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Merge pull request #4252 from solgenomics/topic/genotyping_project
2022-09-15
afpowell
Merge pull request #4193 from solgenomics/topic/metabolomics
.
.
.
commit
|
commitdiff
|
tree
2022-09-07
afpowell
swit
c
h requir
e
d vs optional for
m
e
tabolit
e
i
dentification
.
.
.
commit
|
commitdiff
|
tree
2022-05-02
afpowell
Merge
b
ranch '
m
ast
e
r' into topic/nirs_bra
p
i_se
t
up
commit
|
commitdiff
|
tree
2022-05-02
afpowell
return germplas
m
Name and ge
r
mplasmDbId with Ni
r
s
BrAPI
.
.
.
commit
|
commitdiff
|
tree
2022-02-28
afpowell
t
e
mporar
i
l
y
remove metab
.
and
t
ranscr
.
from controller
commit
|
commitdiff
|
tree
2022-02-14
afpowell
commen
t
me
t
ab
a
nd
transcr
i
ptomic f
o
r testi
n
g
commit
|
commitdiff
|
tree
2022-02-14
afp
o
well
comment out dumper lines
commit
|
commitdiff
|
tree
2021-11-18
afpowell
s
t
a
rt fixing
t
r
a
nscriptomics high-dim brapi
commit
|
commitdiff
|
tree
2021-11-04
afpowell
add ti
s
sue
t
ype to br
a
pi
nir
s
ma
t
rix
row response
commit
|
commitdiff
|
tree
2021-10-28
afpowell
Trial-spe
c
ific
search for nirs brapi
commit
|
commitdiff
|
tree
2021-09-16
afpowell
h
igh d
i
mensional
upda
t
e
commit
|
commitdiff
|
tree
2021-08-13
afpowell
updat
e
d high-dimen
s
iona
l
nirs brapi
o
bservatio
n
UnitDbId
.
.
.
commit
|
commitdiff
|
tree
2021-07-19
afpowell
re
w
or
k
ing BrAPI hidim se
t
u
p
commit
|
commitdiff
|
tree
2021-06-11
afpowell
se
t
u
p
b
r
a
pi
nirs det
a
il call and
t
ranscript
o
mic/metabolomic
.
.
.
commit
|
commitdiff
|
tree
2021-06-07
afpowe
l
l
a
d
d pixel per cm conv
e
rsion
commit
|
commitdiff
|
tree
2021-06-07
afp
o
well
nirs bra
p
i set u
p
for single prot
o
col,
s
ingle access
i
on
commit
|
commitdiff
|
tree
2021-06-03
afpowell
Merge branch
'
master' into topic/nirs_brapi_setup
commit
|
commitdiff
|
tree
2021-06-03
afpowell
initial s
e
t up
f
or brapi
n
irs ca
l
l
commit
|
commitdiff
|
tree
2021-05-14
afpowell
upda
t
e
breedi
n
g
m
ethods call to
use fem
a
le parent
v
alues
commit
|
commitdiff
|
tree
2021-05-07
afpowell
remove h
a
rdcoded vari
t
ome, re
m
o
ve comment lines
commit
|
commitdiff
|
tree
2021-05-07
a
f
p
o
we
l
l
redirect project pages
i
n controller static
commit
|
commitdiff
|
tree
2021-05-06
afpow
e
ll
Merge bra
n
ch 'master'
i
nto topic
/
brapi_
g
ermp
l
asm_breedi
n
g
m
ethods
commit
|
commitdiff
|
tree
2021-05-06
afpowell
resolve conflicts in brapi ge
r
mplasm tests
commit
|
commitdiff
|
tree
2021-05-06
afpowell
use o
b
jec
t
_id f
o
r getting cross type (b
r
e
e
ding meth
o
d
.
.
.
commit
|
commitdiff
|
tree
2021-05-03
afpowe
l
l
add
a
tte
m
pt
for
stock re
l
a
tionship retrieval of cross
.
