docs/doxygen/suppressions.txt

   1 # The script is currently a bit too eager
   2 share/template/template.cpp: error: source file documentation appears outside full documentation
   3 # The parser in the script is not clever enough
   4 src/gromacs/version.h: warning: includes local file as <gromacs/version.h>
   5
   6 # These are OK
   7 src/gromacs/linearalgebra/eigensolver.cpp: warning: should include "config.h"
   8 src/gromacs/linearalgebra/gmx_arpack.cpp: warning: should include "config.h"
   9 src/gromacs/linearalgebra/gmx_blas/*: warning: does not include "gmxpre.h" first
  10 src/gromacs/linearalgebra/gmx_blas/*: warning: should include "config.h"
  11 src/gromacs/linearalgebra/gmx_lapack/*: warning: does not include "gmxpre.h" first
  12 src/gromacs/linearalgebra/gmx_lapack/*: warning: should include "config.h"
  13 src/gromacs/utility/baseversion-gen.c: warning: does not include "gmxpre.h" first
  14
  15 # Exclude header files that are used for inlining code; the responsibility for
  16 # making the right #includes should be on the source file that uses these.
  17 # TODO: # Stop using the preprocessor for meta-programming!
  18 src/gromacs/ewald/pme-simd4.h: warning: should include "pme-simd.h"
  19 src/gromacs/ewald/pme-gather.cpp: warning: includes "simd.h" unnecessarily
  20 src/gromacs/ewald/pme-spline-work.cpp: warning: includes "simd.h" unnecessarily
  21 src/gromacs/ewald/pme-spline-work.h: warning: includes "simd.h" unnecessarily
  22 src/gromacs/ewald/pme-spread.cpp: warning: includes "simd.h" unnecessarily
  23 src/gromacs/gmxlib/nonbonded/nb_kernel_sparc64_hpc_ace_double/kernelutil_sparc64_hpc_ace_double.h: warning: includes "simd.h" unnecessarily
  24 src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_inner.h: warning: should include "simd.h"
  25 src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_outer.h: warning: should include "simd.h"
  26 src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_inner.h: warning: should include "simd.h"
  27 src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_outer.h: warning: should include "simd.h"
  28 src/gromacs/mdlib/nbnxn_search_simd_2xnn.h: warning: should include "simd.h"
  29 src/gromacs/mdlib/nbnxn_search_simd_4xn.h: warning: should include "simd.h"
  30
  31 # There's no decision yet on how to name and organize modules of functionality
  32 # specific to mdrun
  33 : error: no matching directory for module: module_mdrun
  34
  35 # This module name doesn't really fall into any currently used pattern; needs some thought
  36 : error: no matching directory for module: module_mdrun_integration_tests
  37
  38 # These would be nice to fix, but can wait for later / deletion / rewrites
  39 src/gromacs/gmxlib/nonbonded/nb_kernel_*/*: warning: includes "config.h" unnecessarily
  40 src/gromacs/gmxlib/nonbonded/nb_kernel_sparc64_hpc_ace_double/kernelutil_sparc64_hpc_ace_double.h: warning: should include "config.h"
  41 src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp: warning: includes "config.h" unnecessarily
  42 src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp: warning: includes "config.h" unnecessarily
  43 src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.cpp: warning: includes "config.h" unnecessarily
  44 src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_common.h: warning: should include "config.h"
  45 src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_common.h: warning: should include "nbnxn_simd.h"
  46 src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.cpp: warning: includes "config.h" unnecessarily
  47 src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_common.h: warning: should include "nbnxn_simd.h"
  48
  49 # Temporary while we change the SIMD implementation
  50 src/gromacs/simd/impl_sparc64_hpc_ace/impl_sparc64_hpc_ace_common.h: warning: should include "simd.h"
  51
  52 src/gromacs/simd/tests/scalar.cpp: warning: includes "simd.h" unnecessarily
  53 src/gromacs/simd/tests/scalar_math.cpp: warning: includes "simd.h" unnecessarily
  54 src/gromacs/simd/tests/scalar_util.cpp: warning: includes "simd.h" unnecessarily
  55
  56 # These are specific to Folding@Home, and easiest to suppress here
  57 *: warning: includes non-local file as "corewrap.h"
  58 src/gmxpre.h: warning: includes non-local file as "swindirect.h"