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mason component for printing associated accessions
2010-07-20
Naama Me
n
da
maso
n
compo
n
e
n
t for printing
asso
c
ia
t
ed
accessions
commit
|
commitdiff
|
tree
2010-07-20
Naama Menda
mason component fo
r
prin
t
ing ht
e
ass
o
ciate
a
ccession
.
.
.
commit
|
commitdiff
|
tree
2010-07-20
Naama
Menda
mason component for printi
n
g
t
h
e
allele
s
info table
commit
|
commitdiff
|
tree
2010-07-20
Naama Me
n
da
m
ason
c
o
mpone
n
t for adding new image form
.
This ins
.
.
.
commit
|
commitdiff
|
tree
2010-07-19
Naama Mend
a
a
d
ded
f
igures sect
i
on to mason locus
page
commit
|
commitdiff
|
tree
2010-07-19
N
aama
M
enda
mason
co
m
ponent f
o
r printi
n
g
images on an inf
o
page
commit
|
commitdiff
|
tree
2010-07-19
N
aam
a
M
enda
printing locus histor
y
,
cu
r
ator tools,
editors, and
.
.
.
commit
|
commitdiff
|
tree
2010-07-19
Naa
m
a Menda
mason c
o
mponent for
p
ri
n
ting l
o
cus ed
i
tor info
commit
|
commitdiff
|
tree
2010-07-19
Naama
M
end
a
mas
o
n compon
e
nt f
o
r prin
t
ing locus
history d
a
t
a
commit
|
commitdiff
|
tree
2010-07-19
Na
a
ma
M
enda
mason
componen
t
for printing the locus edits
d
ates
.
.
.
commit
|
commitdiff
|
tree
2010-07-19
Naa
m
a Menda
mason comp
o
nent
for a
s
sign-owner form
commit
|
commitdiff
|
tree
2010-07-18
Naam
a
Men
d
a
printing
m
ap
location and
merge
l
o
cus form on th
e
locu
s
.
.
.
commit
|
commitdiff
|
tree
2010-07-18
Naa
m
a Menda
mason c
o
mponent for printing t
h
e chromosome
g
lyph for
.
.
.
commit
|
commitdiff
|
tree
2010-07-18
N
a
ama
Men
d
a
maso
n
com
p
onent for mergin
g
loci
commit
|
commitdiff
|
tree
2010-07-18
N
a
ama Me
n
da
m
a
s
o
n
component for printing locus
synon
y
ms
commit
|
commitdiff
|
tree
2010-07-18
Naa
m
a
Men
d
a
a
dded logi
n
l
ogic to assoc
i
ate registry form
commit
|
commitdiff
|
tree
2010-07-15
Naama Menda
a
dded to loc
u
s mason page locus detail section sub
t
itles
.
.
.
commit
|
commitdiff
|
tree
2010-07-15
N
a
am
a
Menda
added a component f
o
r
printi
n
g th
e
locus r
e
g
istry associatio
.
.
.
commit
|
commitdiff
|
tree
2010-07-14
Naama Menda
added loc
u
s_id valida
t
ion
commit
|
commitdiff
|
tree
2010-07-13
Na
a
m
a Menda
begining
m
ason locus p
a
ge
commit
|
commitdiff
|
tree
2010-07-13
Naama Men
d
a
fixed #1113
.
Loading new accessions wo
r
ks now
commit
|
commitdiff
|
tree
2010-07-01
Naama Menda
d
e
fau
l
t
b
ehav
i
or
w
hen no specie
s
a
r
e passed
commit
|
commitdiff
|
tree
2010-07-01
Naama
Menda
Merg
e
b
r
an
c
h 'master' of gith
u
b
.
c
o
m
:
solgenom
i
cs/
s
gn
commit
|
commitdiff
|
tree
2010-07-01
N
aa
m
a Menda
added m
i
ssi
n
g arg
commit
|
commitdiff
|
tree
2010-07-01
Naama Menda
ad
d
ed d
e
fau
l
t behavior for
n
o
s
pecies
commit
|
commitdiff
|
tree
2010-07-01
Naama Menda
added miss
i
n
g
a
r
g to associ
a
t
e
_o
n
tology
.
mas
commit
|
commitdiff
|
tree
2010-07-01
Naama Men
d
a
reverting
to older
v
ersion of
jQuery
.
js
.
thic
k
b
ox
.
