Fix saving lists of arrays with recent versions of numpy
[qpms.git] / qpms / ewald.c
bloba6358b601b53e829ec90491f9a4a41c5b48af889
1 #include "ewald.h"
2 #include <stdlib.h>
3 #include "indexing.h"
4 #include "kahansum.h"
5 #include <assert.h>
6 #include <string.h>
7 #include <complex.h>
8 #include "tiny_inlines.h"
9 #include "qpms_error.h"
10 #include <gsl/gsl_integration.h>
11 #include <gsl/gsl_errno.h>
12 #include <gsl/gsl_sf_legendre.h>
13 #include <gsl/gsl_sf_expint.h>
15 // parameters for the quadrature of integral in (4.6)
16 #ifndef INTEGRATION_WORKSPACE_LIMIT
17 #define INTEGRATION_WORKSPACE_LIMIT 30000
18 #endif
20 #ifndef INTEGRATION_EPSABS
21 #define INTEGRATION_EPSABS 1e-13
22 #endif
24 #ifndef INTEGRATION_EPSREL
25 #define INTEGRATION_EPSREL 1e-13
26 #endif
28 #ifndef M_SQRTPI
29 #define M_SQRTPI 1.7724538509055160272981674833411452L
30 #endif
33 // sloppy implementation of factorial
34 // We prefer to avoid tgamma/lgamma, as their errors are about 4+ bits
35 static inline double factorial(const int n) {
36 assert(n >= 0);
37 if (n < 0)
38 return 0; // should not happen in the functions below. (Therefore the assert above)
39 else if (n <= 20) {
40 double fac = 1;
41 for (int i = 1; i <= n; ++i)
42 fac *= i;
43 return fac;
45 else
46 return tgamma(n + 1); // hope it's precise and that overflow does not happen
49 // sloppy implementation of double factorial n!!
50 static inline double double_factorial(int n) {
51 assert(n >= 0);
52 if (n <= 25) {
53 double fac = 1;
54 while (n > 0) {
55 fac *= n;
56 n -= 2;
58 return fac;
59 } else {
60 if (n % 2) { // odd, (2*k - 1)!! = 2**k * Γ(k + 0.5) / sqrt(п)
61 const int k = n / 2 + 1;
62 return pow(2, k) * tgamma(k + 0.5) / M_SQRTPI;
63 } else { // even, n!! = 2**(n/2) * (n/2)!
64 const int k = n/2;
65 return pow(2, k) * factorial(k);
70 // sloppy implementation of (n/2)! = Γ(n/2 + 1)
71 // It is _slightly_ more precise than direct call of tgamma for small odd n
72 static inline double factorial_of_half(const int n2) {
73 assert(n2 >= 0);
74 if (n2 % 2 == 0) return factorial(n2/2);
75 else {
76 if (n2 <= 50) { // odd, use (k - 0.5)! = Γ(k + 0.5) = 2**(-k) (2*k - 1)!! sqrt(п) for small n2
77 const int k = n2 / 2 + 1;
78 double fac2 = 1;
79 for(int j = 2*k - 1; j > 0; j -= 2)
80 fac2 *= j;
81 return fac2 * pow(2, -k) * M_SQRTPI;
83 else return tgamma(1. + 0.5*n2);
87 static inline complex double csq(complex double x) { return x * x; }
88 static inline double sq(double x) { return x * x; }
90 /// Metadata describing the normalisation conventions used in ewald32_constants_t.
91 typedef enum {
92 EWALD32_CONSTANTS_ORIG, // As in [1, (4,5)], NOT USED right now.
93 EWALD32_CONSTANTS_AGNOSTIC /* Not depending on the spherical harmonic sign/normalisation
94 * convention – the $e^{im\alpha_pq}$ term in [1,(4.5)] being
95 * replaced by the respective $Y_n^m(\pi/2,\alpha)$
96 * spherical harmonic. See notes/ewald.lyx.
99 } ewald3_constants_option;
101 // TODO perhaps rewrite everything as agnostic.
102 static const ewald3_constants_option type = EWALD32_CONSTANTS_AGNOSTIC;
104 qpms_ewald3_constants_t *qpms_ewald3_constants_init(const qpms_l_t lMax /*, const ewald3_constants_option type */,
105 const int csphase)
107 qpms_ewald3_constants_t *c = malloc(sizeof(qpms_ewald3_constants_t));
108 //if (c == NULL) return NULL; // Do I really want to do this?
109 c->lMax = lMax;
110 c->nelem_sc = qpms_lMax2nelem_sc(lMax);
111 c->s1_jMaxes = malloc(c->nelem_sc * sizeof(qpms_l_t));
112 c->s1_constfacs = malloc(c->nelem_sc * sizeof(complex double *));
113 //if (c->s1_jMaxes == NULL) return NULL;
115 // ----- the "xy-plane constants" ------
116 //determine sizes
117 size_t s1_constfacs_sz = 0;
118 for (qpms_y_t y = 0; y < c->nelem_sc; ++y) {
119 qpms_l_t n; qpms_m_t m; qpms_y2mn_sc_p(y, &m, &n);
120 if ((m + n) % 2 == 0)
121 s1_constfacs_sz += 1 + (c->s1_jMaxes[y] = (n-abs(m))/2);
122 else
123 c->s1_jMaxes[y] = -1;
126 c->s1_constfacs_base = malloc(s1_constfacs_sz * sizeof(complex double));
127 size_t s1_constfacs_sz_cumsum = 0;
128 for (qpms_y_t y = 0; y < c->nelem_sc; ++y) {
129 qpms_l_t n; qpms_m_t m; qpms_y2mn_sc_p(y, &m, &n);
130 if ((m + n) % 2 == 0) {
131 c->s1_constfacs[y] = c->s1_constfacs_base + s1_constfacs_sz_cumsum;
132 // and here comes the actual calculation
133 for (qpms_l_t j = 0; j <= c->s1_jMaxes[y]; ++j){
134 switch(type) {
135 case EWALD32_CONSTANTS_ORIG: // NOT USED
136 c->s1_constfacs[y][j] = -0.5 * ipow(n+1) * min1pow((n+m)/2)
137 * sqrt((2*n + 1) * factorial(n-m) * factorial(n+m))
138 * min1pow(j) * pow(0.5, n-2*j)
139 / (factorial(j) * factorial((n-m)/2-j) * factorial((n+m)/2-j))
140 * pow(0.5, 2*j-1);
141 break;
142 case EWALD32_CONSTANTS_AGNOSTIC:
143 c->s1_constfacs[y][j] = -2 * ipow(n+1) * M_SQRTPI
144 * factorial((n-m)/2) * factorial((n+m)/2)
145 * min1pow(j)
146 / (factorial(j) * factorial((n-m)/2-j) * factorial((n+m)/2-j));
147 break;
148 default:
149 QPMS_INVALID_ENUM(type);
152 s1_constfacs_sz_cumsum += 1 + c->s1_jMaxes[y];
154 else
155 c->s1_constfacs[y] = NULL;
158 // ----- New generation 2D-in-3D constants ------
159 // TODO it is not necessary to treat +|m| and -|m| cases separately
160 // N.B. currently, this is only valid for EWALD32_CONSTANTS_AGNOSTIC (NOT CHECKED!)
