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2011-01-22	Jonathan "Duke"...	Modernize cosii_submission	commit \| commitdiff \| tree
2011-01-22	Jonathan "Duke"...	perltidy on t/integration/contact.t	commit \| commitdiff \| tree
2011-01-20	Jonathan "Duke"...	Perltidy t/cview/map.t	commit \| commitdiff \| tree
2011-01-20	Jonathan "Duke"...	Fix SGN::Build::Changelog tests	commit \| commitdiff \| tree
2011-01-20	Jonathan "Duke"...	Fix sequence API tests	commit \| commitdiff \| tree
2011-01-13	Jonathan "Duke"...	Fix error count and remove some commented-out code	commit \| commitdiff \| tree
2011-01-13	ray	Requirements fixed	commit \| commitdiff \| tree
2011-01-13	ray	Updates to Contact page.	commit \| commitdiff \| tree
2011-01-13	ray	Updates to Contact page.	commit \| commitdiff \| tree
2011-01-13	rayleigh	Contact page.	commit \| commitdiff \| tree
2011-01-13	ray	Forgot to add a mason component needed.	commit \| commitdiff \| tree
2011-01-13	ray	Another update of test	commit \| commitdiff \| tree
2011-01-13	ray	Another update of test	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test again	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page-Updated test	commit \| commitdiff \| tree
2011-01-13	ray	New Contact Page	commit \| commitdiff \| tree
2010-12-09	Jonathan "Duke"...	Ignore some temp data files	commit \| commitdiff \| tree
2010-12-07	Jonathan "Duke"...	Add a trait_list.pl validation test	commit \| commitdiff \| tree
2010-12-07	Jonathan "Duke"...	Add some more QTL search validation tests	commit \| commitdiff \| tree
2010-12-07	Jonathan "Duke"...	Create a new test file for search validation tests...	commit \| commitdiff \| tree
2010-12-07	isaak	cvterms_search.pl is renamed qtl_search.pl..	commit \| commitdiff \| tree
2010-12-07	isaak	renamed cvterms_search.pl to qtl_search.pl..	commit \| commitdiff \| tree
2010-12-07	isaak	naming qtl, phenotype tabs differently..	commit \| commitdiff \| tree
2010-12-07	isaak	text editing and function name changes to describe...	commit \| commitdiff \| tree
2010-12-07	isaak	traits with qtls only are shown; now, unique traits...	commit \| commitdiff \| tree
2010-12-01	Jonathan "Duke"...	Add basic test for /tools/wait.pl	commit \| commitdiff \| tree
2010-12-01	Jonathan "Duke"...	Bring /tools/wait.pl into the modern age	commit \| commitdiff \| tree
2010-12-01	Jonathan "Duke"...	Add a test for organism_link	commit \| commitdiff \| tree
2010-12-01	Jonathan "Duke"...	Add a test for cvterm_link	commit \| commitdiff \| tree
2010-12-01	Jonathan "Duke"...	Make feature links use id's, since names aren't unique...	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Prefetch some cvterms in the exon result set	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Pass along featurelocs in general feature pages too	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Use a once block in related features component	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Properly iterate over featurelocs when looking up site...	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Cache featurelocs in the Catalyst stash	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Prefetch cvterms when requesting genes. Gene pages...	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Prefetch some featureloc_features	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Make gene.mas more readable and remove cruft	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Give a more useful error message when the R version...	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Cache featurelocs in a few more places	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Put module use in a once block on the gene page	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Start caching featurelocs so we don't recalculate them...	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Make gene.mas more readable and remove cruft	commit \| commitdiff \| tree
2010-11-30	Jonathan "Duke"...	Give a more useful error message when the R version...	commit \| commitdiff \| tree
2010-11-29	Jonathan "Duke"...	Get rid of warning in Build.PL when R is not installed	commit \| commitdiff \| tree
2010-11-24	Jonathan "Duke"...	Update Phenome validation test since p_marker changed...	commit \| commitdiff \| tree
2010-11-24	Jonathan "Duke"...	Improve the AddUserRoles dbpatch slightly	commit \| commitdiff \| tree
2010-11-24	Jonathan "Duke"...	Move the AddUserRoles dbpatch to the correct directory	commit \| commitdiff \| tree
2010-11-23	Jonathan "Duke"...	Fix bootstrapping problem with Parse::Deb::Control	commit \| commitdiff \| tree
2010-11-23	Jonathan "Duke"...	Add a dep for a specific version of version	commit \| commitdiff \| tree
