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Enable a simple test for CXGN::Page::Form::Static
2010-06-28
D
u
ke Leto
Enable a
s
imple t
e
st for CXGN::
P
age::Form::Static
commit
|
commitdiff
|
tree
2010-06-28
Duke Leto
Refactor pr
i
nt_json i
n
CXGN
:
:
Page::Form::Aj
a
xF
o
rmPage
commit
|
commitdiff
|
tree
2010-06-18
Duke
L
eto
Refactor
a
Cview
t
est and get rid of a war
n
ing
commit
|
commitdiff
|
tree
2010-06-18
Duk
e
L
eto
St
e
a
l
paginati
o
n_co
n
trol
.
mas
f
rom topic
/
organism_search
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Duke Le
t
o
Get rid of some warning
s
in gene_family_info
.
mas
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Pr
o
perly
skip
s
ome vali
d
ation t
e
sts and
m
a
k
e
.
/
B
u
ild
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
D
uke Leto
Ma
k
e a test file f
o
r the QTL analysis pag
e
that
s
kips
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Re
f
a
c
tor va
l
idation of
u
r
ls into a
m
odule, SGN::Test
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Remove AUTO_U
R
LS feat
u
r
e
f
r
o
m validate_all
.
t, which
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
C
l
ean
up v
a
l
i
date_all
.
t
some mor
e
and remove dea
d
code
commit
|
commitdiff
|
tree
2010-06-16
D
u
k
e Leto
C
l
eanup t/va
l
idate_all
.
t
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Add blib/* to
.
gitignore
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Re-enabl
e
th
e
use of
.
/B
u
i
l
d test
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Fix the
Q
TL
t
e
s
t
commit
|
commitdiff
|
tree
2010-06-16
Duke Leto
Add a basic test for qtl
.
pl
commit
|
commitdiff
|
tree
2010-06-16
D
u
ke Let
o
C
h
e
ck f
o
r pop_i
d
in qt
l
.
p
l and throw
a
n erro
r
i
f
not
.
.
.
commit
|
commitdiff
|
tree
2010-06-11
Du
k
e L
e
to
Convert
a
2-arg open in SGN
:
:Co
n
t
roller::Clone::Genomic
.
.
.
commit
|
commitdiff
|
tree
2010-06-11
Duke Leto
Clean up C
X
GN::C
v
ie
w
:
:
Chromosome::ITAG, g
e
t rid
o
f
.
.
.
commit
|
commitdiff
|
tree
2010-06-11
Duke
Leto
Conve
r
t to a
3
-
arg
open with a bet
t
er error message
.
.
.
commit
|
commitdiff
|
tree
2010-06-11
Du
k
e Leto
Convert 2-arg
o
pen to 3-arg in CXGN::T
r
an
s
cript
:
:Dr
a
wConti
g
Align
commit
|
commitdiff
|
tree
2010-06-11
Duke Le
t
o
Con
v
ert 2-a
r
g open's i
n
CXG
N
::Genef
a
mil
y
to sl
u
rp
commit
|
commitdiff
|
tree
2010-06-11
D
uke Leto
Clean up
SGN::Image and convert a 2-arg open to
3-a
r
g
commit
|
commitdiff
|
tree
2010-06-11
Duke Leto
Get rid of 2-arg op
e
n in CXGN:
:
Bulk
commit
|
commitdiff
|
tree
2010-06-10
Duke Leto
C
o
nvert a 2-arg ope
n
to 3-
a
rg with basic error
h
a
n
dling
commit
|
commitdiff
|
tree
2010-06-10
D
u
ke Le
t
o
Im
p
rove muscle bi
n
ary detecti
o
n
commit
|
commitdiff
|
tree
2010-06-09
Duke Leto
A
dd
s
ome mo
r
e align_v
i
e
wer tests, whi
c
h depend
o
n the
.
.