161 c->S1_constfacs = malloc((1+c->nelem_sc) * sizeof(complex double *));
162 //determine sizes
163 size_t S1_constfacs_sz = 0;
164 for (qpms_y_t y = 0; y < c->nelem_sc; ++y) {
165 qpms_l_t n; qpms_m_t m; qpms_y2mn_sc_p(y, &m, &n);
166 const qpms_l_t L_M = n - abs(m);
167 for(qpms_l_t j = 0; j <= L_M; ++j) { // outer sum
168 // inner sum: j <= s <= min(2*j, n - |m|), s has the same parity as n - |m|
169 for(qpms_l_t s = j + (L_M - j) % 2;
170 (s <= 2 * j) && (s <= L_M);
171 s += 2) {
172 ++S1_constfacs_sz;
177 c->S1_constfacs_base = malloc(S1_constfacs_sz * sizeof(complex double));
178 size_t S1_constfacs_sz_cumsum = 0; // second count
179 for (qpms_y_t y = 0; y < c->nelem_sc; ++y) {
180 qpms_l_t n; qpms_m_t m; qpms_y2mn_sc_p(y, &m, &n);
181 const complex double yfactor = -2 * ipow(n+1) * M_SQRTPI
182 * factorial((n-m)/2) * factorial((n+m)/2);
183 c->S1_constfacs[y] = c->S1_constfacs_base + S1_constfacs_sz_cumsum;
184 size_t coeffs_per_y = 0;
185 const qpms_l_t L_M = n - abs(m);
186 for(qpms_l_t j = 0; j <= L_M; ++j) { // outer sum
187 // inner sum: j <= s <= min(2*j, n - |m|), s has the same parity as n - |m|
188 for(qpms_l_t s = j + (L_M - j) % 2;
189 (s <= 2 * j) && (s <= L_M);
190 s += 2) {
191 c->S1_constfacs_base[S1_constfacs_sz_cumsum] =
192 yfactor * min1pow(j)
193 / factorial(2*j-s) / factorial(s - j)
194 / factorial_of_half(n - m - s) / factorial_of_half(n + m - s);
195 ++S1_constfacs_sz_cumsum;
198 S1_constfacs_sz_cumsum += coeffs_per_y;
200 QPMS_ASSERT(S1_constfacs_sz_cumsum = S1_constfacs_sz);
201 c->S1_constfacs[c->nelem_sc] = c->S1_constfacs_base + S1_constfacs_sz; // For easier limit checks
203 // ------ the "z-axis constants" -----
204 // determine sizes
205 size_t s1_constfacs_1Dz_sz;
207 const qpms_l_t sz_n_lMax = lMax/2 + 1; // number of different j's for n = lMax
208 s1_constfacs_1Dz_sz = (lMax % 2) ? isq(sz_n_lMax) + sz_n_lMax
209 : isq(sz_n_lMax);
211 c->s1_constfacs_1Dz_base = malloc(s1_constfacs_1Dz_sz * sizeof(complex double));
212 c->s1_constfacs_1Dz = malloc((lMax+1)*sizeof(complex double *));
214 size_t s1_constfacs_1Dz_sz_cumsum = 0;
215 for (qpms_l_t n = 0; n <= lMax; ++n) {
216 c->s1_constfacs_1Dz[n] = c->s1_constfacs_1Dz_base + s1_constfacs_1Dz_sz_cumsum;
217 for (qpms_l_t j = 0; j <= n/2; ++j) {
218 switch(type) {
219 case EWALD32_CONSTANTS_AGNOSTIC:
220 c->s1_constfacs_1Dz[n][j] = -ipow(n+1) * min1pow(j) * factorial(n)
221 / (factorial(j) * pow(2, 2*j) * factorial(n - 2*j));
222 break;
223 default:
224 QPMS_INVALID_ENUM(type); // wrong type argument or not implemented
227 s1_constfacs_1Dz_sz_cumsum += 1 + n / 2;
229 assert(s1_constfacs_1Dz_sz == s1_constfacs_1Dz_sz_cumsum);
232 c->legendre_csphase = csphase;
233 c->legendre0 = malloc(gsl_sf_legendre_array_n(lMax) * sizeof(double));
234 c->legendre_plus1 = malloc(gsl_sf_legendre_array_n(lMax) * sizeof(double));
235 c->legendre_minus1 = malloc(gsl_sf_legendre_array_n(lMax) * sizeof(double));
236 // N.B. here I use the GSL_SF_LEGENRE_NONE, in order to be consistent with translations.c
237 c->legendre_normconv = GSL_SF_LEGENDRE_NONE;
238 // Moreover, using this approach (i.e. gsl) takes about 64kB extra memory
239 QPMS_ENSURE_SUCCESS(gsl_sf_legendre_array_e(c->legendre_normconv, lMax, 0, csphase, c->legendre0));
240 QPMS_ENSURE_SUCCESS(gsl_sf_legendre_array_e(c->legendre_normconv, lMax, +1, csphase, c->legendre_plus1));
241 QPMS_ENSURE_SUCCESS(gsl_sf_legendre_array_e(c->legendre_normconv, lMax, -1, csphase, c->legendre_minus1));
242 return c;
245 void qpms_ewald3_constants_free(qpms_ewald3_constants_t *c) {
246 free(c->legendre0);
247 free(c->legendre_plus1);
248 free(c->legendre_minus1);
249 free(c->s1_constfacs);
250 free(c->s1_constfacs_base);
251 free(c->S1_constfacs);
252 free(c->S1_constfacs_base);
253 free(c->s1_constfacs_1Dz_base);
254 free(c->s1_constfacs_1Dz);
255 free(c->s1_jMaxes);
256 free(c);
260 int ewald3_sigma0(complex double *result, double *err,
261 const qpms_ewald3_constants_t *c,
262 const double eta, const complex double k)
264 qpms_csf_result gam;
265 complex double z = -csq(k/(2*eta));
266 QPMS_ENSURE_SUCCESS(complex_gamma_inc_e(-0.5, z,
267 // we take the branch which is principal for the Re z < 0, Im z < 0 quadrant, cf. [Linton, p. 642 in the middle]
268 QPMS_LIKELY(creal(z) < 0) && !signbit(cimag(z)) ? -1 : 0, &gam));
269 *result = gam.val * c->legendre0[gsl_sf_legendre_array_index(0,0)] / 2 / M_SQRTPI;
270 if(err)
271 *err = gam.err * fabs(c->legendre0[gsl_sf_legendre_array_index(0,0)] / 2 / M_SQRTPI);
272 return 0;