.
.
commit
|
commitdiff
|
tree
2021-04-23
afpowell
adjust Brapi
test for correct b
r
eedingMethodDbID
commit
|
commitdiff
|
tree
2021-04-23
afpowell
r
etu
r
n
un
k
nown for
u
nd
e
fined breed
i
n
g
methods
commit
|
commitdiff
|
tree
2021-04-16
afpow
e
ll
n
e
w dise
a
se image
commit
|
commitdiff
|
tree
2021-04-15
afpowell
add image file
f
or
s
g
n
project
commit
|
commitdiff
|
tree
2021-04-14
afpo
w
el
l
add
breeding methods re
t
rieval t
o
brapi
g
e
rmpl
a
sm simp
l
e
.
.
.
commit
|
commitdiff
|
tree
2021-04-12
afp
o
well
re
t
rieve breeding
m
ethod in B
r
A
PI ge
r
m
plasm search
commit
|
commitdiff
|
tree
2021-03-26
afpowell
add new
t
omato i
m
m
un
i
t
y page to controller
commit
|
commitdiff
|
tree
2021-03-19
afpo
w
e
ll
fix quotes for phenotype file in
g
w
as tool
commit
|
commitdiff
|
tree
2021-03-17
afp
o
well
fix
t
y
p
o in breedingmethods test
commit
|
commitdiff
|
tree
2021-03-17
afpowell
set up t
e
st for breedingmethods
brapi ca
l
l
commit
|
commitdiff
|
tree
2021-03-12
afp
o
well
finish s
e
t
ting up breedingmethods brapi call
commit
|
commitdiff
|
tree
2021-03-10
afpow
e
l
l
in
i
tial set up
of
b
r
e
edingmethods brap
i
call
commit
|
commitdiff
|
tree
2021-02-01
afpow
e
ll
rem
o
ve
prompt from Fi
e
ld
Book
t
rait d
i
alog
s
elect box
commit
|
commitdiff
|
tree
2021-02-01
afpowe
l
l
en
a
ble multi-select for Field book trait
f
il
e
creat
i
o
n
commit
|
commitdiff
|
tree
2020-12-28
afpowell
remove commented test line
commit
|
commitdiff
|
tree
2020-12-18
afpowell
M
erge b
r
anch
'
master'
i
nto
t
o
pic/a
d
d_accessions_
t
o_trial_det
a
il
commit
|
commitdiff
|
tree
2020-12-14
afpowell
Merge branch 'm
a
ster' into topic/add_acc
e
ssi
o
ns_to_trial_detail
commit
|
commitdiff
|
tree
2020-12-14
a
f
powell
fix documentation and delet
e
co
m
me
n
ted lines
commit
|
commitdiff
|
tree
2020-12-14
afpowell
a
dd accession count
t
o
t
r
i
al pag
e
commit
|
commitdiff
|
tree
2020-11-23
afpowell
Merge pull
r
eques
t
#3189
from sol
g
e
n
omi
c
s/to
p
ic/add_v
i
deo_tu
.
.
.
commit
|
commitdiff
|
tree
2020-11-09
af
p
owell
Me
r
ge pu
l
l req
u
es
t
#3138
from solgenomics/topic/
f
ix_mixe
d
_mo
.
.
.
commit
|
commitdiff
|
tree
2020-11-09
afpowell
M
er
g
e pull request #313
5
from solgenomics/topic/fix
_
sequence
.
.
