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Squash a warning in the Cview controller
2011-05-05
Jona
t
h
a
n
"Duke"
.
.
.
Squ
a
sh a warning
i
n the Cview controller
commit
|
commitdiff
|
tree
2011-05-05
Jon
a
than
"
D
uke"
.
.
.
Squash a wa
r
ni
n
g
commit
|
commitdiff
|
tree
2011-05-04
J
onathan "Duke"
.
.
.
Crush s
o
me
w
arnings
commit
|
commitdiff
|
tree
2011-05-04
J
ona
t
han "Du
k
e
"
.
.
.
Squash
w
arni
n
gs
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Duke"
.
.
.
Make align_viewer
.
t
test
s
use
S
GN::Test::WWW::Mechanize
commit
|
commitdiff
|
tree
2011-05-04
Jonath
a
n "Duke"
.
.
.
M
a
k
e
SGN::Test:
:
Data q
u
ieter by defa
u
lt
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "
D
uke"
.
.
.
F
ix Conten
t
-dispo
s
ition te
s
t for SGN::C
o
n
t
roller::Download
commit
|
commitdiff
|
tree
2011-05-03
Jo
n
athan "Duke"
.
.
.
f
ix ty
p
o in sg
n
.
c
onf
commit
|
commitdiff
|
tree
2011-05-03
Jonatha
n
"Duk
e
"
.
.
.
Groom
forma
t
tinghe
l
per
s
.
t a
b
it
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "D
u
ke"
.
.
.
Preven
t
some
u
niniti
a
l
i
zed
value warnings
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "Duk
e
"
.
.
.
Make t/01a
p
p
.
t use
Test::Most (trigger jitte
r
bug)
commit
|
commitdiff
|
tree
2011-04-26
J
o
n
a
t
h
an "Duke"
.
.
.
Tid
y
up
a sc
r
ipt
t
o
tempt the Jitterbug gods
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "Duke
"
.
.
.
Y
et an
o
ther triv
i
al change to
t
rigger Jitt
e
rbug
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "Duke"
.
.
.
Ignore a file
w
hich i
s
generated by newer Mod
u
le::B
u
ild's
commit
|
commitdiff
|
tree
2011-04-26
J
onath
a
n
"
Duke"
.
.
.
Triv
i
al
c
hange
to
B
uild
.
PL to t
r
igg
e
r jitte
r
bug
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "Du
k
e"
.
.
.
Merge branch
'
m
aster' into topic/secretom
commit
|
commitdiff
|
tree
2011-04-22
Jonathan
"
Duke"
.
.
.
Rem
o
ve the mini
f
ie
d
c
o
lorbox and rese
t
colorbox
.
js
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Jonathan "Duke"
.
.
.
Prope
r
ly squash redefinition
w
ar
n
ings
commit
|
commitdiff
|
tree
2011-04-21
Jona
t
han "Duke"
.
.
.
Warni
n
g squash in
i
nfo_se
c
t
i
on
.
mas
commit
|
commitdiff
|
tree
2011-04-15
Jonath
a
n
"Duke"
.
.
.
Merge branch
'
topic/tmpred
p
l'
commit
|
commitdiff
|
tree
2011-03-24
Jonathan "Duke"
.
.
.
Merge remot
e
-
tracki
n
g b
r
anch
'
o
rigin/topic/
s
to
c
k_search'
commit
|
commitdiff
|
tree
2011-03-24
Jonat
h
an "D
u
ke"
.
.
.
Merge re
m
ote
-
t
r
acki
n
g branch 'origin/topi
c
/sto
c
k_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-24
Jonathan
"Duke"
.
.
.
Use unminified
t
he jquery, be
c
au
s
e
it will
b
e m
i
nified
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonathan
"
Duke
"
.
.
.
Remove a useles
s
use of catfile,
r
buels++
commit
|
commitdiff
|
tree
2011-03-23
Jon
a
tha
n
"Duke"
.
.
.
Make sto
c
k
se
a
rch wo
r
k pr
o
perly from direct_search
.
pl
commit
|
commitdiff
|
tree
2011-03-23
Jon
a
t
h
an
"
Duke"
.
.
.
M
erge remote-tracking branch 'orig
i
n/top
i
c/stock_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonathan "D
u
ke"
.
.
.
Store the
s
tock search form
in an external Y
A
ML fil
e
commit
|
commitdiff
|
tree
2011-03-23
J
onath
a
n "Duke"
.
.
.
container_attribu
t
e
s is n
o
t a
valid For
m
Fu attribute
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonathan "Duke"
.
.
.
Merge re
m
ote-tracking branch 'origin/topic/st
o
ck_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Jon
a
than "Duke"
.
.
.
w
i
p
commit
|
commitdiff
|
tree
2011-03-17
Jo
n
athan "Duke"
.
.
.
