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solQTL branding..modified description..
2010-11-01
is
a
ak
solQTL
b
ra
n
ding
.
.
m
odified description
.
.
commit
|
commitdiff
|
tree
2010-11-01
isaak
solQ
T
L
b
rand
i
n
g
.
.
commit
|
commitdiff
|
tree
2010-10-29
isaak
peak
c
M pos
i
t
i
on displ
a
ye
d
now also
w
hen the QTL's
.
.
.
commit
|
commitdiff
|
tree
2010-10-29
isaak
a
d
ded
LO
D
scores fo
r
QTL co
n
fiden
c
e
inter
v
al markers
.
.
.
commit
|
commitdiff
|
tree
2010-10-29
isaak
removed
p
rint
.
.
.
.
commit
|
commitdiff
|
tree
2010-10-29
isaak
a
d
ded a LO
D
values column
.
.
commit
|
commitdiff
|
tree
2010-10-29
isaak
declared mo
r
e
global variables; removed arguments from
.
.
.
commit
|
commitdiff
|
tree
2010-10-27
isaak
p
r
inting cgi redirect
.
.
.
f
orwar
d
ing i
t
to mason appears
.
.
.
commit
|
commitdiff
|
tree
2010-10-27
isaak
forgot t
o
c
o
mment out th
e
permuation
v
alue I
use
w
hen
.
.
.
commit
|
commitdiff
|
tree
2010-10-27
i
s
aak
passing to R a file p
a
th for the qtl confidence interval
.
.
.
commit
|
commitdiff
|
tree
2010-10-27
isaak
bayesian confidence in
t
erval markers with
their
ge
n
etic
.
.
.
commit
|
commitdiff
|
tree
2010-10-25
isa
a
k
ed
i
ting
.
.
commit
|
commitdiff
|
tree
2010-10-25
isaa
k
some
re
f
actori
n
g
.
.
commit
|
commitdiff
|
tree
2010-10-25
isaa
k
adde
d
a
n
o
t
e to
t
h
e
in
t
r
o
ductory text
.
.
commit
|
commitdiff
|
tree
2010-10-22
isaak
variable na
m
es
c
hange for re
a
dabil
i
ty
.
.
.
commit
|
commitdiff
|
tree
2010-10-20
isaak
fixe
s
#1288 and some clean u
p
commit
|
commitdiff
|
tree
2010-09-29
i
s
a
a
k
s
tand
a
rdizing
.
.
.
commit
|
commitdiff
|
tree
2010-09-29
isaak
hyperlinked publications t
o
source
s
.
.
.
commit
|
commitdiff
|
tree
2010-09-24
i
sa
a
k
corrected
a
-n
o
t
-
to
-
be-mentioned
typo
.
.
.
commit
|
commitdiff
|
tree
2010-09-24
i
s
a
a
k
added g
e
n
om
e
position section
;
one of th
e
sugg
e
stions
.
.
.
commit
|
commitdiff
|
tree
2010-09-24
isaak
a
new mason com
p
onent
f
o
r displa
y
in
g
gen
o
me position
.
.
.
commit
|
commitdiff
|
tree
2010-09-09
isaak
minor
r
e
fa
c
toring
.
.
commit
|
commitdiff
|
tree
2010-09-07
i
s
aak
add
e
d qt
l
data subsection
.
.
.
commit
|
commitdiff
|
tree
2010-09-02
isaak
expo
r
ting
Catalys
t
c
o
nte
x
t
.
.
qtl_load
.
pl qtl_for
m
.
p
l
commit
|
commitdiff
|
tree
2010-09-02
isaak
exporting
C
atalyst context
.
.
commit
|
commitdiff
|
tree
2010-09-01
isaak
perltidy on qtl
.
pl
.
.
.
w
ith mi
n
o
r manual tidying
.
.
commit
|
commitdiff
|
tree
2010-09-01
isaak
disabled
l
inks to the qtl analysis p
a
ge from the no
.
.