275 // Wrapper over cpow to correctly handle the k->0 behaviour
276 static inline complex double cpow_0lim_zi(complex double x, long z)
278 if (x == 0 && z == 0)
279 return 1;
280 else if (x == 0 && z > 0) // lol branch cut in cpow
281 return 0;
282 else
283 return cpow(x, z);
286 int ewald3_21_xy_sigma_long (
287 complex double *target, // must be c->nelem_sc long
288 double *err,
289 const qpms_ewald3_constants_t *c,
290 const double eta, const complex double k,
291 const double unitcell_volume /* with the corresponding lattice dimensionality */,
292 const LatticeDimensionality latdim,
293 PGen *pgen_K, const bool pgen_generates_shifted_points
294 /* If false, the behaviour corresponds to the old ewald32_sigma_long_points_and_shift,
295 * so the function assumes that the generated points correspond to the unshifted reciprocal Bravais lattice,
296 * and adds beta to the generated points before calculations.
297 * If true, it assumes that they are already shifted.
299 const cart3_t beta,
300 const cart3_t particle_shift
303 const bool k_is_real = (cimag(k) == 0);
304 assert((latdim & LAT_XYONLY) && (latdim & SPACE3D));
305 assert((latdim & LAT1D) || (latdim & LAT2D));
306 const qpms_y_t nelem_sc = c->nelem_sc;
307 assert(nelem_sc > 0);
308 const qpms_l_t lMax = c->lMax;
310 // Manual init of the ewald summation targets
311 complex double *target_c = calloc(nelem_sc, sizeof(complex double));
312 memset(target, 0, nelem_sc * sizeof(complex double));
313 double *err_c = NULL;
314 if (err) {
315 err_c = calloc(nelem_sc, sizeof(double));
316 memset(err, 0, nelem_sc * sizeof(double));
319 #ifdef EWALD_AUTO_CUTOFF
321 * Experimental: stop the evaluation if the relative contribution of the "last layer"
322 * is below DBL_EPSILON to speed up the calculation.
323 * This obviously can currently work only for "suitable PGen"s that generate points in
324 * layers with increasing distance from the origin.
325 * Currently, the "layers" are chunks of 12 * lw + 1 points, where w is an
326 * increasing integer index (starting from 1).
327 * TODO: define the layers (optionally) in the PGen metadata and switch this feature on
328 * during run time instead of using this EWALD_AUTO_CUTOFF macro.
330 size_t lw = 1; // "Layer" index.
331 size_t li = 0; // Counter of points inside the current "layer".
332 double lsum, lsum_c; // Layer contribution magnitude sum + kahan compensation
333 kahaninit(&lsum, &lsum_c);
334 #endif
336 const complex double commonfac = 1/(k*k*unitcell_volume); // used in the very end (CFC)
337 if (k_is_real)
338 assert(creal(commonfac) > 0);
340 PGenSphReturnData pgen_retdata;
341 #ifndef NDEBUG
342 double rbeta_pq_prev;
343 #endif
344 // recycleable values if rbeta_pq stays the same:
345 complex double gamma_pq;
346 complex double z; // I?*κ*γ*particle_shift.z
347 complex double x; // κ*γ/(2*η)
348 complex double factor1d = 1; // the "additional" factor for the 1D case (then it is not 1)
349 // space for Gamma_pq[j]'s
350 complex double Gamma_pq[lMax/2+1];
351 double Gamma_pq_err[lMax/2+1];
352 // cpow() is expensive, so we want to save and reuse these too:
353 complex double minus_k_shiftz_pow[2*lMax + 1]; // __[i] = cpow(-k * particle_shift.z, i)
355 long complex double x = 1;
356 for(qpms_l_t i = 0; i <= 2*lMax; ++i) {
357 minus_k_shiftz_pow[i] = x;
358 x *= -k * particle_shift.z;
361 complex double rbeta_pq_div_k_pow[lMax + 1]; // __[i] = cpow_0lim_zi(rbeta_pq/k, i)
362 complex double gamma_pq_powm1[2*lMax + 1]; // __[i] = cpow(gamma_pq, i-1)
364 // CHOOSE POINT BEGIN
365 // TODO maybe PGen_next_sph is not the best coordinate system choice here
366 while ((pgen_retdata = PGen_next_sph(pgen_K)).flags & PGEN_NOTDONE) { // BEGIN POINT LOOP
367 cart3_t K_pq_cart;
368 sph_t beta_pq_sph;
369 if (pgen_generates_shifted_points) {
370 beta_pq_sph = pgen_retdata.point_sph;
371 const cart3_t beta_pq_cart = sph2cart(beta_pq_sph);
372 K_pq_cart = cart3_add(cart3_scale(-1, beta), beta_pq_cart);
373 } else { // as in the old _points_and_shift functions
374 const sph_t K_pq_sph = pgen_retdata.point_sph;
375 K_pq_cart = sph2cart(K_pq_sph);
376 const cart3_t beta_pq_cart = cart3_add(K_pq_cart, beta);
377 beta_pq_sph = cart2sph(beta_pq_cart);
380 const double rbeta_pq = beta_pq_sph.r;
381 const double arg_pq = beta_pq_sph.phi;
382 //const double beta_pq_theta = beta_pq_sph.theta; //unused
384 // CHOOSE POINT END
386 const complex double phasefac = cexp(I*cart3_dot(K_pq_cart,particle_shift)); // POINT-DEPENDENT (PFC) // !!!CHECKSIGN!!!
