descriptionSol Genomics Network
homepage URLhttp://solgenomics.net
repository URLhttps://github.com/solgenomics/sgn.git
ownerjonathan@leto.net
last changeWed, 20 Nov 2024 14:23:22 +0000 (20 09:23 -0500)
last refreshThu, 21 Nov 2024 08:36:54 +0000 (21 09:36 +0100)
content tags
add:
README.md

Breedbase / SGN

This repo contains code behind the Breedbase system (including Cassavabase, Musabase, Sweetpotatobase, Yambase) and the Sol Genomics Network website.

Docker images are available for the system at the Breedbase DockerHub page, so you shouldn't need to build the system yourself. Build scripts are available in the breedbase_dockerfile GitHub repo.

To run Breedbase, the easiest way is to git clone the repo https://github.com/solgenomics/breedbase_site/. Required prerequisites on the system are git, nginx, docker and docker compose. Follow the instructions on the breedbase_site wiki.

Contact SGN using the contact form on the page https://solgenomics.net/contact/form for more information.

Users should refer to the user's manual.

Developers should refer to the developer's guide.

:-)

shortlog
18 hours ago Lukas MuellerMerge pull request #5199 from solgenomics/topic/trackin... mastersgn-403.0
18 hours ago Lukas MuellerMerge pull request #5210 from solgenomics/fix_missing_a...
2 days ago ryan-prebleAdd eval to catch missing analysis_id error.
5 days ago titima15fixed dialog info and cleaned up
6 days ago Lukas MuellerMerge pull request #5185 from solgenomics/5022_show_sto...
6 days ago Lukas MuellerMerge pull request #5187 from solgenomics/topic/bulk_do...
6 days ago Lukas MuellerMerge pull request #5195 from solgenomics/topic/seedlot...
7 days ago titima15modified naming format
7 days ago titima15clean up and fixed usage info
8 days ago titima15fixed linting error
8 days ago titima15clean up
8 days ago titima15fixed linting errors
8 days ago titima15fixed linting errors
8 days ago Lukas MuellerMerge pull request #5177 from solgenomics/topic/solgs...
8 days ago Lukas MuellerMerge pull request #5197 from solgenomics/topic/brapi_o...
8 days ago titima15Merge branch 'master' into topic/tracking_transformation
...
tags
18 hours ago sgn-403.0 sgn-403.0
2 weeks ago sgn-402.0 sgn-402.0
3 weeks ago sgn-401.0 sgn-401.0
3 weeks ago sgn-400.0 sgn-400.0
6 weeks ago sgn-399.0 sgn-399.0
7 weeks ago sgn-398.0 sgn-398.0
2 months ago sgn-397.0 sgn-397.0
2 months ago sgn-396.0 sgn-396.0
3 months ago sgn-395.1 sgn-395.1
3 months ago sgn-395.0 sgn-395.0
3 months ago sgn-394.0 sgn-394.0
3 months ago status_20241001
4 months ago sgn-393.1 sgn-393.1
4 months ago sgn-393.0 sgn-393.0
4 months ago sgn-392.0 sgn-392.0
5 months ago sgn-391.0 sgn-391.0
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heads
10 hours ago topic/open_pollinated
18 hours ago master
18 hours ago topic/fix_test_fixture_cleanup
18 hours ago topic/add_ontology_table_conversion_script
29 hours ago fix-vcf-upload
35 hours ago topic/repetitive_measurements2
36 hours ago 5154_analyses_dataset_details
37 hours ago 5022_show_stored_analysis
42 hours ago topic/generic_single_trial_upload
2 days ago topic/another_load_people.pl_tweak
2 days ago topic/solgs/pca-fix-181124
2 days ago topic/solgs/store-pca-results
5 days ago topic/generic_trial_upload
7 days ago fix-list-validation
8 days ago topic/gbsappui
8 days ago 5198_locus_ids_to_names
...