managing Ewald tables */
78 struct gmx_ewald_tab_t;
80 /*! \brief Initialize the tables used in the Ewald long-ranged part */
81 void
82 init_ewald_tab(struct gmx_ewald_tab_t **et, const t_inputrec *ir,
83 FILE *fp);
85 /*! \brief Do the long-ranged part of an Ewald calculation */
86 real
87 do_ewald(const t_inputrec *ir,
88 const rvec x[],
89 rvec f[],
90 const real chargeA[],
91 const real chargeB[],
92 const matrix box,
93 const t_commrec *cr,
94 int natoms,
95 matrix lrvir,
96 real ewaldcoeff,
97 real lambda,
98 real *dvdlambda,
99 gmx_ewald_tab_t *et);
101 /*! \brief Calculate the correction to the Ewald sum, due to a net system
102 * charge.
104 * Should only be called on one thread. */
105 real
106 ewald_charge_correction(const t_commrec *cr,
107 const t_forcerec *fr,
108 real lambda,
109 const matrix box,
110 real *dvdlambda,
111 tensor vir);
113 #endif