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HEAD
Removed HIS1 from oplsaa and charmm definitions
[gromacs/AngularHB.git]
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oplsaa.ff
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aminoacids.hdb
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5d2205fb3b58a694e7499fa005b2a96f19e99735
1
ACE 1
2
3 4 HH3 CH3 C O
3
AIB 3
4
1 1 H N -C CA
5
3 4 HB1 CB1 CA N
6
3 4 HB2 CB2 CA N
7
ALA 3
8
1 1 H N -C CA
9
1 5 HA CA N C CB
10
3 4 HB CB CA N
11
ARG 8
12
1 1 H N -C CA
13
1 5 HA CA N C CB
14
2 6 HB CB CG CA
15
2 6 HG CG CD CB
16
2 6 HD CD NE CG
17
1 1 HE NE CD CZ
18
2 3 HH1 NH1 CZ NE
19
2 3 HH2 NH2 CZ NE
20
ARGN 8
21
1 1 H N -C CA
22
1 5 HA CA N C CB
23
2 6 HB CB CG CA
24
2 6 HG CG CD CB
25
2 6 HD CD NE CG
26
1 1 HE NE CD CZ
27
1 2 HH1 NH1 CZ NE
28
2 3 HH2 NH2 CZ NE
29
ASN 4
30
1 1 H N -C CA
31
1 5 HA CA N C CB
32
2 6 HB CB CG CA
33
2 3 HD2 ND2 CG CB
34
ASP 3
35
1 1 H N -C CA
36
1 5 HA CA N C CB
37
2 6 HB CB CG CA
38
ASPH 4
39
1 1 H N -C CA
40
1 5 HA CA N C CB
41
2 6 HB CB CG CA
42
1 2 HD2 OD2 CG CB
43
CYS2 3
44
1 1 H N -C CA
45
1 5 HA CA N C CB
46
2 6 HB CB SG CA
47
CYSH 4
48
1 1 H N -C CA
49
1 5 HA CA N C CB
50
2 6 HB CB SG CA
51
1 2 HG SG CB CA
52
GLN 5
53
1 1 H N -C CA
54
1 5 HA CA N C CB
55
2 6 HB CB CG CA
56
2 6 HG CG CD CB
57
2 3 HE2 NE2 CD CG
58
QLN 6
59
1 1 H N -C CA
60
1 5 HA CA N C CB
61
2 6 HB CB CG CA
62
2 6 HG CG CD CB
63
2 3 HE2 NE2 CD CG
64
1 3 HE1 OE1 CD CG
65
GLU 4
66
1 1 H N -C CA
67
1 5 HA CA N C CB
68
2 6 HB CB CG CA
69
2 6 HG CG CD CB
70
PGLU 4
71
1 1 H N CD CA
72
1 5 HA CA N C CB
73
2 6 HB CB CG CA
74
2 6 HG CG CD CB
75
GLUH 5
76
1 1 H N -C CA
77
1 5 HA CA N C CB
78
2 6 HB CB CG CA
79
2 6 HG CG CD CB
80
1 2 HE2 OE2 CD CG
81
GLY 2
82
1 1 H N -C CA
83
2 6 HA CA C N
84
HISD 6
85
1 1 H N -C CA
86
1 5 HA CA N C CB
87
2 6 HB CB CG CA
88
1 1 HD2 CD2 CG NE2
89
1 1 HE1 CE1 ND1 NE2
90
1 1 HD1 ND1 CG CE1
91
HISE 6
92
1 1 H N -C CA
93
2 6 HB CB CG CA
94
1 5 HA CA N C CB
95
1 1 HE2 NE2 CE1 CD2
96
1 1 HD2 CD2 CG NE2
97
1 1 HE1 CE1 ND1 NE2
98
HISH 7
99
