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added ontology subtitle when user is not logged in
2011-03-23
Naam
a
Menda
a
dded ontology subtitle when u
s
er
is
not log
g
ed
i
n
commit
|
commitdiff
|
tree
2011-03-23
Naa
m
a M
e
nda
no ne
e
d
to add to the p
h
eno
t
ype hash i
f
a
pr
o
ject has
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Naama
M
en
d
a
h
a
v
e
to
c
all jQue
r
y
.
n
o
C
onflict()
b
e
c
ause
o
f clobber
i
n
g
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Naam
a
M
en
d
a
a
d
ded search pa
r
a
m
eters for trai
t
, min , and
m
ax
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
db
patch for
adding page c
o
mmen
t
s on stock
a
nd samp
l
e
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
fi
x
ed link
to stock page
commit
|
commitdiff
|
tree
2011-03-22
Naam
a
Menda
fixed
a
mbi
g
uous column c
a
ll
commit
|
commitdiff
|
tree
2011-03-22
Naama Men
d
a
fixed
name search
to
r
eturn only distinct
stock
s
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
a
ddin
g
create_date for ontolo
g
y
anno
t
ations an
d
d
ispla
y
ing
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
a hack for generating the links to the qtl analy
s
i
s
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
db patch for applying expli
c
it population types
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
added checking if a p
o
pulation stock has qtls, prin
t
ing
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Naama
M
end
a
a
d
ded missing use
o
f
in
f
o_ta
b
l
e
_html
commit
|
commitdiff
|
tree
2011-03-21
N
a
a
ma Menda
added me
m
ber phe
n
otypes p
r
inting and
g
enot
y
pe map
commit
|
commitdiff
|
tree
2011-03-18
Na
a
m
a
M
e
nda
w
o
r
king
on a
d
ding
phenotypes
o
f member st
o
ck
s
commit
|
commitdiff
|
tree
2011-03-18
Naama
M
enda
added
o
p
tio
n
t
o p
r
i
n
t
link to the QTL pages from the
.
.
.
commit
|
commitdiff
|
tree
2011-03-18
Na
a
m
a
Menda
fixed
che
c
k fo
r
existing annotation evidence codes
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
Naama Menda
r
e
factored o
n
t
o
logy annotations t
o
load into stock
_
cvterm
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
N
a
a
m
a Menda
forgot
t
o grant pe
r
missions to web_usr on the new stock_
c
vte
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
Naam
a
Menda
db patch for al
t
e
red
chado s
c
hem
a
.
Table stock_cvter
m
p
r
op
.
.
.
commit
|
commitdiff
|
tree
2011-03-15
N
a
am
a
Menda
fixed stock sea
r
hc by name
o
r
syn
o
nym
commit
|
commitdiff
|
tree
2011-03-13
Naama Menda
added the ontology form
evidence
s
to
t
h
e
a
s
so
c
iate
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Na
a
ma M
e
nda
r
e
moved unnecessar
y
code
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
r
emov
e
d unused code
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
added
t
h
e
evidence com
p
onents to
the on
t
ology ann
o
tation
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama M
e
nda
removed unnecessary code
commit
|
commitdiff
|
tree
2011-03-10
Naa
m
a Menda
a
dded backend functions for fetch
i
ng r
e
l
ations
h
ips
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
added a gene
t
ic functio
n
for filling
d
rop do
w
n
menus
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama
M
en
d
a
a
dd
e
d
a "deprecate
d
" m
e
ssage
commit
|
commitdiff
|
tree
2011-03-10
N
a
ama Menda
Merge branch 'topic/fix_stock_pa
g
e'
commit
|
commitdiff
|
tree
2011-03-09
N
a
ama
M
end
a
added more advanced search
options
commit
|
commitdiff
|
tree
2011-03-09
Naama M
e
n
da
fixed ontology dis
p
lay, a
n
d begining of working ontolo
g
y
.
.
.
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
adde
d
s
t
ock_dbxrefs
to th
e
sta
s
h
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
fix
e
d doc
u
mnetation
commit
|
commitdiff
|
tree
2011-03-09
Naama Me
n
da
added cal
l
ing t
h
e ontolo
g
y mason component
commit
|
commitdiff
|
tree
2011-03-09
Naama M
e
nda
a
d
ded
a deprecat
e
d message
commit
|
commitdiff
|
tree
2011-03-04
Naama Menda
f
ixed b
u
g
i
n stock dbxref hash
.
The val
u
es need to
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
Naam
a
Me
n
da
r
edi
r
ecting individual a
n
d population pages
to
t
he
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
Na
a
m
a
M
e
nda
warning squash
commit
|
commitdiff
|
tree
2011-03-04
N
a
ama Menda
f
ixed
bug in
o
bjec
t
sent
to cvterm_lin
k
function
.