.
commit
|
commitdiff
|
tree
2010-08-31
isaak
some
refactoring of filehandles
.
.
commit
|
commitdiff
|
tree
2010-08-31
i
saak
refacto
r
e
d the
method for creation of r_qtl temp
f
iles
.
.
.
commit
|
commitdiff
|
tree
2010-08-16
isaak
moved the f
u
nction for caching population genotype
.
.
.
commit
|
commitdiff
|
tree
2010-08-10
is
a
ak
R code tidyin
g
.
.
.
commit
|
commitdiff
|
tree
2010-07-27
is
a
ak
edited
t
ypos
in
POD
.
.
commit
|
commitdiff
|
tree
2010-07-26
isaak
added/adju
s
t
e
d data
to be sh
o
wn in the legend
.
.
commit
|
commitdiff
|
tree
2010-07-26
isaak
removed necessity for value
f
o
r LOD argument (some
.
.
.
commit
|
commitdiff
|
tree
2010-07-23
isaak
some c
l
ean
up
.
.
.
commit
|
commitdiff
|
tree
2010-07-23
isaak
sp
e
cifying filehandle
v
ari
a
b
l
e etc
.
.
commit
|
commitdiff
|
tree
2010-07-22
isaak
removed lin
k
to
qtl analysis pag
e
from experment
a
l
.
.
.
commit
|
commitdiff
|
tree
2010-07-17
is
a
a
k
added a m
i
s
si
n
g c
l
osing
quotation
mark on the
l
ink
.
.
.
commit
|
commitdiff
|
tree
2010-07-15
isaa
k
dependi
n
g the on whet
h
er the popu
l
ation a
s
sociated
.
.
.
commit
|
commitdiff
|
tree
2010-07-12
isaak
update
d
the
l
ink
to th
e
qtl data subm
i
ss
i
on guidelines
.
.
commit
|
commitdiff
|
tree
2010-07-09
isaak
restoring changes reverted by 40dbc96
commit
|
commitdiff
|
tree
2010-07-01
isa
a
k
f
ixed a
bug r
e
lated
t
o checking
f
or if
a
popul
a
t
ion
.
.
.
commit
|
commitdiff
|
tree
2010-07-01
isaak
no
w
l
ink to qtl
a
naly
s
i
s
page do
e
s not sh
o
w for p
o
pulatio
n
s
.
.
.
commit
|
commitdiff
|
tree
2010-07-08
isaak
ad
d
ed average va
l
u
e to the discreptive statistics
.
.
.
commit
|
commitdiff
|
tree
2010-07-06
isa
a
k
reforma
t
t
e
d
p
henotype
data
s
ummary presentat
i
on
.
.
commit
|
commitdiff
|
tree
2010-06-25
isaak
chan
g
ed the
a
l
t and ti
t
le tag of phe
n
otype
s
.
pn
g
to
.
.
.
commit
|
commitdiff
|
tree
2010-06-25
isaak
cha
n
ged substitution expression
.
.
as per rbuels
s
ug
g
est
i
o
n
.
.
commit
|
commitdiff
|
tree
2010-06-25
isaak
corrected w
r
ong tickmark for p
r
e
se
n
ce or abs
e
nce of
.
.
.
commit
|
commitdiff
|
tree
2010-06-25
i
s
aak
removed space trailing m
a
rk
e
r na
m
e arguments, in some
.
.
.
commit
|
commitdiff
|
tree
2010-06-22
isaak
dded map s
h
ort
n
ame
t
o
avoid any confusion because
.
.
.
commit
|
commitdiff
|
tree
2010-06-22
isa
a
k
add
e
d
m
ap short name to avoid any conf
u
sion
b
e
cause
.
.
.
commit
|
commitdiff
|
tree
2010-06-18
isaak
clea
n
ed up some commented out cod
e
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
i
s
aak
a general err
o
r m
e
s
sag
e
for missing argum
e
nt(s)
.