Add
a
stub fo
r
updating the trait
r
ange when the tr
a
it
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
J
o
natha
n
"Duke"
.
.
.
Add a div that can be populated with
t
h
e
valid tra
i
t
.
.
.
commit
|
commitdiff
|
tree
2011-03-16
Jonathan "Duke
"
.
.
.
Fix stock
s
e
arch
p
agina
t
io
n
links
a
n
d
refact
o
r contro
l
l
e
r
commit
|
commitdiff
|
tree
2011-03-16
Jonathan
"Duke"
.
.
.
R
e
factor stock
c
ontroll
e
r
.
No functional chan
g
es
commit
|
commitdiff
|
tree
2011-03-15
Jonathan "Du
k
e"
.
.
.
Show the advanced options i
n
stoc
k
search results if
.
.
.
commit
|
commitdiff
|
tree
2011-03-14
J
o
nathan "
D
u
k
e"
.
.
.
Update the 'Abou
t
SG
N
' blurb
t
o
be
more inclusive to
.
.
.
commit
|
commitdiff
|
tree
2011-03-15
Jonat
h
an
"
Duke"
.
.
.
Fix
s
yntax error in or
g
anis
m
con
t
roll
e
r
t
e
st
commit
|
commitdiff
|
tree
2011-03-11
Jon
a
t
h
an "Duke"
.
.
.
Mak
e
the advanced checkbox on
s
tock search finally
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Jonathan "D
u
ke"
.
.
.
U
s
e the barely-documented
c
ontainer_attribute
s
in FormFu
commit
|
commitdiff
|
tree
2011-03-10
Jonat
h
an
"
Duke"
.
.
.
Tell FormFu to add C
S
S
classes to certain a
d
vance
d
.
.
.
commit
|
commitdiff
|
tree
2011-03-02
Naam
a
Mend
a
added printing phenotype data
commit
|
commitdiff
|
tree
2011-03-02
N
aama Menda
com
p
onent for display
i
ng phenot
y
pe data
commit
|
commitdiff
|
tree
2011-02-28
Jonathan "Du
k
e
"
.
.
.
perltidy
on assing_owner
.
p
l
commit
|
commitdiff
|
tree
2011-02-28
Jonat
h
an "Duke"
.
.
.
Clean up cruft in assign
_
own
e
r
.
pl
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Menda
fixed search by e
d
itor
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
R
evert "
a
dde
d
undef option to allele mode of
i
nheritance"
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
no need
f
or p
e
rson objec
t
in the
l
ocus ajax test, since
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama
Menda
t
e
sting
if the allele section
i
s printed co
r
rect
l
y
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
t
e
st for
stock ajax associate_locus functi
o
n
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
invali
d
stock or allele
id error is n
o
w sent for the
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Men
d
a
test for pe
o
p
le
ajax controller
commit
|
commitdiff
|
tree
2011-02-28
Na
a
ma Men
d
a
test for l
o
cus ajax c
o
n
t
roller
commit
|
commitdiff
|
tree
2011-02-28
Robert Bu
e
l
s
add
a
f
o
rm-
s
ubmi
t
ted var to baby
W
WW::Mechanize tests
commit
|
commitdiff
|
tree
2011-02-28
Robert Bu
e
ls
r
emove tab chars from sto
c
k search
.
mas
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Me
n
da
tr
y
i
n
g to get te
h
s
t
ock_s
e
arc
h
_
f
orm to su
b
mit in the
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Mend
a
trying to f
i
x
t
he stock search test
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a Menda
tes
t
i
n
g
s
earch
s
tock by
e
d
itor
commit
|
commitdiff
|
tree
2011-02-28
Naama Mend
a
added something
t
o
stoc
k
prop_GET
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
added check i
f
user is logged
i
n with the correct privileges
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
type_id was ambiguous
.
e
x
ists in
stock and stockprop
.
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a Menda
added search stock by edito
r
+
a
utocompletion
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Men
d
a
wrote form
.
mas paramet
e
rs more readable
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
fixed
l
ink fo
r
s
u
bmitti
n
g new stock,
a
n
d ad
d
ed optio
n
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Na
a
ma Menda
fixed
link
to stock page
commit
|
commitdiff
|
tree
2011-02-28
Naama
M
enda
added search stock
by editor
nam
e
,
st
o
ck object and
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
n
da
do
not print alle
l
e
t
able headers if no alleles are
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
a
ama
M
enda
fixed
s
tock link to current ur
l
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a Menda
added an AJA
X
REST
controller for sg
n
people
.
