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add option (-v) to add more new markers to a given map_version.
2011-02-01
muell
e
r
Gener
a
t
i
ng new and
u
pdati
n
g existing rec
o
rds corre
c
tly
commit
|
commitdiff
|
tree
2011-01-31
m
ueller
c
o
mmitti
n
g the
r
e
s
o
l
v
e
d
conf
l
ict
commit
|
commitdiff
|
tree
2011-01-31
mu
e
ller
oops, fi
x
ing compil
e
time problem
commit
|
commitdiff
|
tree
2011-01-31
m
u
eller
adding more control over h
o
w
butto
n
s are d
i
splayed
.
commit
|
commitdiff
|
tree
2011-01-31
mueller
adding a +- working
or
g
anism proje
c
t metadata inter
f
ace
.
commit
|
commitdiff
|
tree
2011-01-26
muel
l
er
wo
r
k in prog
r
e
ss
commit
|
commitdiff
|
tree
2011-01-20
m
ueller
fixi
n
g
a bug that returned the wro
n
g user_
t
ypes (not
.
.
.
commit
|
commitdiff
|
tree
2011-01-20
muel
l
er
edits
in mason vie
w
s
commit
|
commitdiff
|
tree
2011-01-20
mueller
adding a
RE
S
T fu
n
c
tion
f
or re
t
rievin
g
organis
m
p
r
oject
.
.
.
commit
|
commitdiff
|
tree
2011-01-14
mueller
adding a tgr
c
logo f
o
r the homepage, making the
l
i
nk
.
.
.
commit
|
commitdiff
|
tree
2011-01-10
mue
l
ler
(too?) simple com
p
onent to display a tax
o
nomy
lineage
commit
|
commitdiff
|
tree
2011-01-10
mueller
generating a mas
o
n-based or
g
ani
s
m view
commit
|
commitdiff
|
tree
2010-12-29
muelle
r
Merge branch 'maste
r
' int
o
topic/a
j
ax_organism
commit
|
commitdiff
|
tree
2010-12-29
mueller
removing a
c
cidentally committed files
.
commit
|
commitdiff
|
tree
2010-12-29
muell
e
r
wo
r
k
in pr
o
gress on cata
l
yst-
b
ased or
g
anism det
a
il
.
.
.
commit
|
commitdiff
|
tree
2010-12-13
mueller
addin
g
an eva
l
to preve
n
t pa
g
e errors
commit
|
commitdiff
|
tree
2010-12-13
mueller
oopes - fixing the m
a
p link
commit
|
commitdiff
|
tree
2010-12-13
mue
l
l
e
r
ad
d
ing a
r
e
ference t
o
submit maps
commit
|
commitdiff
|
tree
2010-12-13
mueller
ad
d
ing
a
b
l
urp about
c
ommunity curatio
n
commit
|
commitdiff
|
tree
2010-12-10
m
u
eller
work in progress on organism detail page
commit
|
commitdiff
|
tree
2010-12-10
mueller
m
oving the other_
l
inks
.
txt to the shared
dir
f
o
r eas
i
er
.
.
.
commit
|
commitdiff
|
tree
2010-12-06
mueller
added a "se
a
rch markers
.
.
.
" menu item to the maps and
.
.
.
commit
|
commitdiff
|
tree
2010-12-02
muel
l
er
correcting the path of the intern
f
iles
commit
|
commitdiff
|
tree
2010-12-02
m
u
e
ll
e
r
adding informa
t
ion to
the outreach page about the new
.
.
.
commit
|
commitdiff
|
tree
2010-11-30
mueller
a
dding
i
nternship 2011 info to out
r
each
page
commit
|
commitdiff
|
tree
2010-11-30
muell
e
r
letting
c
urators
a
ccess the g
e
n
efamily pa
g
e even wit
h
out
.
.
.
commit
|
commitdiff
|
tree
2010-11-30
muelle
r
adding
a
g
enefamily i
n
te
g
ration test
commit
|
commitdiff
|
tree
2010-11-29
mueller
adding
a
n addit
i
onal "align" button for d
a
t
a
sets that
.
.
.
commit
|
commitdiff
|
tree
2010-11-29
mueller
fixing a po
s
t u
r
l
;
ad
d
ing SOL-10
0
to
t
he menu
commit
|
commitdiff
|
tree
2010-11-29
mueller
R
evert
"
fixing the
n
ame
of
the gene fam
i
l
y
files to
.
.
.
Signed-off-by:
mueller
<lam87@cornell.edu>
commit
|
commitdiff
|
tree
2010-11-29
mueller
Rev
e
rt "
f
ix
i
ng t
h
e name
a
gain
.
.
.
"
Signed-off-by:
mueller
<lam87@cornell.edu>
commit
|
commitdiff
|
tree
2010-11-29
mueller
fixing the name again
.
.
.
commit
|
commitdiff
|
tree
2010-11-29
muell
e
r
fixing the name of the gene family
fil
e
s to co
r
respo
n
d
.
.
