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refactor run_model function, so that the analysis is run in the CXGN::MixedModel...
2020-10-29
Lu
k
as Mueller
refactor run_mod
e
l f
u
nction, so that
the analysis is
.
.
.
commit
|
commitdiff
|
tree
2020-10-29
Lu
k
as Muell
e
r
m
ove "next"
b
uttons
to
th
e
r
i
ght
commit
|
commitdiff
|
tree
2020-10-26
Lukas Mueller
feed
correct
values t
o
an
a
l
y
sis
store dialog
.
commit
|
commitdiff
|
tree
2020-10-25
Lukas Mueller
save
onl
y
one column (
a
djusted trait data) for adj
.
.
.
commit
|
commitdiff
|
tree
2020-10-20
Luk
a
s
M
uelle
r
add cv
t
erm
f
or
m
ixed mo
d
el
tool
.
commit
|
commitdiff
|
tree
2020-10-20
Luka
s
Mueller
add
m
ore
e
leme
n
ts to interface w
i
th analysis store
.
.
.
commit
|
commitdiff
|
tree
2020-10-20
Lu
k
as
Mueller
a
d
d stats terms for m
i
xed model tool
.
commit
|
commitdiff
|
tree
2020-10-19
Lukas Mu
e
ller
documentat
i
on up
d
ate for mixed model t
o
ol
.
commit
|
commitdiff
|
tree
2020-10-13
Lukas
Mueller
show app
r
opriate re
s
ult tabs and hide others
.
commit
|
commitdiff
|
tree
2020-10-12
Lukas
Mu
e
ller
fix frame name for BL
U
Es
.
commit
|
commitdiff
|
tree
2020-10-09
Lukas Mueller
twe
a
k
R
script; strange er
r
or
i
n fixed fac
t
or
c
a
lculation
.
.
.
commit
|
commitdiff
|
tree
2020-10-05
L
u
kas Mueller
fix
c
onflict in cx
g
n_statistics
.
obo
commit
|
commitdiff
|
tree
2020-09-28
Lukas Mueller
Merge pull
requ
e
st #3072 fr
o
m
s
olgenomics/topic/fix_ge
n
otype
.
.
.
commit
|
commitdiff
|
tree
2020-09-25
Lukas Mueller
backup c
o
mmit
.
commit
|
commitdiff
|
tree
2020-09-24
Lukas Mueller
Merge pull request #3076 from
s
o
lg
e
nomics/top
i
c/up
d
ate
_
fixtu
.
.
.
commit
|
commitdiff
|
tree
2020-09-24
L
u
kas Mueller
Merge p
u
l
l
request #3080 fr
o
m solgenom
i
c
s/topic
/
update_nirs_
.
.
.
commit
|
commitdiff
|
tree
2020-09-24
Lukas Mueller
Mer
g
e pu
l
l request #
3
084
from solgenom
i
cs/topic
/
genotype_upl
.
.
.
commit
|
commitdiff
|
tree
2020-09-24
L
ukas Mue
l
ler
Merge pull request #3086 from s
o
lgen
o
mics/topic/f
i
x_trial_de
.
.
.
commit
|
commitdiff
|
tree
2020-09-23
L
ukas
Mue
l
ler
show results in tabs
commit
|
commitdiff
|
tree
2020-09-17
L
u
kas Mu
e
ller
Merge pull reque
s
t #
3
075 from solgenom
i
c
s
/topi
c
/fami
l
y_name
commit
|
commitdiff
|
tree
2020-09-17
Lukas Mueller
Merge pull request
#
307
1
fr
o
m solgenomics/topic/nirs_
i
nterface
commit
|
commitdiff
|
tree
2020-09-17
Lukas Mue
l
ler
add back text/html return type
.
commit
|
commitdiff
|
tree
2020-09-15
Lukas
Mueller
st
a
r
t
using
new analysis an
d
model save di
a
log
.
commit
|
commitdiff
|
tree
2020-09-14
L
ukas Muel
l
e
r
Merge pull
request #
3
070 from solgen
o
m
i
cs
/
topic/fix_test
s
commit
|
commitdiff
|
tree
2020-09-14
L
u
kas
M
ueller
Merge branch 'to
p
i
c
/
nirs_interface'
in
t
o t
o
pi
c
/mix
e
d_mo
d
e
l
_a
.
.
.
commit
|
commitdiff
|
tree
2020-09-14
Lukas Mueller
t
weaks
.
commit
|
commitdiff
|
tree
2020-09-14
Lukas Mu
e
ller
Merge branch 'master' in
t
o topic/
m
ixed_model_analyses
commit
|
commitdiff
|
tree
2020-09-14
Lukas Mueller
chang
e
the n
a
me o
f
phenom
e
.
genotype to phenome
.
pheno
m
e_genot
.