.
.
commit
|
commitdiff
|
tree
2010-06-30
Naama Menda
fixed issue
with p
r
inting ed
i
t links for owners
commit
|
commitdiff
|
tree
2010-06-24
Naama Menda
fixed a bug in Aj
a
x
FormPage for storing new
objects
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Na
a
m
a
Me
n
da
inst
a
l
led ne version
o
f jQ
u
er
y
.
Needed parseJSON function
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Naama Menda
fixed
test
for
loc
u
s
pa
g
e
.
commit
|
commitdiff
|
tree
2010-06-24
N
a
ama Menda
added a test for
l
ocus_display pag
e
.
For now just
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Naam
a
Menda
fixed a b
u
g
i
n
s
o
rting the pubmed array ref
.
N
eed to
.
.
.
commit
|
commitdiff
|
tree
2010-06-13
Naa
m
a Menda
added line break be
t
ween publications
commit
|
commitdiff
|
tree
2010-06-09
N
a
ama Menda
Merge bra
n
c
h
'master' of github
.
com:
s
olg
e
n
omics/sgn
commit
|
commitdiff
|
tree
2010-06-09
Naam
a
Menda
fixed anchor l
i
nks
commit
|
commitdiff
|
tree
2010-06-08
Naama Menda
M
e
rge branch 'maste
r
' of github
.
c
o
m:so
l
genomics/sgn
commit
|
commitdiff
|
tree
2010-06-08
N
aama M
e
nda
cal
c
ulating ave
r
age value for indiv
i
d
u
a
l
s with multiple
.
.
.
commit
|
commitdiff
|
tree
2010-05-31
Naama
M
enda
sm
a
ll
fi
x
for calling new
N
umbe
r
:
:
Format
commit
|
commitdiff
|
tree
2010-05-28
N
aam
a
Menda
M
e
rge branch 'master' of github
.
c
o
m
:
solgenomics/sgn
commit
|
commitdiff
|
tree
2010-05-28
Na
a
ma Mend
a
tweak
e
d
c
o
de for displaying phenotypes on the indivi
d
ual
.
.
.
commit
|
commitdiff
|
tree
2010-05-22
Naama Menda
M
e
r
g
e
branch 'master' of github
.
com:solgen
o
mics/
s
gn
commit
|
commitdiff
|
tree
2010-05-22
Naama
M
e
nda
moved some stuff
f
r
o
m ajax
p
age
server side sc
r
ipt
.
.
.
commit
|
commitdiff
|
tree
2010-05-22
Na
a
ma Menda
allow
i
ng strin
g
s as locus synonyms
commit
|
commitdiff
|
tree
2010-05-16
Na
a
ma Menda
M
e
rge bra
n
ch 'master' of
g
ithu
b
.
com:so
l
genomics/sgn
commit
|
commitdiff
|
tree
2010-05-16
Naama Mend
a
fixed a missing </td>
tag
commit
|
commitdiff
|
tree
2010-05-16
N
a
ama Menda
chromosom
e
glyp
h
s should be
p
rinted in a nested table
.
.
.
commit
|
commitdiff
|
tree
2010-05-14
Naam
a
Menda
Merge bran
c
h 'mas
t
er
'
of github
.
c
o
m:solgenomics/sgn
commit
|
commitdiff
|
tree
2010-05-14
Naama Men
d
a
s
o
l100 pag
e
masoniz
e
d
commit
|
commitdiff
|
tree
2010-05-12
Naama Menda
a
dded
an
anchor
tag for eac
h
t
r
ee u
s
ing th
e
r
oot name
commit
|
commitdiff
|
tree
2010-04-26
N
aama Mend
a
fices a bug i
n
checking fo
r
existing organism with
.