.
commit
|
commitdiff
|
tree
2010-06-16
i
s
aak
added a colu
m
n to show the p
e
ak marker is explicitly
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
i
s
aak
peak marker is explicit now
.
.
.
commit
|
commitdiff
|
tree
2010-06-15
i
s
a
ak
up
d
ated help docume
n
t
to
r
efl
e
ct th
e
new fu
n
c
tinalities
.
.
.
commit
|
commitdiff
|
tree
2010-06-15
isaak
a
q
t
l detail pag
e
.
.
commit
|
commitdiff
|
tree
2010-06-15
isaak
new image
o
f
geno
m
e-wide q
t
ls
.
.
t
o
r
ef
l
ect t
h
e new mapping
.
.
.
commit
|
commitdiff
|
tree
2010-06-14
Isaa
k
Y T
e
cle
tabula
r
ized QTL marker d
e
t
ai
l
dat
a
presentation
.
.
commit
|
commitdiff
|
tree
2010-06-14
Isaak Y Tecle
added cM posi
t
ions to QTL
mark
e
rs' detail
s
ection
.
.
.
commit
|
commitdiff
|
tree
2010-06-09
Isaak Y T
e
cle
integrated search f
o
r user submitted trai
t
s, unless
.
.
.
commit
|
commitdiff
|
tree
2010-05-26
Is
a
ak Y Tecle
worde
d
differently
a statistical p
a
ram
f
i
el
d
;
a
dded
.
.
.
commit
|
commitdiff
|
tree
2010-05-25
Isaak Y Tecle
a r
e
direct for the q
t
l
guidelines goog
l
edoc
.
.
commit
|
commitdiff
|
tree
2010-05-25
I
s
aak
Y
Tecle
redirect
s
for qtl guidelines d
o
c
and sear
c
h page
.
.
commit
|
commitdiff
|
tree
2010-05-25
Isaak
Y
Tecle
masoni
z
e
d
it
.
.
.
commit
|
commitdiff
|
tree
2010-05-14
Is
a
ak Y Tecle
adapting
t
he qtl
h
elp page to th
e
ne
w
feat
u
res of the
.
.
.
commit
|
commitdiff
|
tree
2010-05-14
I
saak Y
Tecle
Merge remote br
a
n
ch '
o
ri
g
i
n
/m
a
st
e
r'
commit
|
commitdiff
|
tree
2010-05-14
Isa
a
k Y T
e
cle
just
t
esting
.
.
commit
|
commitdiff
|
tree
2010-05-14
Isaa
k
Y
Tecle
r
everting test code
c
hange
.
.
commit
|
commitdiff
|
tree
2010-05-14
Isaak Yosi
e
f T
e
cle
testin
g
git comm
i
t
.
.
commit
|
commitdiff
|
tree
2010-05-14
Isaak T
e
cle
t
e
s
ting git commit
.
.
commit
|
commitdiff
|
tree
2010-05-12
Isaak Yosief Tec
l
e
corre
c
ted a text on the POD
.
.
commit
|
commitdiff
|
tree
2010-05-12
Isaak Yosief Tecle
improv
e
d legend con
t
ent display
.
.
.
added co
n
tr
o
l
s
tu
c
tures
.
.
.
commit
|
commitdiff
|
tree
2010-05-12
Isaa
k
Y
osief Tecle
implemented single marke
r
QT
L
a
n
alysis
.
.
.
commit
|
commitdiff
|
tree
2010-05-11
I
saa
k
Yosief
Te
c
le
included a 2
.
5 cM genome size option
.
.
commit
|
commitdiff
|
tree
2010-05-11
Isaak Yosief Tecl
e
adde a link
t
o t
h
e map data submissio
n
g
uideli
n
es
.
.
commit
|
commitdiff
|
tree
2010-05-11
Isaak
Y
osief Tecle
some edit
s
.
.
commit
|
commitdiff
|
tree
2010-05-07
I
s
aak Yo
s
ief Te
c
le
removed newline ta
g
.