.
commit
|
commitdiff
|
tree
2010-11-23
mu
e
ller
t
r
yin
g
to get the ajax controller to
w
o
r
k
commit
|
commitdiff
|
tree
2010-11-15
m
u
el
l
e
r
ada
p
ting to the mips naming con
v
e
n
tion
commit
|
commitdiff
|
tree
2010-11-10
mueller
a
dding some li
m
ited
pod wi
t
h a reference to the Catalyst
.
.
.
commit
|
commitdiff
|
tree
2010-11-09
mueller
creating a catalyst-style
us
e
r
o
bject upon every
r
equ
e
st
.
.
.
commit
|
commitdiff
|
tree
2010-11-08
mueller
a db patch
for adding
user roles
commit
|
commitdiff
|
tree
2010-11-08
m
ueller
adding a test
f
or onto browser back end scripts (the
.
.
.
commit
|
commitdiff
|
tree
2010-11-05
mueller
u
s
e a REST controller for
p
ro
c
essing organism-related
.
.
.
commit
|
commitdiff
|
tree
2010-11-04
mueller
s
w
itc
h
ing AjaxReq
u
ests
t
o ge
t
method (d
e
f
ault seems
.
.
.
commit
|
commitdiff
|
tree
2010-11-04
muel
l
er
moving the code und
e
r t
h
e cor
r
e
c
t
http act
i
on functions
commit
|
commitdiff
|
tree
2010-11-04
mu
e
ller
small change
t
o pod
commit
|
commitdiff
|
tree
2010-11-04
Lukas Mueller
fixing ty
p
os in Build
.
PL
commit
|
commitdiff
|
tree
2010-11-04
Lu
k
as
M
u
el
l
er
f
i
x
i
ng
mi
s
sing comma in
Build
.
PL
commit
|
commitdiff
|
tree
2010-11-04
mueller
imple
m
enting the ca
c
he action
w
ith BCS
commit
|
commitdiff
|
tree
2010-11-03
mueller
starting to convert the c
o
ntroller to BCS
.
A
d
ded an
.
.
.
commit
|
commitdiff
|
tree
2010-11-02
mueller
adding Catal
y
st::Control
l
er
:
:REST as
a
d
ependency to sgn
commit
|
commitdiff
|
tree
2010-11-02
mueller
cachin
g
imp
l
ementation seems
to work now, resulting
.
.
.
commit
|
commitdiff
|
tree
2010-11-01
Lukas
Muel
l
er
substituting the ancestors func
t
ion, which has myst
e
riously
.
.
.
commit
|
commitdiff
|
tree
2010-10-27
mueller
adding the
latest
S
OL newsletter
commit
|
commitdiff
|
tree
2010-10-26
mue
l
ler
fixin
g
and ada
p
ting tes
t
for
ajax i
m
age function
commit
|
commitdiff
|
tree
2010-10-26
muell
e
r
sq
u
ashed warni
n
g
commit
|
commitdiff
|
tree
2010-10-25
muelle
r
now also completely removes th
e
added image to
the
.
.
.
commit
|
commitdiff
|
tree
2010-10-25
mueller
adding a change in web_usr acc
e
ss
p
r
ivil
e
ges to
t
he
.
.
.
commit
|
commitdiff
|
tree
2010-10-25
mueller
testing the com
p
lete i
m
ag
e
upload
commit
|
commitdiff
|
tree
2010-10-25
mueller
naming th
e
form
so t
h
e test can easily reference it
commit
|
commitdiff
|
tree
2010-10-25
mue
l
ler
m
oving s
o
me stuff from CXGN::Image
commit
|
commitdiff
|
tree
2010-10-22
m
ueller
adding login verif
i
cati
o
n at each upload step and red
i
rect
.
.
.
commit
|
commitdiff
|
tree
2010-10-22
mueller
fixing the
i
nsitu ima
g
e
s
commit
|
commitdiff
|
tree
2010-10-22
muelle
r
Merge bran
c
h 'top
i
c/imag
e
_upload'
o
f githu
b
.
com:solgenomics
.
.
.
commit
|
commitdiff
|
tree
2010-10-22
mueller
a
dapting
to new const
r
u
c
t
o
r params of CXG
N
::Image
commit
|
commitdiff
|
tree
2010-10-22
mueller
a patch to
a
dd a
m
d5sum field to t
h
e
m
d_image tabl
e
.
commit
|
commitdiff
|
tree
2010-10-22
muel
l
er
ref
a
ctor
i
ng of
S
GN:
:
Image in conju
n
ction with p
a
r
e
nt
.
.
.
commit
|
commitdiff
|
tree
2010-10-22
mu
e
ller
adapti
n
g
to th
e
n
e
w
co
n
struc
t
or
p
arameters
o
f
CXGN
.
.
.
commit
|
commitdiff
|
tree
2010-10-21
mue
l
ler
adaptin
g
to function now returning im
a
ge id instead
.
.
