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add POD to the load_trait_props.pl script.
2023-03-08
Lukas Mueller
add POD to the load_t
r
ait_props
.
p
l scrip
t
.
commit
|
commitdiff
|
tree
2023-02-16
L
u
k
a
s Mueller
tweak login system calls again
.
commit
|
commitdiff
|
tree
2023-02-15
Lukas Mueller
fix an issue with t
h
e
/user/logged_in aj
a
x ca
l
l
.
commit
|
commitdiff
|
tree
2023-02-13
L
u
kas Mue
l
ler
fix ta
b
le creation f
o
r access
i
on associated with t
r
at
i
s
.
commit
|
commitdiff
|
tree
2023-02-13
Lukas Mueller
change the query for the accession
c
o
u
n
t per
cvterm
.
commit
|
commitdiff
|
tree
2023-02-12
Lukas Mueller
r
e
mov
e
NA
values
f
rom result file that wou
l
d interfere
.
.
.
commit
|
commitdiff
|
tree
2023-02-11
Lu
k
as Mueller
remove
stray d
e
b
ugg
i
n
a
lert
that interferes with seleni
u
m
.
.
.
commit
|
commitdiff
|
tree
2023-02-11
Lukas Mueller
call t
h
e
new
ac
c
ess
o
r f
o
r the plot numbering scheme
.
commit
|
commitdiff
|
tree
2023-02-11
L
ukas Muelle
r
m
odify tr
i
al tes
t
to also test
a
consecu
t
ive plot numbe
r
ing
.
.
.
commit
|
commitdiff
|
tree
2023-02-11
Lukas Mu
e
ller
add a plot numbering scheme type
.
commit
|
commitdiff
|
tree
2023-02-07
Lukas
M
ueller
Merge branch
'master' into topic/
c
onsecu
t
i
v
e_pl
o
t_numb
e
rin
g
_
.
.
.
commit
|
commitdiff
|
tree
2023-02-07
L
uk
a
s Mu
e
ller
remove debugg
i
n aler
t
s
.
commit
|
commitdiff
|
tree
2023-02-03
Lukas
Muell
e
r
rename
ac
c
essor in mo
r
e log
i
c
a
l
way, adapt code
.
commit
|
commitdiff
|
tree
2023-02-01
Lukas Mueller
also ret
u
rn url
for hist
o
gra
m
.
commit
|
commitdiff
|
tree
2023-01-31
Amber Lockrow
fix conflicts from cherry
-
pick
o
f
78e
f
2
7
5
c
2fe998c788f979c
8
5c
.
.
.
commit
|
commitdiff
|
tree
2023-01-31
Lukas
M
u
eller
attempt to fix th
e
issu
e
wit
h
wrong h
e
aders after mixe
d
.
.
.
commit
|
commitdiff
|
tree
2023-01-25
Lukas Muell
e
r
b
a
ck
u
p commit
commit
|
commitdiff
|
tree
2023-01-23
Lukas
M
ueller
tweak RCBD plu
g
in
.
commit
|
commitdiff
|
tree
2023-01-11
Luka
s
Muelle
r
Merge branch 'topi
c
/fix_catalog_ord
e
r_test'
into t
o
pic
.
.
.
commit
|
commitdiff
|
tree
2023-01-11
L
u
kas Mueller
add a
selection
t
o trial workflow to all
o
w
c
o
n
secutive
.
.
.
commit
|
commitdiff
|
tree
2022-12-20
Lukas Muel
l
er
remove
wind
o
ws style line e
n
dings for a
b
etter user
.
.
.
commit
|
commitdiff
|
tree
2022-12-13
L
u
kas M
u
eller
make
h
e
aders co
n
sistent and check for correctness of
.
.
.
commit
|
commitdiff
|
tree
2022-12-13
Lukas Mueller
fix issues
rai
s
ed by Ti
t
im
a
a
n
d A
d
rian
.
commit
|
commitdiff
|
tree
2022-12-12
Lukas Mueller
f
ix problem with
d
i
sappea
r
ing format dialog b
o
x
.
commit
|
commitdiff
|
tree
2022-12-12
Lukas Mueller
M
e
r
ge b
r
anch
'
master' in
t
o topic/rena
m
e_accession_ui
commit
|
commitdiff
|
tree
2022-12-12
Lukas
M
uelle
r
Use CXGN::Stock::Ac
c
ession i
n
stead of C
X
G
N::Stock,
.
.
.
commit
|
commitdiff
|
tree
2022-12-12
Luk
a
s Mueller
r
e
move
sy
n
onym fro
m
Stock again
- it
is in the
s
ubclass
.
.