.
.
commit
|
commitdiff
|
tree
2010-04-23
Naa
m
a
Menda
fixed typo
in arg na
m
e
r
e
fer
i
ng_page
commit
|
commitdiff
|
tree
2010-04-23
Naama
Menda
fixed
t
ypo in arg name
r
efe
r
ing_page
commit
|
commitdiff
|
tree
2010-04-22
N
a
ama Men
d
a
ad
d
e
d
l
i
nks to th
e
tree
b
r
o
wser using a n
e
wick strin
g
.
.
.
commit
|
commitdiff
|
tree
2010-04-22
Naama M
e
nda
buil
d
_ttre
e
funct
i
on now
r
eturns a newick string
.
Uesful
.
.
.
commit
|
commitdiff
|
tree
2010-04-22
Naama Menda
u
sing in
f
o_sect
i
on
.
mas for ea
c
h organn
i
s
m t
r
ee
commit
|
commitdiff
|
tree
2010-04-22
N
a
ama Menda
removed
h
ardcoding of tempdir
commit
|
commitdiff
|
tree
2010-04-21
N
a
ama Menda
maso
n
component for ha
n
dling sgn_da
t
a
.
p
l html
c
o
d
e
.
.
.
commit
|
commitdiff
|
tree
2010-04-21
Naama Mend
a
moved html
code to mason, moved fun
c
tion for building
.
.
.
commit
|
commitdiff
|
tree
2010-04-21
N
aama
M
enda
remov
e
d unused
s
tuff
commit
|
commitdiff
|
tree
2010-04-21
Naama
Menda
fix
e
d size of
organism trees
commit
|
commitdiff
|
tree
2010-04-21
Naama Menda
fixed a bu
g
in recent annota
t
i
o
n
s list
commit
|
commitdiff
|
tree
2010-04-20
Naama Menda
a
dded
ht
m
l anch
o
rs
commit
|
commitdiff
|
tree
2010-04-20
Na
a
ma Menda
deleted functions
that
m
oved
t
o O
r
ga
n
ismTree modu
l
e
commit
|
commitdiff
|
tree
2010-04-20
Naam
a
Menda
deleted
f
u
n
c
t
i
ons that have moved to
C
XGN::Phylo
:
:OrganismTree
commit
|
commitdiff
|
tree
2010-04-20
Naama M
e
nda
moved fun
c
tions for
h
andli
n
g
org
a
n
i
sm t
r
ee nodes to
.
.
.
commit
|
commitdiff
|
tree
2010-04-19
Naama Menda
represent
i
ng w
e
b_visible organis
m
s
in a tr
e
e f
o
rmat
commit
|
commitdiff
|
tree
2010-04-14
Naa
m
a Menda
chang
e
d
d
atabase acreditation
f
o
r
p
henotyped accessions
commit
|
commitdiff
|
tree
2010-04-12
Naama Menda
printing
labels fo
r
a
ll nodes in the sp
e
cies tree
commit
|
commitdiff
|
tree
2010-04-09
Na
a
ma Me
n
d
a
c
a
lling 'gen
e
r
a
te
_
newick' with an option to print
.
.
.
commit
|
commitdiff
|
tree
2010-04-07
Naa
m
a Menda
printing organism tree with the co
r
rect image map
commit
|
commitdiff
|
tree
2010-04-06
N
a
ama
M
enda
managed to print
a
tree
image
commit
|
commitdiff
|
tree
2010-04-06
Naama Menda
fixed tempf
i
l
e
default from
CLEANUP=>0 (used
for dir
e
ctori
e
s
.
.
.
commit
|
commitdiff
|
tree
2010-04-05
N
a
ama Men
d
a
t
ryin
g
to p
r
int a phy
l
o tree
i
mage
commit
|
commitdiff
|
tree
2010-04-05
Naama M
e
nda
quoting f
i
le name s
h
ould w
o
r
k
for command 'iden
t
i
f
y
.