388 const bool new_rbeta_pq = (!pgen_generates_shifted_points) || (pgen_retdata.flags & !PGEN_OLD_R);
389 if (!new_rbeta_pq) assert(rbeta_pq == rbeta_pq_prev);
392 // R-DEPENDENT BEGIN
393 //void ewald3_2_sigma_long_Delta(complex double *target, int maxn, complex double x, complex double z) {
394 if (new_rbeta_pq) {
395 gamma_pq = clilgamma(rbeta_pq/k);
396 { // fill gamma_pq_powm1[] and rbeta_pq_div_k_pow[]
397 long complex double x = 1./gamma_pq;
398 for(qpms_l_t i = 0; i <= 2*lMax; ++i) {
399 gamma_pq_powm1[i] = x;
400 x *= gamma_pq;
402 for(qpms_l_t i = 0; i <= lMax; ++i) // not fastest, but foolproof
403 rbeta_pq_div_k_pow[i] = cpow_0lim_zi(rbeta_pq / k, i);
406 complex double x = gamma_pq*k/(2*eta);
407 complex double x2 = x*x;
409 if(particle_shift.z == 0) {
410 for(qpms_l_t j = 0; j <= lMax/2; ++j) {
411 qpms_csf_result Gam;
412 int retval = complex_gamma_inc_e(0.5-j, x2,
413 // we take the branch which is principal for the Re x < 0, Im x < 0 quadrant, cf. [Linton, p. 642 in the middle]
414 QPMS_LIKELY(creal(x2) < 0) && !signbit(cimag(x2)) ? -1 : 0, &Gam);
415 QPMS_ENSURE_SUCCESS_OR(retval, GSL_EUNDRFLW);
416 Gamma_pq[j] = Gam.val;
417 if(err) Gamma_pq_err[j] = Gam.err;
419 if (latdim & LAT1D)
420 factor1d = M_SQRT1_2 * .5 * k * gamma_pq;
421 } else if (latdim & LAT2D) {
422 QPMS_UNTESTED;
423 // TODO check the branches/phases!
424 complex double z = I * k * gamma_pq * particle_shift.z;
425 ewald3_2_sigma_long_Delta(Gamma_pq, err ? Gamma_pq_err : NULL, lMax/2, x, 0 /* FIXME */, z);
426 } else {
427 QPMS_NOT_IMPLEMENTED("1D lattices in 3D space outside of the line not implemented");
430 // R-DEPENDENT END
432 // TODO optimisations: all the j-dependent powers can be done for each j only once, stored in array
433 // and just fetched for each n, m pair
434 for(qpms_l_t n = 0; n <= lMax; ++n)
435 for(qpms_m_t m = -n; m <= n; ++m) {
436 if((particle_shift.z == 0) && ((m+n) % 2 != 0)) // odd coefficients are zero.
437 continue;
438 const qpms_y_t y = qpms_mn2y_sc(m, n);
439 size_t constidx = 0; // constants offset
440 const complex double e_imalpha_pq = cexp(I*m*arg_pq);
441 complex double jsum, jsum_c; ckahaninit(&jsum, &jsum_c);
442 double jsum_err, jsum_err_c; kahaninit(&jsum_err, &jsum_err_c); // TODO do I really need to kahan sum errors?
443 if (particle_shift.z == 0) { // TODO remove when the general case is stable and tested
444 assert((n-abs(m))/2 == c->s1_jMaxes[y]);
445 for(qpms_l_t j = 0; j <= c->s1_jMaxes[y]/*(n-abs(m))/2*/; ++j) { // FIXME </<= ?
