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Merge branch 'master' into topic/add_accession_seedlot_script
2024-03-04
Luka
s
Mueller
Me
r
ge branch 'master' into t
o
p
i
c/add_a
c
cession_seedlot
_
script
commit
|
commitdiff
|
tree
2024-02-29
L
uk
a
s Mueller
decl
a
re va
r
s
c
orrectly
.
commit
|
commitdiff
|
tree
2024-02-29
Luka
s
Muel
l
er
fix issues raise
d
by Ti
t
ima
.
Typ
e
h
a
s
n
o pl
a
ce in the
.
.
.
commit
|
commitdiff
|
tree
2024-02-17
Lukas Mueller
add a s
c
ript
t
o
dow
n
load accessions given s
e
edlot na
m
es
.
commit
|
commitdiff
|
tree
2024-02-15
L
u
k
as M
u
el
l
er
M
erge
b
ranch 'topic/add_brap
i
_logo' into topic/brapi
_
logo
commit
|
commitdiff
|
tree
2024-02-15
Lu
k
a
s
Mueller
Merg
e
branch 'mast
e
r
'
int
o
topic/
b
rap
i
_
l
ogo
commit
|
commitdiff
|
tree
2024-02-15
Lukas Mueller
add brapi logo
.
commit
|
commitdiff
|
tree
2024-02-05
Lukas M
u
e
ller
make it wo
r
k without a p
o
pulation name
.
commit
|
commitdiff
|
tree
2024-02-02
Luk
a
s Mueller
sort tri
a
l types alph
a
betic
a
lly
.
commit
|
commitdiff
|
tree
2024-01-27
Lukas M
u
eller
fi
x
issues raised by Titima
.
commit
|
commitdiff
|
tree
2024-01-25
Luka
s
Mueller
adding
the brapi log
o
to the footer
.
commit
|
commitdiff
|
tree
2024-01-24
Lukas Mueller
remove cross
.
t test, which
is
comp
l
etel
y
cover
e
d by
.
.
.
commit
|
commitdiff
|
tree
2024-01-24
Lu
k
as M
u
eller
call cl
e
an_up_d
b
after tests ar
e
ru
n
.
commit
|
commitdiff
|
tree
2024-01-24
L
ukas Mue
l
ler
add a
test for
t
he db stats
o
bject
.
commit
|
commitdiff
|
tree
2024-01-24
Lukas
M
uel
l
er
add a m
a
son
c
omponen
t
for t
h
e recent activity page
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas
Mueller
if include_d
a
teless_ite
m
is unde
f
, us
e
t
h
e default
.
.
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas Muell
e
r
remove STDERR messages
.
commit
|
commitdiff
|
tree
2024-01-23
Lu
k
as Mueller
remov
e
debug alert
.
commit
|
commitdiff
|
tree
2024-01-23
Luk
a
s Muel
l
er
fix parameter parsin
g
in AJAX; twe
a
k qu
e
ry
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas Mueller
f
ix
parsing of i
n
put parameters
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas Mue
l
ler
c
o
mment out lon
g
data dumps to STDERR
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas Mu
e
l
l
er
removing ac
t
iv
i
ty graph
a
g
ain a
s
it t
a
kes too lo
n
g
.
.
.
commit
|
commitdiff
|
tree
2024-01-23
L
u
kas Mueller
bring back
a
ctivity
g
raph
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas M
u
eller
fix mis
s
ing comme
n
t character
.
commit
|
commitdiff
|
tree
2024-01-23
Luka
s
Mue
l
ler
com
m
ent ou
t
larg
e
section of breeding program deta
i
ls
.
.
.
commit
|
commitdiff
|
tree
2024-01-23
Lukas Mue
l
ler
Me
r
ge bran
c
h 'master' into topic/updat
e
_load_genotyping
_
plat
.
.
.
commit
|
commitdiff
|
tree
2024-01-22
Luk
a
s Muel
l
er
remove activity grap
h
f
o
r no
w
(too s
l
ow)
.
commit
|
commitdiff
|
tree
2024-01-22
L
ukas Mu
e
l
ler
r
e
v
e
rt back
to the
mason in
f
o sections, as the new
.
