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2010-06-11	Duke Leto	Convert a 2-arg open in SGN::Controller::Clone::Genomic...	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Clean up CXGN::Cview::Chromosome::ITAG, get rid of...	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Convert to a 3-arg open with a better error message...	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Convert 2-arg open to 3-arg in CXGN::Transcript::DrawContigAlign	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Convert 2-arg open's in CXGN::Genefamily to slurp	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Clean up SGN::Image and convert a 2-arg open to 3-arg	commit \| commitdiff \| tree
2010-06-11	Duke Leto	Get rid of 2-arg open in CXGN::Bulk	commit \| commitdiff \| tree
2010-06-10	Duke Leto	Convert a 2-arg open to 3-arg with basic error handling	commit \| commitdiff \| tree
2010-06-10	Duke Leto	Improve muscle binary detection	commit \| commitdiff \| tree
2010-06-09	Duke Leto	Add some more align_viewer tests, which depend on the...	commit \| commitdiff \| tree
2010-06-09	Duke Leto	Replace another instance of open with slurp in align_viewer	commit \| commitdiff \| tree
2010-06-09	Duke Leto	Add a test for the basic alignment example	commit \| commitdiff \| tree
2010-06-09	Duke Leto	Use File::Slurp instead of open()	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Fix a typo in the POD of t/tools/align_viewer.t	commit \| commitdiff \| tree
2010-06-08	Duke Leto	More tests for align_viewer and add Test::Class as...	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Add tests for valid input to align_viewer	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Refactor get_arguments call	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Add basic tests for align_viewer	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Fix incorrect death message in t/bulk.t	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Realign and cleanup validate_all.t	commit \| commitdiff \| tree
2010-06-08	Duke Leto	Fixed link to japan.pl, closes #998	commit \| commitdiff \| tree
2010-05-27	Duke Leto	Only load CXGN.Effects once on the unigene_build detail...	commit \| commitdiff \| tree
2010-05-27	Duke Leto	Only load JS libs once in unigene_detail.mas	commit \| commitdiff \| tree
2010-05-24	Duke Leto	Remove some more useless debug output, but refrain...	commit \| commitdiff \| tree
2010-05-24	Duke Leto	Clean up some of the Bulk modules	commit \| commitdiff \| tree
2010-05-21	Duke Leto	Improve bulk.t and add a test for unigene_convert	commit \| commitdiff \| tree
2010-05-18	Duke Leto	Get rid of dead code and remove print to STDERR	commit \| commitdiff \| tree
2010-05-18	Duke Leto	Revert 6a9a055cc, which accidentally undid a bunch...	commit \| commitdiff \| tree
2010-05-18	Duke Leto	Fix bulk.t	commit \| commitdiff \| tree
2010-05-14	Duke Leto	Add vim swap files to .gitignore	commit \| commitdiff \| tree

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