.
commit
|
commitdiff
|
tree
2010-06-09
D
uke L
e
t
o
Replace another instance of open with slurp
in a
l
ign_viewer
commit
|
commitdiff
|
tree
2010-06-09
Duke
L
eto
A
d
d a test f
o
r
th
e
basic
a
l
i
gnmen
t
exampl
e
commit
|
commitdiff
|
tree
2010-06-09
Duke Leto
Use Fi
l
e
:
:Sl
u
rp
instead of open
(
)
commit
|
commitdiff
|
tree
2010-06-08
Duke Leto
Fix a ty
p
o in t
h
e POD of t/tools/align_view
e
r
.
t
commit
|
commitdiff
|
tree
2010-06-08
D
uke Leto
More tests fo
r
align_v
i
ewer and
add Tes
t
::Cl
a
ss as
.
.
.
commit
|
commitdiff
|
tree
2010-06-08
Duke
L
eto
Add t
e
sts fo
r
v
a
lid input to align_viewe
r
commit
|
commitdiff
|
tree
2010-06-08
D
uke Let
o
Refa
c
tor get_arguments cal
l
commit
|
commitdiff
|
tree
2010-06-08
Duke
Leto
Add basic tests for align_view
e
r
commit
|
commitdiff
|
tree
2010-06-08
Duke Leto
Fix i
n
correct de
a
th mes
s
age in t/b
u
lk
.
t
commit
|
commitdiff
|
tree
2010-06-08
Duke Leto
R
ealign and cleanup v
a
lida
t
e_all
.
t
commit
|
commitdiff
|
tree
2010-06-08
Duke
L
eto
Fi
x
e
d
link to japan
.
p
l, closes #998
commit
|
commitdiff
|
tree
2010-05-27
Du
k
e Le
t
o
Only
l
oa
d
CXGN
.
Effects
o
nce
o
n the u
n
igene_build
d
e
tail
.
.
.
commit
|
commitdiff
|
tree
2010-05-27
Duke Leto
O
nly load JS libs once i
n
unigene_
d
etail
.
mas
commit
|
commitdiff
|
tree
2010-05-24
Duk
e
Leto
Remove some more use
l
ess debu
g
o
u
tput, but refra
i
n
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
D
u
ke Le
t
o
Clean up some
of the Bulk modules
commit
|
commitdiff
|
tree
2010-05-21
Duk
e
Leto
Im
p
rove bulk
.
t and a
d
d a test for un
i
g
e
ne_
c
onvert
commit
|
commitdiff
|
tree
2010-05-18
D
uke Leto
Get rid
of de
a
d
code and
r
emove
p
rint to ST
D
ERR
commit
|
commitdiff
|
tree
2010-05-18
Du
k
e
Leto
Revert 6a9a05
5
c
c, which accid
e
ntally undid a bunc
h
.
.
.
commit
|
commitdiff
|
tree
2010-05-18
Duke Leto
Fix bulk
.
t
commit
|
commitdiff
|
tree
2010-05-14
Duke Let
o
A
d
d
vim swap files
t
o
.
g
itignore
commit
|
commitdiff
|
tree
2010-05-05
Jonathan
"
D
uke"
.
.
.
Improve
.
g
i
t
ignore
commit
|
commitdiff
|
tree
2010-05-05
Jonath
a
n "Duke"
.
.
.
Refactor mason/search/index
.
mas
commit
|
commitdiff
|
tree
2010-04-28
Jonathan "Duke"
.
.
.
Prevent /cgi-bin/b
u
lk/download
.
pl fr
o
m se
n
din
g
error
.
.
.
commit
|
commitdiff
|
tree
2010-04-28
Jonathan "Duke
"
.
.
.
Add a
n
ote abou
t
the entire CX
G
N::Page module being
.
.
.
commit
|
commitdiff
|
tree
2010-04-28
Jonathan "Duke"
.
.
.
Preven
t
SGN::Excep
t
ion fr
o
m
generating
warnin
g
s
commit
|
commitdiff
|
tree
2010-04-28
Jonathan "
D
uke"
.
.
.
Make
t
/bulk
.
t pas
s
commit
|
commitdiff
|
tree
2010-04-26
Jonath
a
n "Duke"
.
.
.
Fix
wordi
n
g of default
n
ews string in news
.
mas
commit
|
commitdiff
|
tree