.
.
commit
|
commitdiff
|
tree
2010-03-26
Naama Menda
ch
a
n
g
e
d
response del
i
miter from '%' to '*' since
w
e
.
.
.
commit
|
commitdiff
|
tree
2010-03-25
N
a
ama Menda
removed unneces
s
a
ry schema a
r
g, and ST
D
ERR statement
commit
|
commitdiff
|
tree
2010-03-25
Naama Mend
a
bugfixes to
i
mag
e
load
i
ng scrip
t
commit
|
commitdiff
|
tree
2010-03-25
Naam
a
Menda
replaced VHost with SGN::Context
.
N
e
e
d to change to
commit
|
commitdiff
|
tree
2010-03-23
N
a
a
m
a Menda
fixed bug
w
i
th
locus editor privileges, and
s
up
p
r
e
s
sed
.
.
.
commit
|
commitdiff
|
tree
2010-03-18
Na
a
ma
M
enda
a draft for a so
l
100 s
e
quecing project ov
e
rv
i
ew
commit
|
commitdiff
|
tree
2010-03-16
N
a
ama Me
n
da
fixe
d
storing sp_person_id
f
or new
i
mage
s
.
S
t
i
ll need
.
.
.
commit
|
commitdiff
|
tree
2010-03-16
N
aama Menda
fixed typo
i
n 'r
e
f
erring_page'
commit
|
commitdiff
|
tree
2010-03-16
Na
a
ma Menda
fixed typo in 'referrin
g
_page'
commit
|
commitdiff
|
tree
2010-03-15
N
a
ama Menda
reverted
b
ack to using
l
ocus_id
4
28
f
o
r
c
hecking html
.
.
.
commit
|
commitdiff
|
tree
2010-03-15
N
aama M
e
nda
using HTML::Entities for encoding s
p
ecial c
h
aracters
.
.
.
commit
|
commitdiff
|
tree
2010-03-12
N
a
a
ma
Menda
fixed erro
r
page printing for obsolete
a
nd non-existing
.
.
.
commit
|
commitdiff
|
tree
2010-03-12
Naam
a
Menda
f
ixed brok
e
n link
commit
|
commitdiff
|
tree
2010-03-11
N
a
ama Menda
b
ugfix for
m
e
rge locu
s
f
unc
t
io
n
commit
|
commitdiff
|
tree
2010-03-11
Na
a
ma Menda
lo
c
us fo
r
m serve
r
side
scr
i
pt
i
s a
Aja
x
FormPage subclass
commit
|
commitdiff
|
tree
2010-03-11
Naama Menda
locu
s
_display
.
pl
i
s not a SimpleFormPage anym
o
r
e
commit
|
commitdiff
|
tree
2010-03-11
Naama M
e
nda
moved some ajax form pag
e
f
u
nctions to pare
n
t cla
s
s
commit
|
commitdiff
|
tree
2010-03-04
Naama
M
e
n
d
a
adi
n
g a se
r
ver sid
e
s
cript that
s
ubclasses A
j
a
x
F
ormPa
g
e
.
.
.
commit
|
commitdiff
|
tree
2010-03-04
Naama Men
d
a
imple
m
enti
n
g
a
n Aja
x
form framework
commit
|
commitdiff
|
tree
2010-03-02
Naama M
e
nda
cha
n
ged to ano
t
h
er l
o
cus in the
va
l
i
d
ate html script
.
.
.
commit
|
commitdiff
|
tree
2010-03-02
Naama
M
en
d
a
fixed missing </
t
d
>
t
a
g
.
Thank you
validate_
a
ll
.
t!
.
.
.
commit
|
commitdiff
|
tree
2010-02-04
Naa
m
a Menda
f
i
xed the
t
e
s
t for g
e
n
e
r
ic_gene_pa
g
e
.
pl
.
Pa
g
e does
.
.
.
commit
|
commitdiff
|
tree