.
.
commit
|
commitdiff
|
tree
2024-01-21
Luk
a
s Mueller
f
ix range picker in db st
a
ts page
.
commit
|
commitdiff
|
tree
2024-01-21
Lu
k
a
s
M
uelle
r
fix func
t
i
o
n
name
.
commit
|
commitdiff
|
tree
2024-01-21
Lukas
M
ueller
fix an i
s
su
e
with sta
r
t and end date set
t
ing
.
commit
|
commitdiff
|
tree
2024-01-21
Luk
a
s M
u
eller
tw
e
a
k tabl
e
s
.
commit
|
commitdiff
|
tree
2024-01-21
Lukas Mue
l
ler
r
emov
e
recen
t
ac
t
ivity
.
j
s fro
m
entri
e
s
.
commit
|
commitdiff
|
tree
2024-01-21
Lukas Mueller
im
p
lement a page t
h
at s
h
ows data
ena
b
l
e
d
d
b
usage stats
.
commit
|
commitdiff
|
tree
2024-01-20
Lukas M
u
eller
f
i
x conflict
.
commit
|
commitdiff
|
tree
2024-01-20
L
u
kas
M
ueller
factor out javas
c
ript from rece
n
t activity
p
age
.
commit
|
commitdiff
|
tree
2024-01-19
Lukas
M
u
e
l
ler
re
c
en
t
activity js code
.
commit
|
commitdiff
|
tree
2024-01-19
Lukas
M
u
e
ller
fix some
queries and add functions for a rece
n
t_activity
.
.
.
commit
|
commitdiff
|
tree
2024-01-19
Lukas Mueller
t
r
ying to get year range to disp
l
a
y correclty
.
commit
|
commitdiff
|
tree
2024-01-17
Lukas Mueller
chan
g
e
fo
o
ter
t
o sho
w
new bti logo
.
commit
|
commitdiff
|
tree
2024-01-17
Lu
k
as
M
u
eller
add new bti lo
g
o
.
commit
|
commitdiff
|
tree
2024-01-17
Lukas Mueller
add
date based
queries for
p
henot
y
pe download
.
commit
|
commitdiff
|
tree
2024-01-15
L
u
kas
M
ue
l
ler
refactor traits and trial dat
a
so
that it can b
e
updated
.
.
.
commit
|
commitdiff
|
tree
2024-01-12
L
ukas Muel
l
er
remove debug alert
.
commit
|
commitdiff
|
tree
2024-01-12
Luka
s
M
ueller
add time
que
r
y ui for dbstats
.
commit
|
commitdiff
|
tree
2024-01-10
L
u
kas
M
ueller
enable da
t
e
r
anges in the db stat
s
queri
e
s
.
commit
|
commitdiff
|
tree
2024-01-10
Lukas Mu
e
ller
a
d
apt POD to new and removed opt
i
ons
.
commit
|
commitdiff
|
tree
2024-01-10
Lukas Mu
e
l
ler
retrieve
i
n
f
orm
a
t
i
o
n from gen
o
typing
project
.
commit
|
commitdiff
|
tree
2024-01-10
Luka
s
Mueller
add an option, -r, to specficy the genotypi
n
g facility
.
.
.
commit
|
commitdiff
|
tree
2024-01-09
L
u
k
a
s Mu
e
ller
replace smile
y
fa
c
e wit
h
[
L
oading
.
.
.