.
commit
|
commitdiff
|
tree
2022-12-11
Luk
a
s Mu
e
ller
fix
t
ypo
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas Muelle
r
a
d
d
a
s
e
nte
n
ce about th
e
req
u
i
r
ed permissions
commit
|
commitdiff
|
tree
2022-12-11
L
ukas Mueller
add
a ph
r
ase whe
r
e
t
o
find the re
n
aming
t
o
o
l
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas Mu
e
ller
add the
j
avascript f
o
r the accession re
n
a
m
i
n
g feature
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas Mueller
add the AJAX co
n
troller for acc
e
ssion
renaming
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas Mueller
add files required for
renami
n
g acc
e
ssion t
e
s
t
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas
M
ue
l
ler
add
man
u
al entry for acce
s
si
o
n renaming fe
a
ture
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas Mueller
add a
t
est for th
e
accession renaming feature
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas M
u
eller
a
d
d a s
y
n
o
n
y
ms()
a
ccessor (with l
a
z
y
l
oading)
.
commit
|
commitdiff
|
tree
2022-12-11
L
u
k
a
s
Mue
l
ler
need t
o
join
t
o
l
i
nking table, not
the group table
.
.
.
commit
|
commitdiff
|
tree
2022-12-11
Lukas
Mueller
mak
e
the process work, mes
s
ag
e
a
t
end
i
s no
t
ye
t
correct
.
commit
|
commitdiff
|
tree
2022-12-10
Lukas Mueller
allow uniquen
a
m
e as a param
e
ter to the
n
e
w
call for
.
.
.
commit
|
commitdiff
|
tree
2022-12-09
Lukas Mueller
fix tit
l
e in
u
pload screen
.
commit
|
commitdiff
|
tree
2022-12-08
L
u
k
as
M
u
eller
f
ix page ti
t
le
m
a
son ref
.
commit
|
commitdiff
|
tree
2022-12-08
Lu
k
as Muelle
r
ch
a
nge defaul
t
g
r
aft
separator strin
g
from + to
_
on_
.
.
.
commit
|
commitdiff
|
tree
2022-12-08
L
ukas Mueller
fix cannot use undefine
d
value a
s
arr
a
y
r
e
f
err
o
r
.
commit
|
commitdiff
|
tree
2022-12-08
Lukas Mueller
fix check for mis
s
ing graft accessions
.
commit
|
commitdiff
|
tree
2022-12-07
Lu
k
as M
u
e
l
l
er
tweak user inte
r
face
.
commit
|
commitdiff
|
tree
2022-12-07
Lukas Mueller
fix th
e
ot
h
er
f
i
lehandle as well
.
commit
|
commitdiff
|
tree
2022-12-06
Lukas Muel
l
e
r
add vcf
to dosage conv
e
r
s
ion to suppo
r
t vcf
f
iles
.
commit
|
commitdiff
|
tree
2022-12-05
Lukas M
u
eller
instead of dereferencing, r
e
set the fi
l
eh
a
ndle after
.
.
.
commit
|
commitdiff
|
tree
2022-12-05
Chr
i
stine Nyaga
create
d
doc
s
for GCPC tool
commit
|
commitdiff
|
tree
2022-12-05
Christin
e
Nyaga
GCPC test updates
commit
|
commitdiff
|
tree
2022-12-05
C
hristi
n
e Nyaga
GC
P
C test updates
o
n checking is ok
v
alue
commit
|
commitdiff
|
tree
2022-12-05
Christine Nyaga
GCPC test passes a
l
l
tests
commit
|
commitdiff
|
tree
2022-12-05
Christine Nyag
a
use
r
S
exes displ
a
ying or not displaying
commit
|
commitdiff
|
tree
2022-12-01
L
uk
a
s M
u
eller
twe
a
ks an
d
c
ode
c
lea
n
up
.
commit
|
commitdiff
|
tree
2022-12-01
Lukas Mueller
add an
improved stock loading scr
i
pt
.
commit
|
commitdiff
|
tree
2022-11-29
Lukas Mueller
format outpu
t
for data table
.
commit
|
commitdiff
|
tree
2022-11-28
Lukas Mueller
do
not crash when
the
plat
e
does not have
a
n
ass
o
c
i
ate
d
.
.
.
commit
|
commitdiff
|
tree
2022-11-28
L
u
kas Muel
l
er
mo
v
e
sim
s
earch f
u
nctiona
l
ity to restful inte
r
fa
c
e
.
commit
|
commitdiff
|
tree
2022-11-15
Lukas Mueller
addi
n
g start
o
f
a new ajax simsearch interface
.
commit
|
commitdiff
|
tree
2022-11-10
L
u
kas Mueller
tweak the manual entry for
gr
a
fting
.
commit
|
commitdiff
|
tree
2022-11-09
Lukas Mueller
add a se
c
tion about
graf
t
s
.
commit
|
commitdiff
|
tree
2022-11-09
Luka
s
Mueller
f
ix par
s
ing of graft
s
alrea
d
y sto
r
ed
.
commit
|
commitdiff
|
tree
2022-11-09
L
u
k
a
s
M
ueller
remove code duplication in gr
a
ft va
l
idation
.
commit
|
commitdiff
|
tree
2022-11-09
Lukas Mueller
r
e
move debugging alert
s
.
commit
|
commitdiff
|
tree
2022-11-09
Lukas Mueller
Tweak
graft upload; fix a variable declaration that
.
