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added assay info for SNP and Indel markers
2010-11-20
Naama M
e
nda
added ass
a
y info for SNP and
Indel m
a
rker
s
commit
|
commitdiff
|
tree
2010-11-20
N
aama Menda
t
ypo ca
u
sed not loading aspe primers
commit
|
commitdiff
|
tree
2010-11-17
Na
a
ma Menda
typo
commit
|
commitdiff
|
tree
2010-11-17
Naama Menda
this was no
t
wo
r
kin
g
becaus
e
some expe
r
iment
s
ha
v
e
.
.
.
commit
|
commitdiff
|
tree
2010-11-17
Naama
M
e
n
da
filteri
n
g p
c
r experiments alrea
d
y
displayed
o
n the
.
.
.
commit
|
commitdiff
|
tree
2010-11-17
Naama Menda
m
o
v
e
d
some more cod
e
t
o the con
t
roller
commit
|
commitdiff
|
tree
2010-11-17
Naam
a
Menda
test for
t
h
e
stock sear
c
h
commit
|
commitdiff
|
tree
2010-11-17
Naama Menda
add
e
d
n
e
w
f
u
nction for displayi
n
g
a new-stock form
commit
|
commitdiff
|
tree
2010-11-17
Naama
Menda
add
e
d
a
hidden fiel
d
for organism_id
commit
|
commitdiff
|
tree
2010-11-17
Naama
Menda
fixed bug , no user object if not logged in
commit
|
commitdiff
|
tree
2010-11-16
Naama Men
d
a
m
oved co
d
e fro
m
mason to t
h
e stock controller
commit
|
commitdiff
|
tree
2010-11-16
Naama Menda
Merge branch 'master' of github
.
com:solgenom
i
cs/sgn
.
.
.
commit
|
commitdiff
|
tree
2010-11-16
Naa
m
a Menda
moved stock
.
pl code to the
s
t
ock controller
commit
|
commitdiff
|
tree
2010-11-16
Naama Menda
rem
o
v
ed redundant test
.
The stock sear
c
h is in
t/stock/
commit
|
commitdiff
|
tree
2010-11-16
Na
a
ma Menda
added u
s
e warnings
commit
|
commitdiff
|
tree
2010-11-16
Naa
m
a
M
enda
re
m
oved re
m
ains fro
m
conflict
commit
|
commitdiff
|
tree
2010-11-16
Na
a
ma Menda
removed commented o
u
t
c
o
d
e
commit
|
commitdiff
|
tree
2010-11-16
Naama Me
n
da
fixed tests for
t
he onto browser
, now not h
a
rdcoding
.
.
.
commit
|
commitdiff
|
tree
2010-11-16
Naama
Menda
changed the root nodes to be db na
m
es instead of hardcoding
.
.
.
commit
|
commitdiff
|
tree
2010-11-15
Naa
m
a Mend
a
fi
x
e
d root
n
amespaces for th
e
1
.
280
v
ersion of
S
O,
.
.
.
commit
|
commitdiff
|
tree
2010-11-12
Naama Mend
a
a
d
ded a
test
f
or stock se
a
rc
h
page
commit
|
commitdiff
|
tree
2010-11-11
N
a
ama M
e
nda
fixed sequen
c
e nam
e
s
to SO ter
m
s
commit
|
commitdiff
|
tree
2010-11-11
Naama Menda
Mer
g
e branch 'topic/so
l
cap_marke
r
'
into to
p
ic/sto
c
k
commit
|
commitdiff
|
tree
2010-11-11
Naama Menda
removed de
p
e
n
d
ency o
n
de
l
eted
p
atch
commit
|
commitdiff
|
tree
2010-11-11
Naama M
e
nda
changed sequence
t
ypes to use
SO te
r
ms
commit
|
commitdiff
|
tree
2010-11-11
Naa
m
a Menda
patch to ru
n
after l
o
ading solcap
m
ap
s
.
commit
|
commitdiff
|
tree
2010-11-11
Naam
a
Mend
a
the so
l
cap map
a
nd marker loading scri
p
ts no
w
wo
r
k
.