.
commit
|
commitdiff
|
tree
2010-10-19
muelle
r
prov
i
ding names for
tests
commit
|
commitdiff
|
tree
2010-10-19
mue
l
le
r
rerou
t
ing image adding to
n
ew ca
t
a
lyst
ve
r
sion"
commit
|
commitdiff
|
tree
2010-10-19
m
ueller
a
d
d
i
ng t
h
e Catalyst::Plugin::Re
d
i
rect dependency
commit
|
commitdiff
|
tree
2010-10-19
muel
l
er
re-imple
m
enting
the image upload in
c
atalyst
commit
|
commitdiff
|
tree
2010-10-18
mueller
A
c
a
talyst controller
f
or th
e
o
ntology ajax queries
.
commit
|
commitdiff
|
tree
2010-10-18
mueller
cha
n
g
ing the b
a
ckend and s
o
m
e caching pr
o
perties o
f
.
.
.
commit
|
commitdiff
|
tree
2010-09-24
mueller
M
e
rge bra
n
ch
'
to
p
ic/map_overview'
o
f
g
i
t
hu
b
.
com:solge
n
omics
.
.
.
commit
|
commitdiff
|
tree
2010-09-24
muel
l
er
f
ixi
n
g h
o
w the map
g
lyph is
c
alled
.
commit
|
commitdiff
|
tree
2010-09-24
mueller
adapted ho
w
t
he in
d
ivid
u
al overview i
s
instan
t
iat
e
d
commit
|
commitdiff
|
tree
2010-09-24
muel
l
er
added a
clear
button
commit
|
commitdiff
|
tree
2010-09-24
m
u
eller
add
e
d an exa
m
p
l
e
commit
|
commitdiff
|
tree
2010-09-24
m
u
eller
adding a fo
r
m name for
t
estin
g
purp
o
s
e
s
commit
|
commitdiff
|
tree
2010-09-24
m
uelle
r
a test
for c
v
iew
commit
|
commitdiff
|
tree
2010-09-06
mueller
adde
d
a link
t
o
a potat
o
p
h
l
oem proje
c
t as
r
e
quested
.
.
.
commit
|
commitdiff
|
tree
2010-08-06
muelle
r
replace a table alt attribut
e
with
t
he corr
e
ct summar
y
.
.
.
commit
|
commitdiff
|
tree
2010-08-05
mueller
completi
n
g the overlay function
.
commit
|
commitdiff
|
tree
2010-08-04
mueller
fixing a file name (thanks to Joyce
for poin
t
ing it
.
.
.
commit
|
commitdiff
|
tree
2010-08-04
m
ueller
removing
file of unknown function
commit
|
commitdiff
|
tree
2010-08-04
mueller
addin
g
b
a
ck the outreach page link to the homepage
.
.
.
commit
|
commitdiff
|
tree
2010-08-04
mueller
addi
n
g
t
he "
o
verlay"
f
eature -
other
im
p
r
o
vement
s
commit
|
commitdiff
|
tree
2010-07-21
mueller
fixing the new map
c
reation features
.
commit
|
commitdiff
|
tree
2010-07-14
mueller
add
i
ng a
t
est
f
or the ont
o
logy browser
commit
|
commitdiff
|
tree
2010-07-14
mueller
adding some n
e
wly needed parameter
s
to
t
he constructor
.
commit
|
commitdiff
|
tree
2010-07-09
mueller
a s
e
le
commit
|
commitdiff
|
tree
2010-07-07
muell
e
r
some
s
u
b
t
le
c
h
a
n
ges
to the ap
i
s of o
v
er
v
iews
commit
|
commitdiff
|
tree
2010-07-08
m
u
eller
added the se
c
retom pro
j
ect
back onto the homepage
.
.
.
commit
|
commitdiff
|
tree
2010-07-07
m
uell
e
r
the pr
e
vi
o
us "1" parameter pro
b
ably does
not
m
ean force
.
.
.
commit
|
commitdiff
|
tree
2010-07-07
m
uel
l
er
Merge
bra
n
ch 'mas
t
e
r
'
o
f
g
i
t
h
ub
.
com:
s
olg
e
nomics/sgn
commit
|
commitdiff
|
tree
2010-07-07
m
ue
l
l
er
f
i
xing a problem how web im
a
ge
cache
i
s call
e
d
.
commit
|
commitdiff
|
tree
2010-06-29
mueller
added a sleep interva
l
t
o
allow AJAX function
s
of the
.
.
.
commit
|
commitdiff
|
tree
2010-06-28
mueller
adding some
of t
h
e prop
o
sed env
i
r
on
m
ent
var
i
a
bles
c
ontrollin
.
.
.
commit
|
commitdiff
|
tree
2010-06-28
mueller
added a menu
positi
o
n for exp
r
ess
i
on
.
commit
|
commitdiff
|
tree
2010-06-26
mueller
A
dded a link to the mirror si
t
e
in a new section,
.
.
.
commit
|
commitdiff
|
tree
2010-06-26
mueller
addin
g
the new sol
n
e
w
s
letter
f
or
June
.
commit
|
commitdiff
|
tree
next