]
commit
|
commitdiff
|
tree
2023-12-20
Lukas Mueller
remove wron
g
l
y commi
t
te
d
f
i
les
.
commit
|
commitdiff
|
tree
2023-12-15
Lu
k
as
M
ueller
add acce
s
s
c
ontrol
l
ers
.
commit
|
commitdiff
|
tree
2023-12-15
L
u
k
a
s
M
uelle
r
add genotyping
p
roj
e
ct option; fix POD
a
nd minor teaks
.
commit
|
commitdiff
|
tree
2023-12-14
Lukas Mueller
tweak POD fo
r
load_image
s
.
p
l
script
.
commit
|
commitdiff
|
tree
2023-12-14
Lukas Mue
l
ler
Merge branch '
m
aster' into
topic
/
loa
d
_
i
ma
g
es_
s
cript
commit
|
commitdiff
|
tree
2023-12-09
Lu
k
as M
u
eller
fix section
description by
r
e
moving wo
r
d dupli
c
a
tion
.
commit
|
commitdiff
|
tree
2023-12-09
Lu
k
a
s Muell
e
r
mov
e
p
ageSiz
e
argu
m
ent to prop
e
r location in vari
a
bl
e
s
.
.
.
commit
|
commitdiff
|
tree
2023-11-30
Lu
k
as Mueller
fix test by adding no_plan di
r
ective
.
commit
|
commitdiff
|
tree
2023-11-29
Lukas Mueller
Merge b
r
anch 'topic/fix-DiGG
e
r-trial-desig
n
' in
t
o to
p
i
c
.
.
.
commit
|
commitdiff
|
tree
2023-11-29
Luka
s
Mu
e
ller
load images script
.
commit
|
commitdiff
|
tree
2023-11-28
Lukas
M
u
eller
up
d
at
e
e
mpty fixture to something
t
hat is
m
ore up to
.
.
.
commit
|
commitdiff
|
tree
2023-11-28
Lukas M
u
eller
a
d
d l
a
rge pa
g
esiz
e
for
v
ariab
l
es ca
l
l
.
commit
|
commitdiff
|
tree
2023-11-27
Lukas Muel
l
er
Me
r
ge
br
a
n
ch
'
master' int
o
topic/show_non_nu
m
eric
_
t
r
aits
commit
|
commitdiff
|
tree
2023-11-26
Luk
a
s Mueller
remove debug alerts a
n
d add destroy: true to
datatabl
e
commit
|
commitdiff
|
tree
2023-11-26
L
u
kas
M
uelle
r
add raw da
t
a sec
t
i
on
.
commit
|
commitdiff
|
tree
2023-11-10
Lukas Mue
l
ler
Merge
b
ranch 'master' into topic/simsea
r
ch_ui
commit
|
commitdiff
|
tree
2023-10-30
Luk
a
s Mueller
add
i
ng sect
i
on f
o
r tri
a
l raw data
.
commit
|
commitdiff
|
tree
2023-10-27
Lukas M
u
eller
f
ix x-axis scale in GD plo
t
.
commit
|
commitdiff
|
tree
2023-10-27
L
uka
s
Mueller
add a raw data section
o
n the
t
r
i
a
l
detail p
a
ge
.
commit
|
commitdiff
|
tree
2023-10-27
Lukas Muell
e
r
add non-numeric
traits t
o
phen
o
type
r
esul
t
o
verview
.
.
.
commit
|
commitdiff
|
tree
2023-10-26
Luk
a
s M
u
eller
add a query fo
r
p
h
e
noty
p
e count per
trial
.
commit
|
commitdiff
|
tree
2023-10-19
Lukas
M
ueller
retrieve synon
y
ms usi
n
g
stoc
k
_synonym,
n
ot synonym
.
commit
|
commitdiff
|
tree
2023-10-19
Lukas Mu
e
l
l
er
add some standard prop headers to stock prop downloa
d
.
commit
|
commitdiff
|
tree
2023-10-19
Lukas Mueller
do not load empty string
v
alues
.
commit
|
commitdiff
|
tree
2023-10-11
Lukas Mueller
Mer
g
e bran
c
h 'master' into
t
o
pic/fix_
l
oad_tra
i
t_
p
rops_script
commit
|
commitdiff
|
tree
2023-10-11
Lu
k
a
s
Mueller
d
o
the dup
l
i
c
ate check in the
m
a
n
ual upload
.