.
commit
|
commitdiff
|
tree
2010-05-07
Isaak Yosief Tecle
replaced
co
m
ma delimiters with
t
ab
.
.
commit
|
commitdiff
|
tree
2010-05-07
Isaak Yosief Tecle
replaced 'get_e
n
code
d
_ar
g
uments' with
'
g
e
t_
a
ll_encoded_a
r
g
um
.
.
.
commit
|
commitdiff
|
tree
2010-05-07
Isaak Y
o
sief Tecle
added
mi
s
sing u
s
e CXGN
:
:Map (w
a
s crashi
n
g th
e
scrip
t
.
.
.
commit
|
commitdiff
|
tree
2010-05-06
Isaak Yosief
T
e
cle
validate_
a
ll
.
t: added a missing alt tag
that was invalidatin
.
.
.
commit
|
commitdiff
|
tree
2010-05-06
Isaak Yosi
e
f Tecle
added QTL
d
e
tail page (qt
l
.
p
l
), Qt
l
individ
u
als list
.
.
.
commit
|
commitdiff
|
tree
2010-05-06
Isaak Y
o
sief Te
c
le
valida
t
e_all
.
t:
e
d
ited h
t
ml
tags that were failing
.
.
.
commit
|
commitdiff
|
tree
2010-05-05
Isaa
k
Yosief Tecle
displ
a
y
s
a c
o
mment section
.
.
commit
|
commitdiff
|
tree
2010-05-05
I
s
a
ak Yosief Tecle
added a comment s
e
c
tion
.
.
commit
|
commitdiff
|
tree
2010-05-04
Isaak Yosief
T
e
c
l
e
c
o
mmented
out a remnant call to a
f
u
nction
.
.
commit
|
commitdiff
|
tree
2010-05-04
Isaak Yosief
Tec
l
e
added populations list t
o
the personal
page of a sub
m
itter
.
.
.
commit
|
commitdiff
|
tree
2010-05-03
I
s
aak Yosie
f
Tecle
c
ha
n
ged
file names t
o
be dat
a
t
ype
a
nd population d
e
scriptive
.
.
commit
|
commitdiff
|
tree
2010-05-03
Isaak Yosief
T
ecle
added a link to th
e
Q
T
L dat
a
submissio
n
interface
.
commit
|
commitdiff
|
tree
2010-05-03
I
s
a
a
k
Yosief Tecle
a
h
.
.
corrected a typo
.
.
.
commit
|
commitdiff
|
tree
2010-05-03
Isaak Yosief T
e
c
le
added a comm
e
nt
.
.
.
commit
|
commitdiff
|
tree
2010-05-03
Isaak
Y
osief Tecle
h
tml tag edits
.
.
.
commit
|
commitdiff
|
tree
2010-05-03
Isaak Yosief
Tecle
mino
r
edits
.
.
commit
|
commitdiff
|
tree
2010-05-03
Isaak Yosief
Tecle
genoty
p
e downloa
d
script and re
l
a
t
ed
modi
f
icati
o
ns
.
.
commit
|
commitdiff
|
tree
2010-04-27
Isaak Yosief
Tec
l
e
gen
e
tic
m
a
p
is
n
o
w li
n
ked
t
o a
p
o
p
ulation, if applicable
.
.
.
commit
|
commitdiff
|
tree
2010-04-27
I
s
aak Yo
s
ief Tecle
Q
T
L markers
are now hig
h
lighted
o
n
the po
p
ulation
.
.
.
commit
|
commitdiff
|
tree
2010-04-27
Isaak Yosie
f
Tecle
remo
v
ed comment
e
d out code
.
.
commit
|
commitdiff
|
tree
2010-04-26
I
s
aak Yosief Tecle
ad
d
ed a lin
k
to the
QTL
submissi
o
n interf
a
ces
.
.
commit
|
commitdiff
|
tree
2010-04-23
Isaak Yosie
f
Tecle
reordered subse
c
tio
n
s
.
.
commit
|
commitdiff
|
tree
next