C
u
r
r
ently
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
moved alle
l
e
s
ection
t
o a javascr
i
pt div
commit
|
commitdiff
|
tree
2011-02-28
Naama
Men
d
a
checkin
g
user pr
i
vileges before
cre
a
t
i
ng new stockprop
commit
|
commitdiff
|
tree
2011-02-28
N
aama
M
enda
fixing
t
he a
s
soci
a
te
l
ocus
f
unctional
i
ty on t
h
e stock
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
aama Men
d
a
doc
u
m
e
ntation
f
or
javascr
i
pt
form ob
j
e
ct
commit
|
commitdiff
|
tree
2011-02-28
Naama
M
enda
loading script for so
l
cap s
n
p
g
e
notypes
commit
|
commitdiff
|
tree
2011-02-28
Naama Mend
a
added link
to stock owners
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
added function for
a
ss
o
ciating loci
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
added f
o
rm for bro
w
sing l
o
ci to
b
e
a
ss
o
c
iated wi
t
h
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nd
a
removed some perl code from allele component
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
add_pu
b
lication
w
orks now for stock
s
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
db patch fo
r
moving the st
o
ck public
a
tions
t
o the right
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Menda
added a linke
d
l
oci section
.
Need t
o
ad
d
th
e
js
fo
r
m
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
aama Menda
p
rinting some
stock proper
t
ies
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Me
n
da
added more inf
o
+
synony
m
list to the stock page
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
m
o
ved
the p
h
enotype search tab t
o
p
oin
t
to new
s
tock
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
a
a
m
a Mend
a
mov
e
d the s
t
ock search for
m
to
a
ma
s
on com
p
onent
commit
|
commitdiff
|
tree
2011-02-04
Jonathan "
D
uk
e
"
.
.
.
Mode
r
nize and uncrufti
f
y
the cv
i
ew i
n
dex
.
mas a bit
commit
|
commitdiff
|
tree
2011-02-04
Jonathan "Duke"
.
.
.
Add some klingon s
e
ns
i
bility to Se
c
retom code and cl
e
an
.
.
.
commit
|
commitdiff
|
tree
2011-02-04
Jonathan "D
u
ke"
.
.
.
Remo
v
e cr
u
f
t
from cv
i
ew index
.
pl
commit
|
commitdiff
|
tree
2011-02-04
J
onathan "D
u
k
e"
.
.
.
Refactor Or
g
anism
c
o
n
t
roller t
e
sts
a bit
commit
|
commitdiff
|
tree
2011-02-04
Jonathan "Duke"
.
.
.
Properly skip ITAG
r
elease t
e
s
t
s wh
e
n
required
data
.
.
.
commit
|
commitdiff
|
tree
2011-02-04
Jona
t
han "Duke"
.
.
.
A
d
d t/data to
.
git
i
gnore
commit
|
commitdiff
|
tree
2011-02-04
Jonathan
"
Duke"
.
.
.
P
ro
p
erly wa
r
n th
e
exit code i
f
s
o
met
h
i
ng fails in SGN
.
.
.
commit
|
commitdiff
|
tree
2011-02-03
Jonathan "Duke"
.
.
.
Perltidy on t/phenome/qtl
.
t
commit
|
commitdiff
|
tree
2011-02-01
Jona
t
han "Duke"
.
.
.
Co
n
vert bulk tests to use
S
GN::
T
est::WW
W
::Mec
h
a
nize
commit
|
commitdiff
|
tree
2011-02-01
J
ona
t
h
a
n "Du
k
e"
.
.
.
Mak
e
SGN
:
:B
u
i
l
d rep
o
rt better er
r
ors when checking
.
.
.
commit
|
commitdiff
|
tree
2011-02-01
Jo
n
a
t
h
a
n "Duke"
.
.
.
Move S
G
N::View::Ema
i
l::Er
r
orE
m
ail tests
t
o a nicer
.
.
.
commit
|
commitdiff
|
tree
2011-02-01
Jonat
h
an "
D
uke"
.
.
.
Skip
s
om
e
QT
L
tests i
f
t
h
e
h
eatmap
i
s
not
p
r
e
s
e
nt,
.
.
.
commit
|
commitdiff
|
tree
2011-02-01
Jonathan "D
u
ke"
.
.
.
M
a
ke SGN::View:
:
Stock generate cvterm l
i
nks from cvterm
.
.
.
commit
|
commitdiff
|
tree
2011-01-31
J
o
n
athan "
D
u
k
e"
.
.
.
Skip s
o
me tests if member_se
a
rch_for
m
is not avai
l
ab
l
e
commit
|
commitdiff
|
tree
2011-01-31
Jona
t
han "Duke"
.
.
.
A
d
d so
m
e diag
n
ositcs
a
nd
a te
s
t for
SGN::
C
ontroller
.
.
.
commit
|
commitdiff
|
tree
2011-01-31
Jonat
h
an "D
u
k
e"
.
.
.
Skip s
o
me geno
m
i
c
clone tes
t
s if the rele
v
ant form
.
.
.
commit
|
commitdiff
|
tree
next