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Modernize CXGN::Search::CannedForms::MarkerSearch
2011-06-01
Jona
t
han "Duke"
.
.
.
Modernize CXG
N
::Search::CannedForms::MarkerSearch
commit
|
commitdiff
|
tree
2011-06-01
Jonathan "D
u
ke"
.
.
.
Ge
t
r
i
d of some deps
t
hat
will
g
o
a
w
ay so
o
n
commit
|
commitdiff
|
tree
2011-06-01
J
onat
h
an "Duke"
.
.
.
Modernize Canne
d
For
m
s an
d
don't use G
l
obal
C
on
t
ex
t
in
.
.
.
commit
|
commitdiff
|
tree
2011-06-01
Jonath
a
n "Duke"
.
.
.
follo
w
r
bue
l
s++ advice an
d
do a 301
r
e
d
i
r
e
c
t
at the
.
.
.
commit
|
commitdiff
|
tree
2011-06-01
Jonath
a
n "Duke"
.
.
.
Add the
l
ega
c
y p
a
t
h
o
f dire
c
t_search
to the new controller
commit
|
commitdiff
|
tree
2011-06-01
Jonathan
"Duke"
.
.
.
Merge remo
t
e-tr
a
cking branch 'origi
n
/topic/organism
_
search
.
.
.
commit
|
commitdiff
|
tree
2011-06-01
Jonathan "Duke"
.
.
.
Add a skel
e
ton
dir
e
ct sear
c
h catalyst
c
ontroll
e
r
commit
|
commitdiff
|
tree
2011-05-25
Jonathan "Duke"
.
.
.
Merge branch 'topic/secre
t
om'
commit
|
commitdiff
|
tree
2011-05-25
J
on
a
than "Duk
e
"
.
.
.
M
erge branch
'mas
t
er' into to
p
i
c
/secr
e
tom
commit
|
commitdiff
|
tree
2011-05-11
Jonatha
n
"
D
u
ke
"
.
.
.
Convert ajax organism contro
l
l
er integrat
i
on tests
.
.
.
commit
|
commitdiff
|
tree
2011-05-11
Jonath
a
n "Duke"
.
.
.
Move an example selenium test
t
o the prop
e
r
h
o
me
commit
|
commitdiff
|
tree
2011-05-06
Jon
a
than "Duke"
.
.
.
Make
more
cvterm
a
jax i
n
tegra
t
ion tests fail
m
ore
gracef
u
lly
.
.
.
commit
|
commitdiff
|
tree
2011-05-06
Jonath
a
n "Duke"
.
.
.
Make cvterm ajax integr
a
ti
o
n tests fail more
g
racefully
.
.
.
commit
|
commitdiff
|
tree
2011-05-06
Jonathan
"
Duke"
.
.
.
Re
v
ert "fix test_all
.
p
l hanging if server
f
ails to
.
.
.
commit
|
commitdiff
|
tree
2011-05-06
Jonathan
"
Duke
"
.
.
.
Revert "clea
n
u
p ser
v
er
p
r
ocess if it di
e
s"
commit
|
commitdiff
|
tree
2011-05-06
Jona
t
han "Duke"
.
.
.
perlti
d
y bios
o
u
rce validation tests
commit
|
commitdiff
|
tree
2011-05-06
Jonat
h
an "Duke"
.
.
.
Don'
t
use
SGN_TEST_SERVER i
n
t
h
e biosource validation
.
.
.
commit
|
commitdiff
|
tree
2011-05-06
Ro
b
ert Bu
e
l
s
clean
u
p
server proce
s
s
i
f
i
t
dies
commit
|
commitdiff
|
tree
2011-05-06
Robert Buels
fix test_all
.
pl hanging if server fa
i
ls to
s
tart
commit
|
commitdiff
|
tree
2011-05-06
J
o
natha
n
"
D
uke"
.
.
.
Moderniz
e
the b
l
ast
i
ndex
.
pl
commit
|
commitdiff
|
tree
2011-05-05
Jonathan
"
Duke"
.
.
.
Add some use
f
ul warnings t
o
t/test_all
.
pl to debug
.
.
.
commit
|
commitdiff
|
tree
2011-05-05
Jonathan
"
D
uke"
.
.
.
Squash a war
n
i
n
g
in the Cview
c
on
t
r
o
lle
r
commit
|
commitdiff
|
tree
2011-05-05
Jona
t
h
a
n "D
u
k
e
"
.
.
.
Sq
u
a
s
h
a warning
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Duke"
.
.
.
Crush some w
a
r
n
ings
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Duke"
.
.
.