446 complex double summand = rbeta_pq_div_k_pow[n-2*j]
447 * e_imalpha_pq * c->legendre0[gsl_sf_legendre_array_index(n,abs(m))] * min1pow_m_neg(m) // This line can actually go outside j-loop
448 * gamma_pq_powm1[2*j]// * Gamma_pq[j] bellow (GGG) after error computation
449 * c->s1_constfacs[y][j];
450 if(err) {
451 // FIXME include also other errors than Gamma_pq's relative error
452 kahanadd(&jsum_err, &jsum_err_c, Gamma_pq_err[j] * cabs(summand));
454 summand *= Gamma_pq[j]; // GGG
455 ckahanadd(&jsum, &jsum_c, summand);
457 jsum *= phasefac * factor1d; // PFC
458 ckahanadd(target + y, target_c + y, jsum);
459 #ifdef EWALD_AUTO_CUTOFF
460 kahanadd(&lsum, &lsum_c, cabs(jsum));
461 #endif
462 if(err) kahanadd(err + y, err_c + y, jsum_err);
463 } else { // particle_shift.z != 0
464 const qpms_l_t L_M = n - abs(m);
465 for(qpms_l_t j = 0; j <= L_M; ++j) { // outer sum
466 complex double ssum, ssum_c; ckahaninit(&ssum, &ssum_c);
467 // TODO errors of ssum
468 // inner sum: j <= s <= min(2*j, n - |m|), s has the same parity as n - |m|
469 for(qpms_l_t s = j + (L_M - j) % 2;
470 (s <= 2 * j) && (s <= L_M);
471 s += 2) {
472 complex double ssummand = c->S1_constfacs[y][constidx]
473 * minus_k_shiftz_pow[2*j - s] * rbeta_pq_div_k_pow[n - s];
474 ckahanadd(&ssum, &ssum_c, ssummand);
475 ++constidx;
477 const complex double jfactor = e_imalpha_pq * Gamma_pq[j] * gamma_pq_powm1[2*j];
478 if (err) { // FIXME include also other sources of error than Gamma_pq's relative error
479 double jfactor_err = Gamma_pq_err[j] * pow(cabs(gamma_pq), 2*j - 1);
480 kahanadd(&jsum_err, &jsum_err_c, jfactor_err * ssum);
482 complex double jsummand = jfactor * ssum;
483 ckahanadd(&jsum, &jsum_c, jsummand);
485 jsum *= phasefac; // factor1d not here, off-axis sums not implemented/allowed.
486 ckahanadd(target + y, target_c + y, jsum);
487 #ifdef EWALD_AUTO_CUTOFF
488 kahanadd(&lsum, &lsum_c, cabs(jsum));
489 #endif
490 if(err) kahanadd(err + y, err_c + y, jsum_err);
493 #ifndef NDEBUG
494 rbeta_pq_prev = rbeta_pq;
495 #endif
496 #ifdef EWALD_AUTO_CUTOFF
497 ++li;
498 double cursum_min = INFINITY;
499 for (qpms_y_t y = 0; y < nelem_sc; ++y) {
500 const double a = cabs(target[y]);
501 if (a) // Skip possible symmetry-induced zeros; TODO this might need to be done in completely different way, perhaps on per-y basis
502 cursum_min = MIN(cursum_min, a);
504 if (li >= 12 * lw + 1) {
505 if(lsum < DBL_EPSILON * cursum_min)
506 goto ewald3_21_xy_sigma_long_end_point_loop;
507 kahaninit(&lsum, &lsum_c);
508 li = 0;
509 ++lw;
511 #endif
512 } // END POINT LOOP
513 #ifdef EWALD_AUTO_CUTOFF
514 ewald3_21_xy_sigma_long_end_point_loop:
515 #endif
517 free(err_c);
518 free(target_c);
519 for(qpms_y_t y = 0; y < nelem_sc; ++y) // CFC common factor from above
520 target[y] *= commonfac;
521 if(err)
522 for(qpms_y_t y = 0; y < nelem_sc; ++y)
523 err[y] *= commonfac;
524 return 0;
528 // 1D chain along the z-axis; not many optimisations here as the same
529 // shifted beta radius could be recycled only once anyways
530 int ewald3_1_z_sigma_long (
531 complex double *target, // must be c->nelem_sc long
532 double *err,
533 const qpms_ewald3_constants_t *c,
534 const double eta, const complex double k,
535 const double unitcell_volume /* length (periodicity) in this case */,
536 const LatticeDimensionality latdim,
537 PGen *pgen_K, const bool pgen_generates_shifted_points
538 /* If false, the behaviour corresponds to the old ewald32_sigma_long_points_and_shift,
539 * so the function assumes that the generated points correspond to the unshifted reciprocal Bravais lattice,
540 * and adds beta to the generated points before calculations.
541 * If true, it assumes that they are already shifted.
543 const cart3_t beta,
544 const cart3_t particle_shift
547 assert(LatticeDimensionality_checkflags(latdim, LAT_1D_IN_3D_ZONLY));
548 assert(beta.x == 0 && beta.y == 0);
549 assert(particle_shift.x == 0 && particle_shift.y == 0);
550 const double beta_z = beta.z;
551 const double particle_shift_z = particle_shift_z;
552 const qpms_y_t nelem_sc = c->nelem_sc;
553 const qpms_l_t lMax = c->lMax;
555 // Manual init of the ewald summation targets
556 complex double *target_c = calloc(nelem_sc, sizeof(complex double));
557 memset(target, 0, nelem_sc * sizeof(complex double));
558 double *err_c = NULL;
559 if (err) {
560 err_c = calloc(nelem_sc, sizeof(double));
561 memset(err, 0, nelem_sc * sizeof(double));
564 const double commonfac = 1/(k*unitcell_volume); // multiplied in the very end (CFC)
565 assert(commonfac > 0);
567 // space for Gamma_pq[j]'s (I rewrite the exp. ints. E_n in terms of Gamma fns., cf. my ewald.lyx notes, (eq:1D_z_LRsum).
568 qpms_csf_result Gamma_pq[lMax/2+1];
570 PGenSphReturnData pgen_retdata;
571 // CHOOSE POINT BEGIN
572 // TODO FIXME USE PGen_next_z
573 while ((pgen_retdata = PGen_next_sph(pgen_K)).flags & PGEN_NOTDONE) { // BEGIN POINT LOOP
574 assert(pgen_retdata.flags & PGEN_AT_Z);
575 double K_z, beta_mu_z;
576 if (pgen_generates_shifted_points) {
577 beta_mu_z = ((pgen_retdata.point_sph.theta == 0) ?
578 pgen_retdata.point_sph.r : -pgen_retdata.point_sph.r); //!!!CHECKSIGN!!!
579 K_z = beta_mu_z - beta_z;
580 } else { // as in the old _points_and_shift functions
581 K_z = ((pgen_retdata.point_sph.theta == 0) ?
582 pgen_retdata.point_sph.r : -pgen_retdata.point_sph.r); // !!!CHECKSIGN!!!