.
.
commit
|
commitdiff
|
tree
2022-11-08
Lukas
M
ueller
fix p
a
r
a
met
e
r n
a
mes in js for gr
a
ft up
l
oad
.
commit
|
commitdiff
|
tree
2022-11-08
L
ukas Muelle
r
a t
e
st fi
l
e for t
h
e upl
o
ad g
r
a
fts test
.
commit
|
commitdiff
|
tree
2022-11-08
Lukas Muell
e
r
u
p
l
o
ad
grafts t
e
st
.
commit
|
commitdiff
|
tree
2022-11-08
Lu
k
as Mueller
M
e
rge br
a
nch '
m
aster' int
o
t
o
pic/add_graft
i
n
g_tool
commit
|
commitdiff
|
tree
2022-11-08
Luk
a
s Mueller
parse sess
i
on_id
.
commit
|
commitdiff
|
tree
2022-11-08
Lukas Muel
l
e
r
add
a
scr
i
pt to send passwords
.
commit
|
commitdiff
|
tree
2022-11-07
Lukas Mueller
a
dd pod to load_people
.
p
l script
.
commit
|
commitdiff
|
tree
2022-11-07
Lukas M
u
eller
a
d
d
a
s
cr
i
pt to load user
acco
u
nts
.
Req
u
ires Cr
y
pt
.
.
.
commit
|
commitdiff
|
tree
2022-11-06
Lukas Muel
l
e
r
tr
y
ing to get the gr
a
f
ting mech test to work
.
commit
|
commitdiff
|
tree
2022-11-03
Lu
k
as
Mueller
M
erge
b
ranch 'master' into topic/add_graf
t
ing_tool
commit
|
commitdiff
|
tree
2022-11-02
Lukas
M
ueller
add root
s
tock and scion to pedigree BrA
P
I ca
l
l
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas
M
ue
l
ler
add
rootsto
c
k and
s
cion relationships
.
commit
|
commitdiff
|
tree
2022-11-02
Luk
a
s Mu
e
lle
r
fix que
r
y
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas Mueller
add gr
a
fting ty
p
es to get ancestors f
u
nction
.
commit
|
commitdiff
|
tree
2022-11-02
L
ukas Mue
l
ler
fi
x
l
ogic of error pushi
n
g
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas Muell
e
r
fix na
m
e
of archive f
i
le
key
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas Mu
e
ller
debug info
.
commit
|
commitdiff
|
tree
2022-11-02
L
u
kas Mueller
add debug
i
nfo
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas M
u
e
l
l
er
t
w
eak filename
p
arsing
.
commit
|
commitdiff
|
tree
2022-11-02
Luk
a
s Mue
l
l
er
fix re
t
urn path for archived file
.
commit
|
commitdiff
|
tree
2022-11-02
L
u
kas Mueller
fix t
y
po in stock find
query
.
commit
|
commitdiff
|
tree
2022-11-02
Lu
k
a
s
Mue
l
ler
chomp
header l
i
ne
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas Mueller
improve parsing o
f
he
a
d
e
r
.
commit
|
commitdiff
|
tree
2022-11-02
L
u
kas Mu
e
l
l
e
r
adapt d
e
scrip
t
ion of graft upload format
.
commit
|
commitdiff
|
tree
2022-11-02
Lukas Muell
e
r
use
correct g
r
af
t
s
eparato
r
string co
n
fig
k
ey
.
commit
|
commitdiff
|
tree
2022-11-01
Lu
k
as Muell
e
r
Me
r
ge branch 'master' into t
o
pic/ad
d
_gra
f
ting_tool
commit
|
commitdiff
|
tree
2022-11-01
Luka
s
Mueller
add forgo
t
te
n
UploadGrafts
.
js
.
commit
|
commitdiff
|
tree
2022-10-29
L
ukas
Mue
l
ler
bi
n
/download_genotypes
.
p
l
commit
|
commitdiff
|
tree
2022-10-27
L
u
kas
M
uelle
r
allow download o
f
all accessions in a protocol by not
.
.
.
commit
|
commitdiff
|
tree
2022-10-27
Lukas Muell
e
r
fix
p
ath
s
in Simsearch, add script to down
l
oad gen
o
types
.
commit
|
commitdiff
|
tree
2022-10-27
Lukas Mu
e
ller
ad
d
a script
to download ge
n
otypes
.
commit
|
commitdiff
|
tree
2022-10-27
Lukas Muelle
r
tweak referen
c
e file h
a
n
dlin
g
.
commit
|
commitdiff
|
tree
2022-10-27
Lukas
M
ueller
add upload file mason component
.
commit
|
commitdiff
|
tree
2022-10-27
Lukas Mueller
Merge branch 'master' into topic/simsearch
_
u
i
commit
|
commitdiff
|
tree
2022-10-27
Lukas M
u
eller
tweaks to
input p
a
ge
.
commit
|
commitdiff
|
tree
next