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11 <td ALIGN=LEFT VALIGN=TOP WIDTH=280><br><h2>g_xrama</h2><font size=-1><A HREF="../online.html">Main Table of Contents</A></font><br><br></td>
12 </TABLE></TD><TD WIDTH="*" ALIGN=RIGHT VALIGN=BOTTOM><p><B>VERSION 4.5<br>
13 Thu 26 Aug 2010</B></td></tr></TABLE>
14 <HR>
15 <H3>Description</H3>
16 <p>
17 <a href="xrama.html">xrama</a> shows a Ramachandran movie, that is, it shows
18 the Phi/Psi angles as a function of time in an X-Window.<p>Static Phi/Psi plots for printing can be made with <a href="g_rama.html">g_rama</a>.<p>
19 Some of the more common X command line options can be used:<br>
20 -bg, -fg change colors, -font fontname, changes the font.
21 <P>
22 <H3>Files</H3>
23 <TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2>
24 <TR><TH>option</TH><TH>filename</TH><TH>type</TH><TH>description</TH></TR>
25 <TR><TD ALIGN=RIGHT> <b><tt>-f</tt></b> </TD><TD ALIGN=RIGHT> <tt><a href="files.html"> traj.xtc</a></tt> </TD><TD> Input </TD><TD> Trajectory: <a href="xtc.html">xtc</a> <a href="trr.html">trr</a> <a href="trj.html">trj</a> <a href="gro.html">gro</a> <a href="g96.html">g96</a> <a href="pdb.html">pdb</a> cpt </TD></TR>
26 <TR><TD ALIGN=RIGHT> <b><tt>-s</tt></b> </TD><TD ALIGN=RIGHT> <tt><a href="files.html"> topol.tpr</a></tt> </TD><TD> Input </TD><TD> Run input file: <a href="tpr.html">tpr</a> <a href="tpb.html">tpb</a> <a href="tpa.html">tpa</a> </TD></TR>
27 </TABLE>
28 <P>
29 <H3>Other options</H3>
30 <TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2>
31 <TR><TH>option</TH><TH>type</TH><TH>default</TH><TH>description</TH></TR>
32 <TR><TD ALIGN=RIGHT> <b><tt>-[no]h</tt></b> </TD><TD ALIGN=RIGHT> gmx_bool </TD><TD ALIGN=RIGHT> <tt>no </tt> </TD><TD> Print help info and quit </TD></TD>
33 <TR><TD ALIGN=RIGHT> <b><tt>-[no]version</tt></b> </TD><TD ALIGN=RIGHT> gmx_bool </TD><TD ALIGN=RIGHT> <tt>no </tt> </TD><TD> Print version info and quit </TD></TD>
34 <TR><TD ALIGN=RIGHT> <b><tt>-nice</tt></b> </TD><TD ALIGN=RIGHT> int </TD><TD ALIGN=RIGHT> <tt>0</tt> </TD><TD> Set the nicelevel </TD></TD>
35 <TR><TD ALIGN=RIGHT> <b><tt>-b</tt></b> </TD><TD ALIGN=RIGHT> time </TD><TD ALIGN=RIGHT> <tt>0 </tt> </TD><TD> First frame (ps) to read from trajectory </TD></TD>
36 <TR><TD ALIGN=RIGHT> <b><tt>-e</tt></b> </TD><TD ALIGN=RIGHT> time </TD><TD ALIGN=RIGHT> <tt>0 </tt> </TD><TD> Last frame (ps) to read from trajectory </TD></TD>
37 <TR><TD ALIGN=RIGHT> <b><tt>-dt</tt></b> </TD><TD ALIGN=RIGHT> time </TD><TD ALIGN=RIGHT> <tt>0 </tt> </TD><TD> Only use frame when t MOD dt = first time (ps) </TD></TD>
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42 <font size="-1"><a href="http://www.gromacs.org">http://www.gromacs.org</a></font><br>
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