1 1 H N -C CA
100
1 5 HA CA N C CB
101
2 6 HB CB CG CA
102
1 1 HD2 CD2 CG NE2
103
1 1 HE1 CE1 ND1 NE2
104
1 1 HD1 ND1 CG CE1
105
1 1 HE2 NE2 CE1 CD2
106
HO4 1
107
3 10 HW OW
108
HO5 1
109
4 11 HW OW
110
HOH 1
111
2 7 HW OW
112
ILE 6
113
1 1 H N -C CA
114
1 5 HA CA N C CB
115
1 5 HB CB CA CG1 CG2
116
2 6 HG1 CG1 CD CB
117
3 4 HG2 CG2 CB CA
118
3 4 HD CD CG1 CB
119
LEU 6
120
1 1 H N -C CA
121
1 5 HA CA N C CB
122
2 6 HB CB CG CA
123
1 5 HG CG CB CD1 CD2
124
3 4 HD1 CD1 CG CB
125
3 4 HD2 CD2 CG CB
126
LYS 7
127
1 1 H N -C CA
128
1 5 HA CA N C CB
129
2 6 HB CB CG CA
130
2 6 HG CG CD CB
131
2 6 HD CD CE CG
132
2 6 HE CE NZ CD
133
2 4 HZ NZ CE CD
134
LYSH 7
135
1 1 H N -C CA
136
1 5 HA CA N C CB
137
2 6 HB CB CG CA
138
2 6 HG CG CD CB
139
2 6 HD CD CE CG
140
2 6 HE CE NZ CD
141
3 4 HZ NZ CE CD
142
MET 5
143
1 1 H N -C CA
144
1 5 HA CA N C CB
145
2 6 HB CB CG CA
146
2 6 HG CG SD CB
147
3 4 HE CE SD CG
148
NAC 2
149
1 1 H N -C CH3
150
3 4 HH3 CH3 N -C
151
NH2 1
152
2 3 H N -C -CA
153
NHE 1
154
2 3 H N -C -CA
155
PHE 8
156
1 1 H N -C CA
157
1 5 HA CA N C CB
158
2 6 HB CB CG CA
159
1 1 HD1 CD1 CG CE1
160
1 1 HD2 CD2 CG CE2
161
1 1 HE1 CE1 CD1 CZ
162
1 1 HE2 CE2 CD2 CZ
163
1 1 HZ CZ CE1 CE2
164
PRO 4
165
1 5 HA CA N C CB
166
2 6 HB CB CG CA
167
2 6 HG CG CD CB
168
2 6 HD CD N CG
169
SER 4
170
1 1 H N -C CA
171
1 5 HA CA N C CB
172
2 6 HB CB OG CA
173
1 2 HG OG CB CA
174
THR 5
175
1 1 H N -C CA
176
1 5 HA CA N C CB
177
1 5 HB CB CA OG1 CG2
178
1 2 HG1 OG1 CB CA
179
3 4 HG2 CG2 CB CA
180
TRP 9
181
1 1 H N -C CA
182
1 5 HA CA N C CB
183
2 6 HB CB CG CA
184
1 1 HD1 CD1 NE1 CG
185
1 1 HE1 NE1 CD1 CE2
186
1 1 HE3 CE3 CD2 CZ3
187
1 1 HZ3 CZ3 CE3 CH2
188
1 1 HH2 CH2 CZ3 CZ2
189
1 1 HZ2 CZ2 CE2 CH2
190
TYR 8
191
1 1 H N -C CA
192
1 5 HA CA N C CB
193
2 6 HB CB CG CA
194
1 1 HD1 CD1 CG CE1
195
1 1 HD2 CD2 CG CE2
196
1 1 HE1 CE1 CD1 CZ
197
1 1 HE2 CE2 CD2 CZ
198
1 2 HH OH CZ CE1
199
VAL 5
200
1 1 H N -C CA
201
1 5 HA CA N C CB
202
1 5 HB CB CA CG1 CG2
203
3 4 HG1 CG1 CB CA
204
3 4 HG2 CG2 CB CA
205
DMSO 2
206
3 4 HD1 CD1 SD OD
207
3 4 HD2 CD2 SD OD