.
.
commit
|
commitdiff
|
tree
2010-11-10
N
a
ama Menda
working on map and ma
r
ker lo
a
din
g
s
cri
p
t
s
commit
|
commitdiff
|
tree
2010-11-09
Naama
M
enda
loadin
g
s
c
r
ipt
f
or solcap markers
.
Nee
d
to update cxgn
.
.
.
commit
|
commitdiff
|
tree
2010-11-09
Naama
M
enda
a
d
ded more sgn sequence types t
o
db pat
c
h
.
This s
h
oul
d
.
.
.
commit
|
commitdiff
|
tree
2010-11-08
N
aama M
e
nda
Mer
g
e branch '
m
aster' of github
.
com:solge
n
omics/sgn
.
.
.
commit
|
commitdiff
|
tree
2010-11-08
N
a
a
m
a
Menda
f
ix
e
d db patch
commit
|
commitdiff
|
tree
2010-11-08
Naama
M
end
a
Merge remo
t
e
branch
'
or
i
gin/topi
c
/stoc
k
' into topic
.
.
.
commit
|
commitdiff
|
tree
2010-11-08
Naa
m
a
M
enda
added mo
r
e tests for ontology browser backend
commit
|
commitdiff
|
tree
2010-11-04
Naama Menda
added new marker protocols to map loading script
commit
|
commitdiff
|
tree
2010-11-04
Naama
Menda
om
m
itting obsolete cvterms f
r
o
m
the search
commit
|
commitdiff
|
tree
2010-11-04
Naama Men
d
a
added left join to
cvtermsynonym
.
N
o
t all te
r
ms have
.
.
.
commit
|
commitdiff
|
tree
2010-11-04
N
a
ama Menda
f
i
x
e
d a typo in allele e
d
i
t link
commit
|
commitdiff
|
tree
2010-11-04
Naa
m
a Menda
Merge branch 'master'
of github
.
c
o
m:solge
n
o
m
i
c
s/sgn
.
.
.
commit
|
commitdiff
|
tree
2010-11-04
Naama Mend
a
implemented ontology match
f
unction and
converted
.
.
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Me
n
d
a
Merge bran
c
h 'topic/on
t
o
_br
o
wser' of g
i
thub
.
com:so
l
geno
m
ics
.
.
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
Merge remote br
a
nch 'upstream/master'
i
nto topic/onto_browse
r
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
d
b patch delete
d
, and m
o
ve
d
t
o
Pheno
m
e r
e
po wh
e
re i
t
.
.
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
a
dded loa
d
i
ng
s
tock_id in
t
o the acc
e
ssion table
commit
|
commitdiff
|
tree
2010-10-21
Naama Menda
Merge bra
n
ch
'
master'
o
f
gith
u
b
.
c
o
m
:solgenomi
c
s/sg
n
.
.
.
commit
|
commitdiff
|
tree
2010-10-19
Na
a
ma
Me
n
da
n
e
ed to clone the d
b
h, beause DBIC disconnets when
.
.
.
commit
|
commitdiff
|
tree
2010-10-19
Naama Mend
a
br
o
ke
d
b p
a
tch into 2 , since the cr
e
ate t
a
b
le
s
ta
t
emen
t
.
.
.
commit
|
commitdiff
|
tree
2010-10-18
N
a
a
ma Menda
fixed bugs in d
b
patches
commit
|
commitdiff
|
tree
2010-10-18
Naama Menda
a
d
d
ed st
o
ck pag
e
url to
v
ali
d
ate tes
t
commit
|
commitdiff
|
tree
2010-10-18
Naama M
e
nd
a
added test for the stock p
a
ge
commit
|
commitdiff
|
tree
2010-10-18
Naama Men
d
a
moved code from initializ
e
.
mas to index
.
mas
commit
|
commitdiff
|
tree
2010-10-18
Naama Menda
db patch f
o
r copyi
n
g s
g
n
accesss
i
o
n
s i
n
to the stock
.