Squash warnings
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Duke"
.
.
.
Make align_viewer
.
t tests use SGN::Test::WWW::Mechanize
commit
|
commitdiff
|
tree
2011-05-04
Jonathan "Du
k
e"
.
.
.
Ma
k
e SGN::Test::Da
t
a qui
e
ter by def
a
ult
commit
|
commitdiff
|
tree
2011-05-03
J
onathan "Du
k
e"
.
.
.
Fix C
o
ntent-dis
p
osition test fo
r
SGN::Controlle
r
:
:
Downlo
a
d
commit
|
commitdiff
|
tree
2011-05-03
Jonathan
"Duke"
.
.
.
fix typo in
sgn
.
conf
commit
|
commitdiff
|
tree
2011-05-03
Jonath
a
n "
D
u
ke"
.
.
.
Gro
o
m formattinghelp
e
rs
.
t a bit
commit
|
commitdiff
|
tree
2011-05-03
Jonathan "Duke"
.
.
.
Prevent some un
i
n
i
t
i
alized valu
e
warnings
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "
D
uke
"
.
.
.
Make t
/
0
1
app
.
t use Test::Most (trigger jit
t
erbug)
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "Duke"
.
.
.
Tidy up
a
scri
p
t
t
o
tem
p
t the Jitt
e
rbug
g
ods
commit
|
commitdiff
|
tree
2011-04-26
Jonathan "D
u
ke"
.
.
.
Yet another t
r
ivial change
to
t
r
igger
J
i
tterbug
commit
|
commitdiff
|
tree
2011-04-26
Jonathan
"
Duke
"
.
.
.
Ignor
e
a file whic
h
is generated by new
e
r Mo
d
u
le::Build's
commit
|
commitdiff
|
tree
2011-04-26
J
o
nathan "Du
k
e"
.
.
.
T
rivial change to Build
.
PL to trigger ji
t
terbug
commit
|
commitdiff
|
tree
2011-04-26
J
onat
h
an "Duke"
.
.
.
Merge
b
r
a
n
c
h 'mas
t
e
r
' into topic
/
secretom
commit
|
commitdiff
|
tree
2011-04-22
Jonathan "Duke"
.
.
.
Remo
v
e the minified c
o
lorbox and
r
e
set colorbox
.
js
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Jonathan "Duke"
.
.
.
P
roperly squ
a
sh
r
e
d
e
finition warning
s
commit
|
commitdiff
|
tree
2011-04-21
Jonathan "Duke"
.
.
.
Warning squash in
i
nfo_section
.
m
as
commit
|
commitdiff
|
tree
2011-04-15
Jon
a
t
h
an "Duke"
.
.
.
Merge bra
n
c
h '
t
opic/tmpredpl'
commit
|
commitdiff
|
tree
2011-03-24
Jona
t
han
"Duke"
.
.
.
Merge remote-tracking branch 'o
r
ig
i
n/topic/stock_search'
commit
|
commitdiff
|
tree
2011-03-24
Jonatha
n
"Duke"
.
.
.
M
erg
e
remote-tracking branch 'origin/t
o
pic/sto
c
k_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-24
J
on
a
than
"D
u
ke"
.
.
.
Use unminified the jquer
y
,
because it will be mini
f
ied
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonathan
"Duke"
.
.
.
R
emove a
u
sel
e
ss use of
catfile, rbuels+
+
commit
|
commitdiff
|
tree
2011-03-23
J
onatha
n
"Duke"
.
.
.
Make stock search work p
r
operly from direct_search
.
p
l
commit
|
commitdiff
|
tree
2011-03-23
Jon
a
t
h
a
n "Duke
"
.
.
.
Me
r
ge remo
t
e-tra
c
king branch '
o
rigin/topic/stock_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonath
a
n "Duke"
.
.
.
Store the stock se
a
rch form in an exter
n
al
Y
AML
f
i
le
commit
|
commitdiff
|
tree
2011-03-23
Jonathan "Duke"
.
.
.
co
n
tainer
_
at
t
ributes is not
a valid For
m
Fu
attrib
u
t
e
.
.
.
commit
|
commitdiff
|
tree
2011-03-23
Jonathan
"Du
k
e"
.
.
.
Merge re
m
o
t
e-track
i
ng branc
h
'origin
/
topic/stock_search
.
.
.
commit
|
commitdiff
|
tree
2011-03-22
Jon
a
than "D
u
ke"
.
.
.
wip
commit
|
commitdiff
|
tree
2011-03-17
J
o
nathan "Du
k
e"
.
.
.
