src/kernel/CMakeLists.txt

   1
   2 set(GMXPREPROCESS_SOURCES
   3     add_par.c
   4     compute_io.c
   5     convparm.c
   6     gen_ad.c
   7     gen_vsite.c
   8     genhydro.c
   9     gpp_atomtype.c
  10     gpp_bond_atomtype.c
  11     h_db.c
  12     hackblock.c
  13     hizzie.c
  14     nm2type.c
  15     pdb2top.c
  16     pgutil.c
  17     readir.c
  18     readpull.c
  19     resall.c
  20     sorting.c
  21     specbond.c
  22     ter_db.c
  23     tomorse.c
  24     topdirs.c
  25     topexcl.c
  26     topio.c
  27     toppush.c
  28     topshake.c
  29     toputil.c
  30     tpbcmp.c
  31     vsite_parm.c
  32     fflibutil.c
  33     xlate.c)
  34
  35 set(MDRUN_SOURCES
  36     gctio.c    ionize.c runner.c
  37     do_gct.c     repl_ex.c  xutils.c
  38     md.c         mdrun.c    genalg.c md_openmm.c)
  39
  40 add_library(gmxpreprocess ${GMXPREPROCESS_SOURCES})
  41 target_link_libraries(gmxpreprocess md)
  42
  43 if(GMX_OPENMM)
  44     add_subdirectory(gmx_gpu_utils)
  45     include_directories(./gmx_gpu_utils ${OpenMM_INCLUDE_DIR})
  46     link_directories(${OpenMM_LIBRARY_DIR})
  47     # only define if this is a local build not a release
  48     # we assume that the auto-generated version is not used &&
  49     # version string does not contain "-dev" => it's a release build
  50     if(NOT USE_VERSION_H AND NOT PROJECT_VERSION MATCHES ".*-dev.*")
  51         add_definitions( -DOPENMM_PLUGIN_DIR="${OpenMM_PLUGIN_DIR}" )
  52     else()
  53         add_definitions( -DOPENMM_PLUGIN_DIR="" )
  54     endif()
  55     add_library(openmm_api_wrapper openmm_wrapper.cpp)
  56 #    remove_definitions( -DOPENMM_PLUGIN_DIR="${OpenMM_PLUGIN_DIR}" )  # TODO where should this go?!
  57     set(GMX_OPENMM_LIBRARIES openmm_api_wrapper gmx_gpu_utils OpenMM)
  58     install(TARGETS openmm_api_wrapper DESTINATION ${LIB_INSTALL_DIR})
  59 endif(GMX_OPENMM)
  60
  61 if(GMX_FAHCORE)
  62   add_library(fahcore ${MDRUN_SOURCES})
  63 else(GMX_FAHCORE)
  64
  65 list(APPEND GMX_EXTRA_LIBRARIES gmxpreprocess md)
  66
  67 add_executable(grompp grompp.c)
  68 target_link_libraries(grompp ${GMX_EXTRA_LIBRARIES})
  69
  70 add_executable(tpbconv tpbconv.c)
  71 target_link_libraries(tpbconv ${GMX_EXTRA_LIBRARIES})
  72
  73 add_executable(pdb2gmx pdb2gmx.c)
  74 target_link_libraries(pdb2gmx ${GMX_EXTRA_LIBRARIES})
  75
  76 add_executable(protonate protonate.c)
  77 target_link_libraries(protonate ${GMX_EXTRA_LIBRARIES})
  78
  79 add_executable(luck luck.c)
  80 target_link_libraries(luck ${GMX_EXTRA_LIBRARIES})
  81
  82 add_executable(gmxdump gmxdump.c)
  83 target_link_libraries(gmxdump ${GMX_EXTRA_LIBRARIES})
  84
  85 add_executable(x2top x2top.c)
  86 target_link_libraries(x2top ${GMX_EXTRA_LIBRARIES})
  87
  88 add_executable(gmxcheck gmxcheck.c)
  89 target_link_libraries(gmxcheck ${GMX_EXTRA_LIBRARIES})
  90
  91 add_executable(mdrun ${MDRUN_SOURCES})
  92 target_link_libraries(mdrun ${GMX_EXTRA_LIBRARIES} ${GMX_OPENMM_LIBRARIES})
  93 # this is to circumvent the following MSVC error:
  94 # warning LNK4098: defaultlib 'LIBCMT' conflicts with use of other libs
  95 # fatal error LNK1169: one or more multiply defined symbols found
  96 if(GMX_OPENMM AND MSVC)
  97     set_target_properties(mdrun PROPERTIES LINK_FLAGS "/NODEFAULTLIB:LBCMT")
  98 endif()
  99
 100 install(TARGETS
 101         grompp
 102         tpbconv
 103         pdb2gmx
 104         protonate
 105         luck
 106         gmxdump
 107         x2top
 108         gmxcheck
 109         mdrun
 110         gmxpreprocess DESTINATION ${LIB_INSTALL_DIR}
 111         RUNTIME DESTINATION ${BIN_INSTALL_DIR})
 112
 113 endif(GMX_FAHCORE)
 114