.
commit
|
commitdiff
|
tree
2020-11-02
afpowell
s
i
z
e adju
s
t
m
ents of scre
e
n captures in wizard docs
commit
|
commitdiff
|
tree
2020-10-30
afpowell
add
missin
g
md extensi
o
n to link
commit
|
commitdiff
|
tree
2020-10-30
afpowell
more
updates
t
o wizard search docs
commit
|
commitdiff
|
tree
2020-10-29
afpowell
up
d
ate wizard search/se
l
ec
t
ion docs
commit
|
commitdiff
|
tree
2020-08-13
afpowell
test use of red
u
ced model
commit
|
commitdiff
|
tree
2020-08-07
afpow
e
ll
retain transp
o
s
i
tion of matrix for imputation
commit
|
commitdiff
|
tree
2020-08-07
af
p
o
wel
l
test commenting
of
u
nec
e
ssary l
i
nes
commit
|
commitdiff
|
tree
2020-07-24
afpo
w
ell
updated file
p
a
t
hs for pca in
g
w
a
s
commit
|
commitdiff
|
tree
2020-07-20
afpo
w
ell
remov
e
dataset
i
d alert
commit
|
commitdiff
|
tree
2020-07-17
afp
o
we
l
l
f
i
x dataset
select
o
r for
g
w
a
s
commit
|
commitdiff
|
tree
2020-05-21
afpowell
f
i
x j
s
variable name
t
hat
w
as sending togg
l
e swit
c
h
.
.
.
commit
|
commitdiff
|
tree
2020-05-15
afpowell
Change
s
pacing
commit
|
commitdiff
|
tree
2020-05-15
afpowell
Add in
f
ormat
i
on to
clar
i
fy phe
n
otype upload
commit
|
commitdiff
|
tree
2020-05-11
afpowell
Merge branch 'master' i
n
to topic/f
i
x_fi
e
ld_b
o
ok_
t
rait_file_c
.
.
.
commit
|
commitdiff
|
tree
2020-05-11
afpowell
clean up
c
ommented lines an
d
al
e
rts in
j
a
vasc
r
ipt
commit
|
commitdiff
|
tree
2020-05-11
afpow
e
ll
fix tra
i
t file by i
n
dividual s
e
lection
commit
|
commitdiff
|
tree
2020-05-07
afpowe
l
l
Merge pull req
u
e
st #2925
from s
o
l
g
e
nom
i
cs/
t
o
pi
c
/fixing_tempf
.
.
.
commit
|
commitdiff
|
tree
2020-05-01
a
f
p
owel
l
Mer
g
e pul
l
r
equest
#29
1
3 from solgenom
i
c
s
/
t
o
pic/
a
dd_cache_ro
.
.
.
commit
|
commitdiff
|
tree
2020-05-01
afpow
e
ll
fix issue w
h
ere number of selected tra
i
ts
a
lw
a
y
s showed
.
.
.
commit
|
commitdiff
|
tree
2020-04-20
a
f
powell
a
djust the dataset file test to not be pa
s
sed the catalyst
.
.
.
commit
|
commitdiff
|
tree
2020-04-17
afpowell
change gwas and data
s
et to not
pas
s
c
a
talyst conte
x
t
commit
|
commitdiff
|
tree
2020-03-30
afpowell
M
e
r
g
e branch 'master' in
t
o
topic/datas
e
t_fil
e
_and_gwas_with_
.
.
.
commit
|
commitdiff
|
tree
2020-03-25
afpowell
fix
R scr
i
pt to wor
k
with ge
r
mp
l
asmNam
e
in
s
tead of
.
.
.
commit
|
commitdiff
|
tree
2020-03-25
afpo
w
ell
send gen
o
t
y
pe data d
i
re
c
tly
t
o
clus
t
er without subsettin
g
commit
|
commitdiff
|
tree
2020-03-16
a
fpowe
l
l
Merge
branch 'topi
c
/
additional
_
li
n
ks_f
o
r_sequenced_accession
.
.
.
commit
|
commitdiff
|
tree
2020-03-16
afpowell
merg
e
master to resolve conflicts
commit
|
commitdiff
|
tree
2020-03-16
a
fpowell
fix conflicts to mak
e
pull request
commit
|
commitdiff
|
tree
2020-03-14
afpowell
ad
d
addi
t
ional li
n
ks to t
h
e test
commit
|
commitdiff
|
tree
2020-03-14
afpowel
l
change o
r
d
er for consistency
,
fix t
y
pos fo
r
ftp and
.