.
.
commit
|
commitdiff
|
tree
2020-09-13
Lukas Mueller
Merge branch
'
master' into topic/fix_ajax_encoding
commit
|
commitdiff
|
tree
2020-09-10
Lukas Mueller
add cluster_host
to sgn_fixture_template
.
con
f
commit
|
commitdiff
|
tree
2020-09-10
Lukas
Mu
e
l
ler
M
erg
e
branch
'
master' into t
o
p
ic/fix_ajax_encoding
commit
|
commitdiff
|
tree
2020-09-03
Lukas Muell
e
r
M
erg
e
pull request #
3
05
8
from solgenomics/topic/
q
uality_control
commit
|
commitdiff
|
tree
2020-09-03
Lukas Muell
e
r
Merge pul
l
req
u
est #3060 from
solgenomic
s
/t
o
pic/yamcr
o
ss
commit
|
commitdiff
|
tree
2020-09-03
Lukas M
u
eller
Merge pull re
q
uest #3059
f
rom solgenomics/topic/tr
a
it_se
a
rch
.
.
.
commit
|
commitdiff
|
tree
2020-08-27
Lukas M
u
eller
Merge branch '
m
aste
r
'
i
n
to
t
o
pic/mixed_model_a
n
alyses
commit
|
commitdiff
|
tree
2020-08-27
Luka
s
Muell
e
r
Merge bra
n
ch 'master'
i
nto topic/fix_ajax
_
enco
d
i
n
g
commit
|
commitdiff
|
tree
2020-08-27
Lukas
M
u
eller
Merge
p
ull r
e
quest #3029 from solgenom
i
cs/topic/edit_genotyp
.
.
.
commit
|
commitdiff
|
tree
2020-08-26
Lukas Mueller
Merge pull r
e
qu
e
st
#3048 from sol
g
enomics/topi
c
/
f
ix_submitte
.
.
.
commit
|
commitdiff
|
tree
2020-08-25
Lukas Mueller
Merge pull r
e
ques
t
#3049 fr
o
m s
o
l
gen
o
mi
c
s/t
o
pic/
p
lot_
n
umber_rc
b
d
commit
|
commitdiff
|
tree
2020-08-24
Lukas Mueller
Merge pull request #3046 from solgenomic
s
/t
o
p
i
c/update_fixtu
.
.
.
commit
|
commitdiff
|
tree
2020-08-21
Lukas M
u
el
l
er
Merge
p
ul
l
request #3045 f
r
om solg
e
nomics/topic/gwa
s
_script_
.
.
.
commit
|
commitdiff
|
tree
2020-08-21
Lukas Mue
l
ler
M
erg
e
pu
l
l request #3044 from solgenomics/top
i
c/
a
naly
s
is_uplo
a
d
commit
|
commitdiff
|
tree
2020-08-20
Lukas
M
u
e
l
ler
Merge pu
l
l r
e
quest #3042 fr
o
m s
o
lgenomic
s
/to
p
ic/drone_imager
.
.
.
commit
|
commitdiff
|
tree
2020-08-20
Lukas M
u
el
l
er
M
erge pu
l
l req
u
e
s
t #3043 from T
r
iticeaeToolbox/
t
opic
.
.
.
commit
|
commitdiff
|
tree
2020-08-18
Lu
k
as
Mueller
Merge pull
request #3041 from
so
l
genomi
c
s/topic/sel
e
ct_dataset
commit
|
commitdiff
|
tree
2020-08-17
Lukas Mueller
Me
r
g
e
p
u
l
l re
q
u
est
#3037 from sol
g
enomics/to
p
ic/drone_
i
ma
g
er
.
.
.
commit
|
commitdiff
|
tree
2020-08-17
Lukas Mue
l
ler
Merge pull request #
3
038 from solgenomics/topi
c
/genotype_
s
ea
.
.
.
commit
|
commitdiff
|
tree
2020-08-17
Lukas Mueller
Merge
p
ull request #30
4
0 fr
o
m solgen
o
mi
c
s/topic/brapi_2
.
.
.
commit
|
commitdiff
|
tree
2020-08-17
Luk
a
s Mueller
t
w
eak doc
s
for seed
l
ots for quality and source fe
a
t
u
re
s
.
commit
|
commitdiff
|
tree
2020-08-15
Lukas Mueller
Fi
x
confli
c
ts in so
l
GS a
n
d
B
r
eede
r
sToolbox
.
commit
|
commitdiff
|
tree
2020-08-14
Luk
a
s Mueller
Merge pu
l
l request #3035 f
r
om solgenom
i
cs/topic/ar
u
sha_issues
commit
|
commitdiff
|
tree
2020-08-10
Lukas Mu
e
ller
Merg
e
pull request #3030 f
r
om solgenomics/topi
c
/drone_imager
.