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
N
aama Menda
fixed
p
rinting of phenotypes by
p
roj
e
ct, and
n
ot by
.
.
.
commit
|
commitdiff
|
tree
2011-03-02
Naama Menda
bug fix
.
Ne
e
d
to us
e
a BCS Cvterm object with cvterm_link
commit
|
commitdiff
|
tree
2011-02-24
Na
a
m
a
Menda
fixed startin
g
a
nd c
l
osing tag
commit
|
commitdiff
|
tree
2011-02-22
Naama
Me
n
da
db
p
ath to
a
ccommodate
q
tl maps and
ma
r
k
ers
commit
|
commitdiff
|
tree
2011-02-21
Naama Menda
f
ixed assign_owner script to work w
i
th roles table
.
.
.
commit
|
commitdiff
|
tree
2011-02-21
Naam
a
M
e
nda
cleani
n
g up unused js code
commit
|
commitdiff
|
tree
2011-02-09
Naama Menda
ren
a
med t
r
ait tab
commit
|
commitdiff
|
tree
2011-02-09
Naama Menda
add
e
d
u
ndef option
t
o allele mode o
f
inh
e
ritance
commit
|
commitdiff
|
tree
2011-01-24
Naama M
e
nd
a
ad
d
ed
s
ome more documentation
commit
|
commitdiff
|
tree
2011-01-24
Naama Menda
d
o
cu
m
entat
i
o
n
for
j
a
v
ascript form obje
c
t
commit
|
commitdiff
|
tree
2011-01-24
N
aama Men
d
a
rel
a
xe
d
no
t
n
ull
con
s
trai
n
t
commit
|
commitdiff
|
tree
2011-01-19
Naama
Men
d
a
fixed
snp
column to stock_id to c
o
rresp
o
nd to its
natur
a
l
F
K
commit
|
commitdiff
|
tree
2011-01-07
Naama
M
end
a
a
dded eXtension tut
o
r
ials
to
t
he Br
e
ed
e
r
s
Too
l
b
ox p
a
ge
commit
|
commitdiff
|
tree
2010-12-13
Naama Menda
added displ
a
ying of
related st
o
c
k
s from
s
tock_relationship
.
.
.
commit
|
commitdiff
|
tree
2010-12-09
Naama Menda
forgo
t
to reference the marker_id
i
n
the sn
p
table
commit
|
commitdiff
|
tree
2010-12-08
N
aama Men
d
a
removed hardcoding of live si
t
e from the mar
k
ers
i
c
o
n
.
.
.
commit
|
commitdiff
|
tree
2010-12-08
Naama Menda
fixed a bug in im
a
ge
t
ag
scri
p
t
commit
|
commitdiff
|
tree
2010-12-07
Naama Menda
fixed
join
commit
|
commitdiff
|
tree
2010-12-07
N
aama Menda
fixed
t
he way maps
are displayed
.
H
ad to sort by species
.
.
.
commit
|
commitdiff
|
tree
2010-12-07
Naama
Me
n
da
f
ixing
st
o
re
fun
c
tion
.
Had to overr
i
de store i
n
the
.
.
.
commit
|
commitdiff
|
tree
2010-12-07
Naama Menda
fixed ajax
t
est and missing for
m
closing tag fro
m
a
jax
.
.
.
commit
|
commitdiff
|
tree
2010-12-07
Naama M
e
nda
f
i
xed ajax
t
est of t
h
e image form
commit
|
commitdiff
|
tree
2010-12-06
Naama
Menda
db patch for
the t
o
bac
c
o and po
t
ato maps
commit
|
commitdiff
|
tree
2010-12-06
Naama Menda
fixed PO
D
f
o
r
map loading script
commit
|
commitdiff
|
tree
2010-12-06
Naama Menda
r
emoved m
a
p list f
r
om maps an
d
marke
r
s
m
en
u
commit
|
commitdiff
|
tree
2010-12-02
Naa
m
a
Menda
fixed bug with
n
ew locus f
o
rm
, and hidding info sec
t
ions
.
.
.
commit
|
commitdiff
|
tree
2010-12-02
Naa
m
a Menda
removed dummy
r
o
o
t
n
ode , and a
d
ded an
o
ption for expanding
.
.
.
commit
|
commitdiff
|
tree
2010-12-01
N
a
ama Menda
re
m
oved
c
urrently un-used browse
-
alphabetica
l
l
y section
commit
|
commitdiff
|
tree
2010-12-01
Naama M
e
n
d
a
search
tabs for future
r
e
f
actoring o
f
the dire
c
t_search
.
.