583 beta_mu_z = K_z + beta_z;
585 double rbeta_mu = fabs(beta_mu_z);
586 // CHOOSE POINT END
588 const complex double phasefac = cexp(I * K_z * particle_shift_z); // POINT-DEPENDENT (PFC) // !!!CHECKSIGN!!!
590 // R-DEPENDENT BEGIN
591 complex double gamma_pq = clilgamma(rbeta_mu/k); // For real beta and k this is real or pure imaginary ...
592 const complex double z = csq(gamma_pq*k/(2*eta));// ... so the square (this) is in fact real.
593 for(qpms_l_t j = 0; j <= lMax/2; ++j) {
594 int retval = complex_gamma_inc_e(0.5-j, z,
595 // we take the branch which is principal for the Re z < 0, Im z < 0 quadrant, cf. [Linton, p. 642 in the middle]
596 QPMS_LIKELY(creal(z) < 0) && !signbit(cimag(z)) ? -1 : 0, Gamma_pq+j);
597 QPMS_ENSURE_SUCCESS_OR(retval, GSL_EUNDRFLW);
599 // R-DEPENDENT END
600 // TODO optimisations: all the j-dependent powers can be done for each j only once, stored in array
601 // and just fetched for each n
602 for(qpms_l_t n = 0; n <= lMax; ++n) {
603 const qpms_y_t y = qpms_mn2y_sc(0, n);
604 complex double jsum, jsum_c; ckahaninit(&jsum, &jsum_c);
605 double jsum_err, jsum_err_c; kahaninit(&jsum_err, &jsum_err_c); // TODO do I really need to kahan sum errors?
606 for(qpms_l_t j = 0; j <= n/2; ++j) {
607 complex double summand = pow(rbeta_mu/k, n-2*j)
608 * ((beta_mu_z > 0) ? // TODO this can go outsize the j-loop
609 c->legendre_plus1[gsl_sf_legendre_array_index(n,0)] :
610 (c->legendre_minus1[gsl_sf_legendre_array_index(n,0)] * min1pow(n))
612 // * min1pow_m_neg(m) // not needed as m == 0
613 * cpow(gamma_pq, 2*j) // * Gamma_pq[j] bellow (GGG) after error computation
614 * c->s1_constfacs_1Dz[n][j];
615 /* s1_consstfacs_1Dz[n][j] =
617 * -I**(n+1) (-1)**j * n!
618 * --------------------------
619 * j! * 2**(2*j) * (n - 2*j)!
622 if(err) {
623 // FIXME include also other errors than Gamma_pq's relative error
624 kahanadd(&jsum_err, &jsum_err_c, Gamma_pq[j].err * cabs(summand));
626 summand *= Gamma_pq[j].val; // GGG
627 ckahanadd(&jsum, &jsum_c, summand);
629 jsum *= phasefac; // PFC
630 ckahanadd(target + y, target_c + y, jsum);
631 if(err) kahanadd(err + y, err_c + y, jsum_err);
633 } // END POINT LOOP
635 free(err_c);
636 free(target_c);
637 for(qpms_y_t y = 0; y < nelem_sc; ++y) // CFC common factor from above
638 target[y] *= commonfac;
639 if(err)
640 for(qpms_y_t y = 0; y < nelem_sc; ++y)
641 err[y] *= commonfac;
642 return 0;
645 int ewald3_sigma_long (
646 complex double *target, // must be c->nelem_sc long
647 double *err,
648 const qpms_ewald3_constants_t *c,
649 const double eta, const complex double k,
650 const double unitcell_volume /* with the corresponding lattice dimensionality */,
651 const LatticeDimensionality latdim,
652 PGen *pgen_K, const bool pgen_generates_shifted_points
653 /* If false, the behaviour corresponds to the old ewald32_sigma_long_points_and_shift,
654 * so the function assumes that the generated points correspond to the unshifted reciprocal Bravais lattice,
655 * and adds beta to the generated points before calculations.
656 * If true, it assumes that they are already shifted.
658 const cart3_t beta,
659 const cart3_t particle_shift
662 assert(latdim & SPACE3D);
663 if (latdim & LAT_XYONLY)
664 return ewald3_21_xy_sigma_long(target, err, c, eta, k, unitcell_volume,
665 latdim, pgen_K, pgen_generates_shifted_points, beta, particle_shift);
666 else if (latdim & LAT_ZONLY)
667 return ewald3_1_z_sigma_long(target, err, c, eta, k, unitcell_volume,
668 latdim, pgen_K, pgen_generates_shifted_points, beta, particle_shift);
669 // TODO 3D case and general 2D case
670 else QPMS_NOT_IMPLEMENTED("3D or general 2D (outside XY plane) Ewald sum.");
673 struct sigma2_integrand_params {
674 int n;
675 double k, R;
678 static double sigma2_integrand(double ksi, void *params) {
679 struct sigma2_integrand_params *p = (struct sigma2_integrand_params *) params;
680 return exp(-sq(p->R * ksi) + sq(p->k / ksi / 2)) * pow(ksi, 2*p->n);
683 static int ewald32_sr_integral(double r, double k, int n, double eta,
684 double *result, double *err, gsl_integration_workspace *workspace)
686 struct sigma2_integrand_params p;
689 const double R0 = r; // Maybe could be chosen otherwise, but fuck it for now.