.
.
commit
|
commitdiff
|
tree
2020-03-14
a
f
powel
l
hide stock field in
e
dit se
q
inf
o
dia
l
og
commit
|
commitdiff
|
tree
2020-03-13
afpowell
additi
o
nal fixes to dialo
g
box
commit
|
commitdiff
|
tree
2020-03-13
afp
o
we
l
l
a
d
d ftp and ncbi links to sequen
c
ed
a
ccession inf
o
commit
|
commitdiff
|
tree
2020-03-13
a
f
p
o
w
ell
set up cache fo
r
g
was
commit
|
commitdiff
|
tree
2020-03-04
a
fpowell
Merge p
u
ll
r
e
quest
#
2821 from so
l
gen
o
mics/topic/mason_utf8
commit
|
commitdiff
|
tree
2020-02-19
afpowell
us
e
u
niqueness to ensur
e
sequencing ent
r
ies
o
nly
appear
.
.
.
commit
|
commitdiff
|
tree
2020-02-19
afpowe
l
l
put old sequencing tab
l
e material
i
n the
se
q
acce
s
sions
.
.
.
commit
|
commitdiff
|
tree
2020-02-04
af
p
owell
add s
e
quenced a
c
c
essions to sg
n
t
o
olb
a
r
commit
|
commitdiff
|
tree
2020-02-04
afpowell
f
ix
lin
k
t
o stock detai
l
s page
commit
|
commitdiff
|
tree
2020-02-03
afpowell
f
ix typ
e
i
n
stderr
commit
|
commitdiff
|
tree
2020-02-03
afpowe
l
l
use CXGN S
t
ock se
q
uenc
i
ngInfo
commit
|
commitdiff
|
tree
2020-02-03
afp
o
well
fix t
y
po and some
fo
r
matting in transfer_genome_project_in
f
o
.
.
.
commit
|
commitdiff
|
tree
2020-01-06
afpow
e
ll
set up d
o
s
age
matrix down
l
oad using iterator
commit
|
commitdiff
|
tree
2020-01-06
af
p
owell
Change output to show germplasmName ins
t
ead of germplasmDbId
commit
|
commitdiff
|
tree
2020-01-04
afpowell
A
d
d GT an
d
additi
o
nal info to vcf
i
f ava
i
lable
commit
|
commitdiff
|
tree
2019-12-30
afpowell
retur
n
filehandl
e
instead of fi
l
epath for vcf
commit
|
commitdiff
|
tree
2019-12-30
afpowell
intial s
e
t up of V
C
F w
r
i
t
ten
b
y itera
t
or
commit
|
commitdiff
|
tree
2019-12-27
afpowell
fix merge conflict of cache file
commit
|
commitdiff
|
tree
2019-12-26
afpowel
l
include genotyp
e
s
e
a
rch ca
c
he file system
commit
|
commitdiff
|
tree
2019-12-26
afpow
e
ll
Mer
g
e pull r
e
qu
e
st #2743 from solgen
o
mics/topic/cache_f
i
le_s
.
.
.
commit
|
commitdiff
|
tree
2019-12-23
afpowell
Merge branc
h
'
m
as
t
er' into to
p
ic/wizard_g
e
n
o
type_down
l
oad_la
.
.
.
commit
|
commitdiff
|
tree
2019-12-06
af
p
owell
Mer
g
e pull request
#
2
7
15
f
r
om solgenomi
c
s/topic/solg
s
.
.
.
commit
|
commitdiff
|
tree
2019-11-26
a
f
p
o
we
l
l
a
l
ter to use the tran
s
pos
i
tion scrip
t
in bin, not
g
b
s
.
.
.
commit
|
commitdiff
|
tree
2019-11-26
afpowell
alter format of
vcf-like output
commit
|
commitdiff
|
tree
next