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7 * GROningen MAchine for Chemical Simulations
10 * Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
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33 * Gyas ROwers Mature At Cryogenic Speed
47 /* Some window sizes */
53 typedef enum { eOSingle
, eOBond
, eOHBond
, eONR
} eObject
;
55 typedef enum { eVNormal
, eVSpecial
, eVHidden
, evNR
} eVisible
;
57 enum { eBThin
, eBFat
, eBVeryFat
, eBSpheres
, eBNR
};
59 enum { esbNone
, esbRect
, esbTri
, esbTrunc
, esbNR
};
62 t_windata wd
; /* Mol window structure */
63 bool bShowHydrogen
; /* Show Hydrogens? */
64 int bond_type
; /* Show one of the above bondtypes */
65 int ePBC
; /* PBC type */
66 int boxtype
; /* Rectangular, Tric, TruncOct (display)*/
67 int realbox
; /* Property of the real box */
71 eObject eO
; /* The type of object */
72 eVisible eV
; /* Visibility status of the object */
73 unsigned long color
; /* The color (only when eV==evSpecial) */
74 atom_id ai
,aj
; /* The atom_id for i (and j if bond) */
75 real z
; /* The Z-coordinate for depht cueing */
79 t_blocka
*grps
; /* Blocks with atom numbers */
80 char **grpnames
; /* The names of the groups */
81 bool *bDisable
; /* Group indexes out of natoms in TRX */
82 bool *bShow
; /* Show a group ? */
86 * t_manager structure:
88 * This structure manages the display area for the gmx program.
89 * It reads the status file and sends messages when windows need to
96 int natom
; /* The number of atoms */
97 t_topology top
; /* topology */
99 real time
; /* The actual time */
100 rvec
*x
; /* The coordinates */
101 iv2
*ix
; /* The coordinates after projection */
102 real
*zz
; /* Z-coords */
103 matrix box
; /* The box */
104 int nobj
; /* The number of objects */
105 t_object
*obj
; /* The objects on screen */
106 bool *bHydro
; /* TRUE for hydrogen atoms */
107 bool *bLabel
; /* Show a label on atom i? */
108 char **szLab
; /* Array of pointers to labels */
109 unsigned long *col
; /* The colour of the atoms */
110 int *size
; /* The size of the atoms */
111 real
*vdw
; /* The VDWaals radius of the atoms */
112 bool *bVis
; /* visibility of atoms */
113 bool bPbc
; /* Remove Periodic boundary */
114 bool bAnimate
; /* Animation going on? */
115 bool bEof
; /* End of file reached? */
116 bool bStop
; /* Stopped by user? */
117 bool bSort
; /* Sort the coordinates */
118 bool bPlus
; /* Draw plus for single atom */
119 int nSkip
; /* Skip n steps after each frame */
120 int nWait
; /* Wait n ms after each frame */
122 t_windata wd
; /* The manager subwindow */
123 t_windata title
; /* Title window */
124 t_3dview
*view
; /* The 3d struct */
125 t_molwin
*molw
; /* The molecule window */
126 t_butbox
*vbox
; /* The video box */
127 t_butbox
*bbox
; /* The button box */
128 t_legendwin
*legw
; /* The legend window */
130 output_env_t oenv
; /* output env data */
133 extern t_manager
*init_man(t_x11
*x11
,Window Parent
,
134 int x
,int y
,int width
,int height
,
135 unsigned long fg
,unsigned long bg
,
136 int ePBC
,matrix box
, const output_env_t oenv
);
137 /* Initiate the display manager */
139 extern void move_man(t_x11
*x11
,t_manager
*man
,int width
,int height
);
140 /* Set the right size for this window */
142 extern void step_message(t_x11
*x11
,t_manager
*man
);
143 /* Send a message to the manager */
145 extern void set_file(t_x11
*x11
,t_manager
*man
,const char *trajectory
,
147 /* Read a new trajectory and topology */
149 extern void map_man(t_x11
*x11
,t_manager
*man
);
151 extern void move_man(t_x11
*x11
,t_manager
*man
,int width
,int height
);
153 extern bool toggle_animate (t_x11
*x11
,t_manager
*man
);
155 extern bool toggle_pbc (t_manager
*man
);
157 extern void no_labels(t_x11
*x11
,t_manager
*man
);
158 /* Turn off all labels */
160 extern void done_man(t_x11
*x11
,t_manager
*man
);
161 /* Clean up man struct */
163 extern void draw_mol(t_x11
*x11
,t_manager
*man
);
165 extern void create_visibility(t_manager
*man
);
167 extern void do_filter(t_x11
*x11
,t_manager
*man
,t_filter
*filter
);