690 p.n = n;
691 eta *= R0;
692 p.k = k * R0;
693 p.R = r / R0; // i.e. p.R = 1
695 gsl_function F;
696 F.function = sigma2_integrand;
697 F.params = &p;
699 int retval = gsl_integration_qagiu(&F, eta, INTEGRATION_EPSABS,
700 INTEGRATION_EPSREL, INTEGRATION_WORKSPACE_LIMIT,
701 workspace, result, err);
702 double normfac = pow(R0, -2*p.n - 1);
703 *result *= normfac;
704 *err *= normfac;
705 return retval;
708 // a version allowing complex k
710 struct sigma2_integrand_params_ck {
711 int n;
712 complex double k;
713 double R;
716 // TODO ther might be some space for optimisation if needed, as now we calculate everything twice
717 // including the whole complex exponential (throwing the imaginary/real part away)
718 static double sigma2_integrand_ck_real(double ksi, void *params) {
719 struct sigma2_integrand_params_ck *p = (struct sigma2_integrand_params_ck *) params;
720 return creal(cexp(-csq(p->R * ksi) + csq(p->k / ksi / 2))) * pow(ksi, 2*p->n);
722 static double sigma2_integrand_ck_imag(double ksi, void *params) {
723 struct sigma2_integrand_params_ck *p = (struct sigma2_integrand_params_ck *) params;
724 return cimag(cexp(-csq(p->R * ksi) + csq(p->k / ksi / 2))) * pow(ksi, 2*p->n);
727 static int ewald32_sr_integral_ck(double r, complex double k, int n, double eta,
728 complex double *result, double *err, gsl_integration_workspace *workspace)
730 struct sigma2_integrand_params_ck p;
733 const double R0 = r; // Maybe could be chosen otherwise, but fuck it for now.
734 p.n = n;
735 eta *= R0;
736 p.k = k * R0;
737 p.R = r / R0; // i.e. p.R = 1
739 gsl_function F;
740 F.params = &p;
741 double result_real, result_imag, err_real, err_imag;
743 F.function = sigma2_integrand_ck_real;
744 // TODO check return values
745 int retval = gsl_integration_qagiu(&F, eta, INTEGRATION_EPSABS,
746 INTEGRATION_EPSREL, INTEGRATION_WORKSPACE_LIMIT,
747 workspace, &result_real, &err_real);
749 F.function = sigma2_integrand_ck_imag;
750 // TODO check return values
751 retval = gsl_integration_qagiu(&F, eta, INTEGRATION_EPSABS,
752 INTEGRATION_EPSREL, INTEGRATION_WORKSPACE_LIMIT,
753 workspace, &result_imag, &err_imag);
755 *result = result_real + I*result_imag;
756 *err = sqrt(sq(err_real) + sq(err_imag));
758 double normfac = pow(R0, -2*p.n - 1);
759 *result *= normfac;
760 *err *= normfac;
761 return retval;
764 int ewald3_sigma_short(
765 complex double *target, // must be c->nelem_sc long
766 double *err, // must be c->nelem_sc long or NULL
767 const qpms_ewald3_constants_t *c,
768 const double eta, const complex double k /* TODO COMPLEX */,
769 const LatticeDimensionality latdim, // apart from asserts and possible optimisations ignored, as the SR formula stays the same
770 PGen *pgen_R, const bool pgen_generates_shifted_points
771 /* If false, the behaviour corresponds to the old ewald32_sigma_short_points_and_shift,
772 * so the function assumes that the generated points correspond to the unshifted Bravais lattice,
773 * and adds particle_shift to the generated points before calculations.
774 * If true, it assumes that they are already shifted (if calculating interaction between
775 * different particles in the unit cell).
777 const cart3_t beta,
778 const cart3_t particle_shift
781 const bool k_is_real = (cimag(k) == 0); // TODO check how the compiler optimises the loops
782 const double kreal = creal(k);
783 const qpms_y_t nelem_sc = c->nelem_sc;
784 const qpms_l_t lMax = c->lMax;
785 gsl_integration_workspace *workspace =
786 gsl_integration_workspace_alloc(INTEGRATION_WORKSPACE_LIMIT);
788 double legendre_buf[gsl_sf_legendre_array_n(c->lMax)]; // work space for the legendre polynomials (used only in the general case)
790 // Manual init of the ewald summation targets
791 complex double * const target_c = calloc(nelem_sc, sizeof(complex double));
792 memset(target, 0, nelem_sc * sizeof(complex double));
793 double *err_c = NULL;
794 if (err) {
795 err_c = calloc(nelem_sc, sizeof(double));
796 memset(err, 0, nelem_sc * sizeof(double));
799 #ifdef EWALD_AUTO_CUTOFF
801 * Experimental; see the notes at the first #ifdef EWALD_AUTO_CUTOFF in this file.
803 size_t lw = 1; // "Layer" index.
804 size_t li = 0; // Counter of points inside the current "layer".
805 double lsum, lsum_c; // Layer contribution magnitude sum + kahan compensation
806 kahaninit(&lsum, &lsum_c);
807 #endif
809 PGenSphReturnData pgen_retdata;
810 #ifndef NDEBUG
811 double r_pq_shifted_prev;
812 #endif
813 // recyclable variables if r_pq_shifted stays the same:
814 double intres[lMax+1], interr[lMax+1];
815 complex double cintres[lMax+1];
817 // CHOOSE POINT BEGIN
818 // TODO check whether _next_sph is the optimal coordinate system choice here
819 while ((pgen_retdata = PGen_next_sph(pgen_R)).flags & PGEN_NOTDONE) { // BEGIN POINT LOOP
820 // CHOOSE POINT END
821 cart3_t Rpq_shifted_cart; // I will need both sph and cart representations anyway...
822 sph_t Rpq_shifted_sph;
823 if (pgen_generates_shifted_points) {
824 Rpq_shifted_sph = pgen_retdata.point_sph;
825 Rpq_shifted_cart = sph2cart(Rpq_shifted_sph);
826 } else { // as in the old _points_and_shift functions
827 //const point2d Rpq_shifted = Rpoints_plus_particle_shift[i];
828 const sph_t bravais_point_sph = pgen_retdata.point_sph;
829 const cart3_t bravais_point_cart = sph2cart(bravais_point_sph);