.
.
commit
|
commitdiff
|
tree
2010-10-18
Naama M
e
nda
added SNP marker type
t
o the
ma
r
k
e
r_
e
xperim
e
nt table
commit
|
commitdiff
|
tree
2010-10-18
Naa
m
a
M
enda
adde
d
a
d
b p
a
tch fo
r
the
new pcr
_
e
xperiment_s
e
quence
.
.
.
commit
|
commitdiff
|
tree
2010-10-13
Naama Menda
ad
d
ed
i
mages secti
o
n to
the stock page
commit
|
commitdiff
|
tree
2010-10-12
N
a
ama Me
n
da
ad
d
ed warning for stori
n
g new image without a valid
.
.
.
commit
|
commitdiff
|
tree
2010-10-11
Naama Menda
added labels for organism and cvterm
type
commit
|
commitdiff
|
tree
2010-10-11
Naama Mend
a
fixed aj
a
x form re
n
dein
g
and editin
g
commit
|
commitdiff
|
tree
2010-10-10
Naa
m
a Menda
merged changes from maste
r
commit
|
commitdiff
|
tree
2010-10-05
Naama Me
n
da
merged commit from topic
/
stock , should hav
e
bee
n
in
.
.
.
commit
|
commitdiff
|
tree
2010-10-05
N
a
ama Mend
a
worki
n
g
wi
t
h a
c
cesso
r
s from the BCS object
commit
|
commitdiff
|
tree
2010-10-05
N
a
ama M
e
nda
Merge
b
ranch 'mas
t
er' into topic/stock
commit
|
commitdiff
|
tree
2010-10-05
Naa
m
a Menda
addin
g
stock_id hidden field
commit
|
commitdiff
|
tree
2010-10-04
Naama Menda
a
dded retur
n
to stock search link
i
n the subti
t
le
commit
|
commitdiff
|
tree
2010-10-03
Naama
M
e
nda
added empty option
s
to organism and t
y
p
e s
e
lects
commit
|
commitdiff
|
tree
2010-10-03
Naama Menda
fixed ajax
i
ntegratio
n
test
commit
|
commitdiff
|
tree
2010-10-03
Naama Menda
calling
g
et_recursiv
e
_
p
aren
t
s from the ontolo
g
y
brows
e
r
.
.
.
commit
|
commitdiff
|
tree
2010-10-02
Naama M
e
nd
a
ad
d
ed
a simple stock search
p
age
commit
|
commitdiff
|
tree
2010-10-02
Naama Menda
fixed bug in checking login when submitting a
new
.
.
.
commit
|
commitdiff
|
tree
2010-10-02
Naam
a
Mend
a
fi
x
ed non-working ontology annotation as
s
o
c
i
a
t
i
on
commit
|
commitdiff
|
tree
2010-09-29
Naama Menda
parent
s
a
r
e now fet
c
hed in
1
query using cvtermpath
commit
|
commitdiff
|
tree
2010-09-28
Naama Men
d
a
f
i
xed e
r
r
ors in s
e
rver side
script
.
The bro
w
s
e
r
se
e
ms
.
.