.
.
commit
|
commitdiff
|
tree
2020-08-10
Lu
k
as Muell
e
r
Merge pull request #
3
031
f
rom solgenomics/top
i
c/gwas_pca_fix
commit
|
commitdiff
|
tree
2020-08-07
L
u
kas Muel
l
er
Mer
g
e
pu
l
l reques
t
#3028
f
rom s
o
lgenomi
c
s/topic
/
brapi_2
.
.
.
commit
|
commitdiff
|
tree
2020-08-03
Lu
k
as Mue
l
le
r
Me
r
g
e
pull
r
eque
s
t #3021 fro
m
solgenomics/to
p
ic/upda
t
e_dat
a
b
.
.
.
commit
|
commitdiff
|
tree
2020-08-03
Lukas
M
u
eller
Merge pull
reque
s
t #3023 from solgenomics/topic/drone
_
imager
.
.
.
commit
|
commitdiff
|
tree
2020-08-03
Lukas Mue
l
ler
Merge pull request #3024 from solgenomics/topic
/
sol
g
s
.
.
.
commit
|
commitdiff
|
tree
2020-07-30
L
ukas Muelle
r
Merge pu
l
l
request #3011 from
s
o
l
genomics/topic
/
add_seedl
o
t_
.
.
.
commit
|
commitdiff
|
tree
2020-07-30
L
u
k
as Mueller
M
erge pul
l
r
equest
#
3020 from solgenomics/t
o
p
ic
/
autoenco
d
er_
.
.
.
commit
|
commitdiff
|
tree
2020-07-30
Lukas Mueller
Merge p
u
l
l
re
q
uest
#
3
019 from solgenomics/top
i
c/
m
us
a
_plant_attr
commit
|
commitdiff
|
tree
2020-07-27
Lukas Muell
e
r
set
m
ore file
open encoding to
U
TF-8
.
commit
|
commitdiff
|
tree
2020-07-27
Luk
a
s
M
u
e
ller
Merge bra
n
ch 'maste
r
' into topic/m
i
xed_model_analyses
commit
|
commitdiff
|
tree
2020-07-27
Lukas Mueller
M
e
rge pull request #3001 from solg
e
nomics/top
i
c
/
autoencoder_
.
.
.
commit
|
commitdiff
|
tree
2020-07-27
Luka
s
M
uelle
r
M
erge pull
request #2998
fro
m
so
l
genom
i
cs/topic/brapi
_
2
.
0
commit
|
commitdiff
|
tree
2020-07-27
Lukas
M
ueller
Merge pull request #
3
014
f
rom solgenom
i
c
s
/topic/fix_cross_u
p
load
commit
|
commitdiff
|
tree
2020-07-27
Lukas Mueller
Merge pull requ
e
st #301
5
f
r
om sol
g
enomics/topic/solgs
.
.
.
commit
|
commitdiff
|
tree
2020-07-22
L
u
kas Mueller
Merge pull req
u
est
#
3
012 from solgenomics/topi
c
/wishlist
commit
|
commitdiff
|
tree
2020-07-20
Lukas
M
ueller
add new validat
o
r fo
r
s
eedlot functionality
.
commit
|
commitdiff
|
tree
2020-07-20
Lukas Mueller
a
dd a see
d
lot_quality s
t
ock p
r
op to the database,
upload
.
.
.
commit
|
commitdiff
|
tree
2020-07-20
L
ukas Muel
l
e
r
Mer
g
e pull request #3008
from solgeno
m
ics/t
o
pic/desig
n
_t
y
pe
commit
|
commitdiff
|
tree
2020-07-20
Lukas Mueller
M
e
rge
pull request #3006 from solgenomics
/
topic/f
i
x_gwas_dat
.
.
.
commit
|
commitdiff
|
tree
2020-07-20
L
u
kas
M
ueller
Merge
pull request
#
300
5
fr
o
m
solgenomics/topic/plot_width
commit
|
commitdiff
|
tree
2020-07-16
Lu
k
as
M
u
ell
e
r
Merge pull request
#3004 from solgenomic
s
/topic/fix_manageme
.
.
.
commit
|
commitdiff
|
tree
2020-07-15
Lu
k
as
Mueller
add
quality p
r
o
p
erty to Seedlot
object and test; db
.
.