commit
|
commitdiff
|
tree
2023-10-11
Luk
a
s
M
ueller
use CXGN:
:
C
v
term
.
commit
|
commitdiff
|
tree
2023-10-11
Lu
k
as Mueller
fix regular expression for a
c
cession part of cvterm
.
commit
|
commitdiff
|
tree
2023-10-10
Lukas
Mue
l
l
er
M
e
rge branch
'master'
i
nto topic/fix_load_tra
i
t_pr
o
ps_script
commit
|
commitdiff
|
tree
2023-10-10
Lu
k
as
M
ueller
f
i
x
ide
n
ts in
the load_tra
i
t_
p
rops
.
pl scr
i
pt to the
.
.
.
commit
|
commitdiff
|
tree
2023-10-10
Luk
a
s
M
ueller
check
for definedness of value so
that 0 also pass
e
s
.
.
.
commit
|
commitdiff
|
tree
2023-10-09
L
ukas M
u
eller
do the dupli
c
ate check in th
e
m
anual up
l
oad
.
commit
|
commitdiff
|
tree
2023-10-06
Lukas M
u
e
lle
r
add m
i
ssing variable
d
eclaration
.
commit
|
commitdiff
|
tree
2023-10-06
L
ukas Muel
l
er
a
dd missing v
a
riable declaration
.
commit
|
commitdiff
|
tree
2023-10-06
Lukas Mu
e
ller
add
pars
i
ng of optional
Cvter
m
acce
s
s
ion
commit
|
commitdiff
|
tree
2023-10-06
Lukas Muelle
r
add parsin
g
of
o
ptional Cvt
e
rm accession; add POD
.
commit
|
commitdiff
|
tree
2023-10-05
Lukas Mueller
tweak p
a
ge title for sims
e
a
r
ch
.
commit
|
commitdiff
|
tree
2023-09-28
Lukas Mueller
tweak g
r
aphics
.
commit
|
commitdiff
|
tree
2023-09-27
Luk
a
s
M
ueller
list onl
y
p
e
ople that have ce
n
s
o
r
=0 or dis
a
b
l
e is
.
.
.
commit
|
commitdiff
|
tree
2023-09-27
Lukas
M
ueller
add histogram and other
de
t
ails
.
commit
|
commitdiff
|
tree
2023-09-25
L
u
kas Mueller
c
han
g
e dock
e
r
for test
i
ng t
o
"latest"
commit
|
commitdiff
|
tree
2023-09-18
Lukas Mueller
fix
b
l
a
s
t po
d
.
commit
|
commitdiff
|
tree
2023-09-15
Lukas Mueller
f
i
x
the extension
for t
h
e new(e
r
) version of BLA
S
T
.
commit
|
commitdiff
|
tree
2023-09-06
Lukas
M
ueller
fix b
r
ap
i
phenotyping test
.
commit
|
commitdiff
|
tree
2023-09-06
Lukas Mueller
Merge
branch 'master
'
into top
i
c/update_cxgn_fi
x
ture
_
2023_06_3
0
commit
|
commitdiff
|
tree
2023-08-07
L
u
k
a
s Mueller
Merg
e
branch
'
m
aster' into topic/
u
pdate_cxgn_f
i
xtur
e
_
2023_06_
3
0
commit
|
commitdiff
|
tree
2023-08-07
Lu
k
as Mueller
up
d
at
e
breedbase to versi
o
n
v0
.
8
0
i
n t
h
e test
.
yml f
i
le
.
commit
|
commitdiff
|
tree
2023-08-04
Luk
a
s Mue
l
l
er
M
erge branch 'mas
t
er
'
into topic/update_cxgn_fixt
u
re_2023_06_30
commit
|
commitdiff
|
tree
2023-07-18
Luk
a
s Mue
l
ler
add a script to po
p
u
l
ate the blast
tabl
e
s
.
commit
|
commitdiff
|
tree
2023-07-09
Luk
a
s Muel
l
e
r
i
n
te
g
rate new scri
p
ts into simsearch, part 2
.
commit
|
commitdiff
|
tree
next