2010-11-19	Jonathan "Duke"...	Fix some uniquename/name bugs in stock search, added...	commit \| commitdiff \| tree
2010-11-18	Jonathan "Duke"...	Allow creation of test Cvtermpath objects	commit \| commitdiff \| tree
2010-11-18	Jonathan "Duke"...	Allow creation of test Stock objects	commit \| commitdiff \| tree
2010-11-18	Jonathan "Duke"...	Return a ghosted 'Not Available' link when GBrowse...	commit \| commitdiff \| tree
2010-11-19	Jonathan "Duke"...	Make stock search integration test use test Stock objects	commit \| commitdiff \| tree
2010-11-19	Jonathan "Duke"...	Allow creation of test Stock objects	commit \| commitdiff \| tree
2010-11-19	Jonathan "Duke"...	Move stock search tests to t/integration	commit \| commitdiff \| tree
2010-11-16	Jonathan "Duke"...	Add more SGN::Test::Data tests to verify the correct...	commit \| commitdiff \| tree
2010-11-16	Jonathan "Duke"...	Add some tests for generating cvterms tied to one cv...	commit \| commitdiff \| tree
2010-11-13	Jonathan "Duke"...	Merge branch 'clean_buildpl'	commit \| commitdiff \| tree
2010-11-12	Jonathan "Duke"...	Clean up our Build.PL	commit \| commitdiff \| tree
2010-11-12	Jonathan "Duke"...	Remove redundant deps in Build.PL	commit \| commitdiff \| tree
2010-11-06	Jonathan "Duke"...	Merge branch 'topic/new_indexes_dbpatch'	commit \| commitdiff \| tree
2010-11-05	Jonathan "Duke"...	Fix the description of the dbpatch	commit \| commitdiff \| tree
2010-11-05	Jonathan "Duke"...	Add a dbpatch which adds missing indexes	commit \| commitdiff \| tree
2010-11-05	Jonathan "Duke"...	Reorganizize some dbpatches and add a README	commit \| commitdiff \| tree
2010-11-05	Jonathan "Duke"...	Proper text alignment is next to godliness	commit \| commitdiff \| tree
2010-11-05	Jonathan "Duke"...	Remove unnecessary use'd module	commit \| commitdiff \| tree
2010-11-03	Jonathan "Duke"...	Add throw_client_error convenience function	commit \| commitdiff \| tree
2010-10-15	Jonathan "Duke"...	Give subsequences more informative fasta id's in the...	commit \| commitdiff \| tree
2010-10-15	Jonathan "Duke"...	Get rid of schema attribute	commit \| commitdiff \| tree
2010-10-15	Jonathan "Duke"...	Get rid of unnecessary variable in SGN::Controller...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Remove duplicate half-working sequence code in the...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Use the Sequence API for the fasta download link on...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Allow a single range to be specified in the sequence...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Use the stash to store the feature when rendering a...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Add more sequence API tests for content type and length	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Add a test that verifies more about the sequence in...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Initial implementation of a Sequence controller, with...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Prevent BioPerl exceptions when rendering feature sequences...	commit \| commitdiff \| tree
2010-10-14	Jonathan "Duke"...	Add a test for 'Related Features' on the gene page	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Render identifier links in the description of features	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	UI for extracting upstream/downstream promoters of...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Render coordinates in the feature data section. There...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	No borders on info_tables on the feature page	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Commify numbers in feature tables	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Remove is_subsection from the feature_data info_table	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Default to zero in more places, to protect against...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Make feature integration tests pass; leto--	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Allow creation of Sequence::FeatureRelationship's test...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Improve the creation of test Cv::Cv objects and related...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Improve the creation of test dbxrefs and related test	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	Allow test cvterms to be tied to dbxrefs, and allow...	commit \| commitdiff \| tree
2010-10-08	Jonathan "Duke"...	SGN::Test::Data can now create features tied to specific...	commit \| commitdiff \| tree
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