830 Rpq_shifted_cart = cart3_add(bravais_point_cart, cart3_scale(-1, particle_shift)); // CHECKSIGN!!!
831 Rpq_shifted_sph = cart2sph(Rpq_shifted_cart);
834 // TODO eliminate and use the Rpq_shifted_sph members directly (but in compiler optimizations we trust)
835 const double Rpq_shifted_arg = Rpq_shifted_sph.phi; //atan2(Rpq_shifted.y, Rpq_shifted.x); // POINT-DEPENDENT
836 const double Rpq_shifted_theta = Rpq_shifted_sph.theta; // POINT-DEPENDENT
837 const double r_pq_shifted = Rpq_shifted_sph.r;
839 // if the radius is the same as in previous cycle, most of the calculations can be recycled
840 const bool new_r_pq_shifted = (!pgen_generates_shifted_points) || (pgen_retdata.flags & !PGEN_OLD_R);
841 if (!new_r_pq_shifted) assert(r_pq_shifted_prev == r_pq_shifted);
843 const complex double e_beta_Rpq = cexp(I*cart3_dot(beta, Rpq_shifted_cart)); // POINT-DEPENDENT
844 LatticeDimensionality speedup_regime = 0;
845 if ((latdim & LAT_2D_IN_3D_XYONLY) == LAT_2D_IN_3D_XYONLY) speedup_regime = LAT_2D_IN_3D_XYONLY;
846 if ((latdim & LAT_1D_IN_3D_ZONLY) == LAT_1D_IN_3D_ZONLY) speedup_regime = LAT_1D_IN_3D_ZONLY;
848 const double * legendre_array;
850 switch(speedup_regime) {
851 // speedup checks for special geometries and Legendre polynomials
852 case LAT_1D_IN_3D_ZONLY:
853 assert((pgen_retdata.flags & PGEN_AT_Z) == PGEN_AT_Z);
854 assert(Rpq_shifted_theta == M_PI || Rpq_shifted_theta == 0);
855 legendre_array = (Rpq_shifted_theta == 0) ? c->legendre_plus1 : c->legendre_minus1; // CHECKSIGN
856 break;
857 case LAT_2D_IN_3D_XYONLY:
858 assert((pgen_retdata.flags &PGEN_AT_XY) == PGEN_AT_XY);
859 assert(fabs(Rpq_shifted_theta - M_PI_2) < DBL_EPSILON * 1024);
860 // assert(Rpq_shifted_theta == M_PI_2); // FIXME this should work as well
861 legendre_array = c->legendre0;
862 break;
863 default:
864 QPMS_ENSURE_SUCCESS(gsl_sf_legendre_array_e(c->legendre_normconv, lMax, cos(Rpq_shifted_theta), c->legendre_csphase, legendre_buf));
865 legendre_array = legendre_buf;
866 break;
869 for(qpms_l_t n = 0; n <= lMax; ++n) {
870 const double complex prefacn = - I * (k_is_real ? pow(2./creal(k),n+1) : cpow(2./k, n+1)) * M_2_SQRTPI / 2; // profiling TODO put outside the R-loop and multiply in the end?
871 const double R_pq_pown = pow(r_pq_shifted, n); // profiling TODO: maybe put this into the new_r_pq_shifted condition as well?
872 if (new_r_pq_shifted) {
873 int retval;
874 if (k_is_real) {
875 double intres_real;
876 retval = ewald32_sr_integral(r_pq_shifted, kreal, n, eta,
877 &intres_real, interr + n, workspace);
878 cintres[n] = intres_real;
879 } else
880 retval = ewald32_sr_integral_ck(r_pq_shifted, k, n, eta,
881 cintres+n, interr + n, workspace);
882 QPMS_ENSURE_SUCCESS(retval);
883 } // otherwise recycle the integrals
884 for (qpms_m_t m = -n; m <= n; ++m){
885 complex double e_imf;
886 // SPEEDUPS for some special geometries
887 if(speedup_regime == LAT_2D_IN_3D_XYONLY) { //2D lattice inside the xy plane
888 if((m+n) % 2 != 0) // odd coefficients are zero.
889 continue; // nothing needed, already done by memset
890 e_imf = cexp(I*m*Rpq_shifted_arg); // profiling TODO: calculate outside the n-loop?
891 } else if (speedup_regime == LAT_1D_IN_3D_ZONLY) { // 1D lattice along the z axis
892 if (m != 0) // m-non-zero coefficients are zero
893 continue; // nothing needed, already done by memset
894 e_imf = 1;
895 } else { // general 1D/2D/3D lattice in 3D space
896 e_imf = cexp(I*m*Rpq_shifted_arg);
899 const double leg = legendre_array[gsl_sf_legendre_array_index(n, abs(m))];
901 const qpms_y_t y = qpms_mn2y_sc(m,n);
902 if(err)
903 kahanadd(err + y, err_c + y, cabs(leg * (prefacn / I) * R_pq_pown
904 * interr[n])); // TODO include also other errors
905 complex double thesummand = prefacn * R_pq_pown * leg * cintres[n] * e_beta_Rpq * e_imf * min1pow_m_neg(m);
906 ckahanadd(target + y, target_c + y, thesummand);
907 #ifdef EWALD_AUTO_CUTOFF
908 kahanadd(&lsum, &lsum_c, cabs(thesummand));
909 #endif
913 #ifndef NDEBUG
914 r_pq_shifted_prev = r_pq_shifted;
915 #endif
916 #ifdef EWALD_AUTO_CUTOFF
917 ++li;
918 double cursum_min = INFINITY;
919 for (qpms_y_t y = 0; y < nelem_sc; ++y) {
920 const double a = cabs(target[y]);
921 if (a) // Skip possible symmetry-induced zeros; TODO this might need to be done in completely different way, perhaps on per-y basis
922 cursum_min = MIN(cursum_min, a);
924 if (li >= 12 * lw + 1) {
925 if(lsum < DBL_EPSILON * cursum_min)
926 goto ewald3_sigma_short_end_point_loop;
927 kahaninit(&lsum, &lsum_c);
928 li = 0;
929 ++lw;
931 #endif
933 //END POINT LOOP
934 #ifdef EWALD_AUTO_CUTOFF
935 ewald3_sigma_short_end_point_loop:
936 #endif
938 gsl_integration_workspace_free(workspace);
939 if(err) free(err_c);
940 free(target_c);
941 return 0;