.
commit
|
commitdiff
|
tree
2010-12-01
Naa
m
a Menda
c
o
n
troller for
trait search
commit
|
commitdiff
|
tree
2010-12-01
Naama Menda
s
e
parate
d
qt
l
from
trait sear
c
h
commit
|
commitdiff
|
tree
2010-11-29
Naama Menda
Merge
bra
n
ch 'master' of
git
h
ub
.
co
m
:s
o
lgeno
m
ics/
s
g
n
.
.
.
commit
|
commitdiff
|
tree
2010-11-29
Naam
a
M
e
n
da
allowing displa
y
of onto browser
f
or Relat
i
onship
Ontology
commit
|
commitdiff
|
tree
2010-11-29
Naama Menda
sepa
r
ating
qtl search
f
rom
t
r
ait search
commit
|
commitdiff
|
tree
2010-11-23
Naama
M
enda
fixe
d
a
t
ypo
in storing
t
he or
g
anism
i
d
for the
map
.
.
.
commit
|
commitdiff
|
tree
2010-11-23
N
a
ama Menda
fixed a typ
o
in stock na
m
e creation
commit
|
commitdiff
|
tree
2010-11-23
Naama
Menda
removed forward_to
_
mason_view
commit
|
commitdiff
|
tree
2010-11-20
Naam
a
Menda
Me
r
ge
bran
c
h 'master' of github
.
com:
s
olgenomics/sgn
.
.
.
commit
|
commitdiff
|
tree
2010-11-20
N
aama Menda
example
f
or trait
search using
the ontology browser
commit
|
commitdiff
|
tree
2010-11-20
Naam
a
Mend
a
now the nam
e
/uniqu
e
name se
a
rch should work
commit
|
commitdiff
|
tree
2010-11-20
N
aa
m
a Men
d
a
fixed search by name
q
uery to
se
a
rc
h
the n
a
me
or
t
he
.
.
.
commit
|
commitdiff
|
tree
2010-11-20
Naama
Menda
for
g
ot
t
o grant permi
s
sions t
o
web_us
r
commit
|
commitdiff
|
tree
2010-11-20
Naama Menda
ad
d
ed assay info for S
N
P and Indel markers
commit
|
commitdiff
|
tree
2010-11-20
Naam
a
Menda
typo c
a
u
s
e
d no
t
l
o
adin
g
a
spe
primers
commit
|
commitdiff
|
tree
2010-11-17
Naama Me
n
da
typ
o
commit
|
commitdiff
|
tree
2010-11-17
Naama Menda
this wa
s
not
w
orking because some experiments have
.
.
.
commit
|
commitdiff
|
tree
2010-11-17
N
a
a
ma Menda
fil
t
ering pcr experi
m
e
n
t
s
a
lread
y
displayed
on the
.
.
.
commit
|
commitdiff
|
tree
2010-11-17
N
aama Menda
m
oved some more code
to th
e
cont
r
olle
r
commit
|
commitdiff
|
tree
2010-11-17
Na
a
m
a
Menda
test for
t
he stoc
k
search
commit
|
commitdiff
|
tree
2010-11-17
N
a
ama Menda
added new
f
unction
for di
s
playing a
n
ew-sto
c
k form
commit
|
commitdiff
|
tree
2010-11-17
N
aama Menda
added
a
h
i
dden
f
ield for organism_id
commit
|
commitdiff
|
tree
2010-11-17
Naama Menda
f
i
xed b
u
g , no user obj
e
ct
if not lo
g
g
ed in
commit
|
commitdiff
|
tree
2010-11-16
N
aama Menda
mo
v
ed code from mason to the
stock control
l
er
commit
|
commitdiff
|
tree
2010-11-16
N
aama Menda
M
erge
b
ranch '
m
a
ster' o
f
github
.
com:s
o
lgenomics/
s
g
n
.
.
.
commit
|
commitdiff
|
tree
2010-11-16
Naama Mend
a
mo
v
ed st
o
ck
.
pl code to the s
t
ock co
n
troller
commit
|
commitdiff
|
tree
2010-11-16
Naama Menda
remo
v
ed
re
d
undan
t
test
.
The stock
s
ea
r
ch
i
s in
t
/stock/
commit
|
commitdiff
|
tree
2010-11-16
Naama M
e
nda
a
d
ded use warnings
commit
|
commitdiff
|
tree
2010-11-16
N
aama Menda
remove
d
rema
i
ns from conflict
commit
|
commitdiff
|
tree
2010-11-16
Na
a
ma Men
d
a
removed co
m
mented out code
commit
|
commitdiff
|
tree
2010-11-16
Naama Menda
fixed tests for the onto browser , n
o
w not hardcoding
.
.
.
commit
|
commitdiff
|
tree
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