.
commit
|
commitdiff
|
tree
2020-07-13
L
u
k
as Mueller
fix js
o
n parsing in Seedlot
cont
r
oller
.
commit
|
commitdiff
|
tree
2020-07-13
Luka
s
Muell
e
r
use UT
F
-
8
comp
a
tibl
e
fi
l
e
i/o
.
commit
|
commitdiff
|
tree
2020-07-13
Luka
s
Muell
e
r
use UTF8 compatible JSON parsing
.
commit
|
commitdiff
|
tree
2020-07-13
Lukas
M
u
eller
us
e
utf8 safe JSON parsing based on JSON::
X
S
.
commit
|
commitdiff
|
tree
2020-07-13
Lukas Mueller
fi
x
a UTF8 JSON pa
r
sing issue in the
root controller
.
.
.
commit
|
commitdiff
|
tree
2020-07-09
Lukas Mueller
Me
r
ge
p
ull request #2995
f
rom sol
g
enom
i
cs/
t
o
pic/field_man
a
g
e
.
.
.
commit
|
commitdiff
|
tree
2020-07-09
Lu
k
as
M
uell
e
r
M
e
rge pull requ
e
st #2992 from
s
olgenomics
/
topic/upload_nir
s
_
.
.
.
commit
|
commitdiff
|
tree
2020-07-08
Lukas Mueller
fix lo
c
ation upload for UTF-8 encoded lo
c
atio
n
names
.
commit
|
commitdiff
|
tree
2020-07-08
Lukas Mueller
Merge br
a
nch 'master' into topic
/
fix_
a
ja
x
_encoding
commit
|
commitdiff
|
tree
2020-07-08
L
u
kas M
u
el
l
er
rem
o
ve facebook code
from footer
.
commit
|
commitdiff
|
tree
2020-07-08
Lukas Muell
e
r
fix co
n
flict in Tri
a
l
.
pm
commit
|
commitdiff
|
tree
2020-07-08
Lukas Muell
e
r
remove de
b
ug
m
essages
.
commit
|
commitdiff
|
tree
2020-07-08
L
u
kas Muelle
r
re
m
ove
d
eb
u
g a
l
erts
.
commit
|
commitdiff
|
tree
2020-07-08
L
u
kas Muell
e
r
fix
pe
d
i
g
ree
u
p
load fo
r
U
TF-8 e
n
c
o
ded accession names
.
commit
|
commitdiff
|
tree
2020-07-08
L
ukas
Mu
e
lle
r
remove
p
re tag from
server response; em
b
ed debug message
.
.
.
commit
|
commitdiff
|
tree
2020-07-06
Lukas Mu
e
ller
Merge pull req
u
est #2990 f
r
om solg
e
nom
i
cs/topic/genotyping_f
.
.
.
commit
|
commitdiff
|
tree
2020-07-03
L
uk
a
s Mue
l
ler
Merge
pu
l
l request #29
8
9
fro
m
solg
e
nomics/topic/ge
n
ot
y
ping
_
f
.
.
.
commit
|
commitdiff
|
tree
2020-07-02
Lu
k
a
s
Muel
l
er
Merge pull
r
equest
#
2
9
85 fr
o
m sb2597/Allow-custom-header
.
.
.
commit
|
commitdiff
|
tree
2020-07-02
Lukas M
u
eller
Merge pull requ
e
st #2
9
87
f
rom solgenom
i
cs/t
o
pic/fix_ge
n
o
t
y
pe
.
.
.
commit
|
commitdiff
|
tree
2020-07-02
Luka
s
Mueller
M
erge pull req
u
e
s
t
#2986 from solgenomics/
t
opic/file
_
upload
commit
|
commitdiff
|
tree
2020-06-29
Lukas M
u
eller
Merge
pu
l
l request #29
8
0 from solg
e
nomics/topic/BTract
commit
|
commitdiff
|
tree
2020-06-29
Lukas Mueller
Merg
e
p
u
ll reque
s
t #
2
976
f
rom so
l
ge
n
omics/to
p
i
c
/update_datab
.
.
.
commit
|
commitdiff
|
tree
2020-06-29
Luka
s
Mueller
M
erge pull re
q
u
e
s
t
#2977 from sol
g
e
nomics/t
o
p
ic/cr
o
s
s
_pedigree
commit
|
commitdiff
|
tree
2020-06-28
Lukas Mueller
Merge pull requ
e
st #2975 fr
o
m solgenom
i
cs/topic/file_dump_sh
.
.
.
commit
|
commitdiff
|
tree
2020-06-25
Luk
a
s
Mue
l
l
e
r
Merge pull re
q
ue
s
t #2
9
72 from sb2
5
97/Move-Au
t
hori
z
e
dClien
t
s
.
.
.
commit
|
commitdiff
|
tree
2020-06-24
Luka
s
Mueller
Merge branch 'master' in
t
o
to
p
ic
/
m
i
xed_mod
e
l
_analyses
commit
|
commitdiff
|
tree
next