.
commit
|
commitdiff
|
tree
2010-09-27
N
aama
Me
n
da
using
J
SON obj
e
ct
in ontology browser server sid
e
script
commit
|
commitdiff
|
tree
2010-09-27
N
a
ama Mend
a
merged ch
a
nges from
m
aster
commit
|
commitdiff
|
tree
2010-09-22
Naama Menda
a sample dbp
a
tch using CXGN::
M
etada
t
a
::Dbpatch
commit
|
commitdiff
|
tree
2010-09-22
Naama
M
enda
added
more
f
orm fields to
the
stock page
commit
|
commitdiff
|
tree
2010-09-21
Na
a
ma Me
n
da
ad
d
ed some more features to the stock form
commit
|
commitdiff
|
tree
2010-09-20
Naama Men
d
a
th
e
stock form now
w
orks
commit
|
commitdiff
|
tree
2010-09-20
N
a
ama Menda
removed CGI
commit
|
commitdiff
|
tree
2010-09-20
Naam
a
Menda
fi
x
ed issue with obsol
e
te_object_d
b
xref
.
S
cri
p
t was
.
.
.
commit
|
commitdiff
|
tree
2010-09-19
Naama Me
n
da
trying to g
e
t the stock ajax
f
or t
o
work
commit
|
commitdiff
|
tree
2010-09-19
Naam
a
M
e
nda
a server
side scrip
t
for the stock ajax f
o
rm
commit
|
commitdiff
|
tree
2010-09-19
Naama Menda
f
ixe
d
error mess
a
ge
commit
|
commitdiff
|
tree
2010-09-19
Na
a
m
a Men
d
a
a
d
d
ed a JSON r
e
sponse to server s
i
de
s
c
r
ipt
.
Tryi
n
g
.
.
.
commit
|
commitdiff
|
tree
2010-09-19
N
a
ama Menda
first draft
for a new stock pa
g
e
commit
|
commitdiff
|
tree
2010-09-15
N
a
ama Mend
a
fixed javascript clobberi
n
g in ontology
browser pag
e
commit
|
commitdiff
|
tree
2010-09-15
Naama Mend
a
fix
e
d i
s
s
u
e
w
i
th reloading
p
a
ge aft
e
r obsoleting/uno
b
soletin
.
.
.
commit
|
commitdiff
|
tree
2010-09-15
Naama Menda
fi
x
ed javascript issue with assignin
g
new owner (and
.
.
.
commit
|
commitdiff
|
tree
2010-09-15
Naa
m
a
M
enda
c
u
rator
tools
s
hould
o
nly be visible t
o
c
ura
t
ors
commit
|
commitdiff
|
tree
2010-08-27
Naa
m
a Menda
fixed
bug with addi
n
g
n
ew
synonyms and redir
e
cting
.
.
.
commit
|
commitdiff
|
tree
2010-08-27
Naama Menda
f
i
xed
typo in add new allele l
i
nk
commit
|
commitdiff
|
tree
2010-08-15
Na
a
ma Menda
ne
e
d to use
j
Qury
p
refix for t
h
e autocomplete functio
n
commit
|
commitdiff
|
tree
2010-08-12
Naama Menda
tes
t
for add_organismpr
o
p
.
pl, and made th
e
scr
i
pt
pa
s
s
.
.
.
commit
|
commitdiff
|
tree
2010-08-11
Naama Menda
added use
/
pars
e
_identifier /
commit
|
commitdiff
|
tree
2010-08-11
N
a
ama
M
enda
added use /pars
e
_identifier /
commit
|
commitdiff
|
tree
2010-08-11
Naama Menda
removed
r
edundant cod
e
an
d
print
S
T
DERR
commit
|
commitdiff
|
tree
2010-08-11
Naama Menda
Merge
branch
'
mas
t
e
r
'
o
f github
.
com:
s
olgenom
i
cs/s
g
n
.
.
.
commit
|
commitdiff
|
tree
2010-08-11
Naama Menda
updated subs
e
ction name t
o
Alle
l
s and removed 'Us
e
r
.
.
.
commit
|
commitdiff
|
tree
2010-07-28
Naama Menda
f
i
xin
g
confli
c
ts
commit
|
commitdiff
|
tree
2010-07-28
Na
a
m
a
Menda
perlt
i
d
y
on
add_registry
.
pl
commit
|
commitdiff
|
tree
next