Add a
s
t
u
b fo
r
up
d
ating the trai
t
range
when the
tra
i
t
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
J
o
nathan
"Duke"
.
.
.
Add
a
div th
a
t ca
n
be
p
opul
a
ted wi
t
h the valid
trait
.
.
.
commit
|
commitdiff
|
tree
2011-03-16
Jonathan "
D
u
k
e
"
.
.
.
Fix stock sea
r
ch pagination lin
k
s and
refactor control
l
er
commit
|
commitdiff
|
tree
2011-03-16
Jonathan "Duke"
.
.
.
Refactor
s
tock controll
e
r
.
N
o
f
u
nctional changes
commit
|
commitdiff
|
tree
2011-03-15
Jon
a
than
"
Duke"
.
.
.
S
how the advan
c
ed o
p
tion
s
i
n
stoc
k
s
earch results i
f
.
.
.
commit
|
commitdiff
|
tree
2011-03-14
Jon
a
than "Duke"
.
.
.
Update the
'
About SGN'
b
lurb to be
m
o
re inc
l
usive to
.
.
.
commit
|
commitdiff
|
tree
2011-03-15
Jonatha
n
"Duke"
.
.
.
Fix syntax error
i
n
organism controlle
r
test
commit
|
commitdiff
|
tree
2011-03-11
Jonath
a
n
"Duke"
.
.
.
Make the advanced ch
e
ckbox o
n
stock sea
r
c
h finally
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Jona
t
h
a
n
"Du
k
e"
.
.
.
Use t
h
e barely-do
c
umented
cont
a
iner_attr
i
butes in Fo
r
mFu
commit
|
commitdiff
|
tree
2011-03-10
Jonathan "
D
uk
e
"
.
.
.
Tell For
m
Fu to add
C
SS classes to certai
n
ad
v
anced
.
.
.
commit
|
commitdiff
|
tree
2011-03-02
Naam
a
Menda
a
d
d
ed
p
r
i
nti
n
g
p
h
en
o
t
ype d
a
ta
commit
|
commitdiff
|
tree
2011-03-02
Naa
m
a
Menda
component for d
i
spla
y
ing pheno
t
y
p
e data
commit
|
commitdiff
|
tree
2011-02-28
Jonathan "Duke"
.
.
.
perltidy on
a
s
s
ing_owner
.
p
l
commit
|
commitdiff
|
tree
2011-02-28
Jonathan "D
u
ke"
.
.
.
C
l
ean up c
r
uft in ass
i
gn_owner
.
pl
commit
|
commitdiff
|
tree
2011-02-28
N
a
ama Menda
fixed
se
a
rch by editor
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a
M
e
nda
Revert "added undef
op
t
ion to allele mode of inh
e
ritance"
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
no need fo
r
person object in
the
locus
ajax tes
t
, sinc
e
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
a
ama
M
enda
t
e
sting i
f
the allele sectio
n
is pr
i
n
ted c
o
rrectly
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
N
aa
m
a Menda
test for stock
a
jax associate_locus fu
n
ction
commit
|
commitdiff
|
tree
2011-02-28
Naama
Me
n
d
a
invalid s
t
ock or a
l
l
ele id err
o
r i
s
now se
n
t
f
or
t
he
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a Menda
t
est for people ajax
c
o
ntrolle
r
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
tes
t
f
or loc
u
s ajax contr
o
l
l
er
commit
|
commitdiff
|
tree
2011-02-28
R
ober
t
Buels
add a form-s
u
bm
i
tted
v
ar to baby W
W
W::
M
echan
i
z
e
tests
commit
|
commitdiff
|
tree
2011-02-28
Robert
B
uels
remove
t
ab chars from stock search
.
mas
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
tr
y
in
g
to get t
e
h stock_
s
e
arch
_
form to submit in t
h
e
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
tryi
n
g
to
f
ix the
stock s
e
a
r
ch test
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
te
s
t
ing search
s
tock by editor
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
adde
d
s
o
mething to stockprop_GE
T
commit
|
commitdiff
|
tree
2011-02-28
N
a
am
a
Menda
ad
d
ed check if user is logged in with the correc
t
privileges
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
type_id
w
a
s ambiguous
.
e
xists
i
n
stock and s
t
ockprop
.
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
added s
e
arch stock by editor + autocomple
t
ion
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
w
rote
f
o
rm
.
m
a
s
p
arameters mor
e
readable
commit
|
commitdiff
|
tree
2011-02-28
Naama Men
d
a
fixe
d
lin
k
for submitting new stoc
k
, and added option
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama
Menda
fi
x
ed link
t
o
s
tock page
commit
|
commitdiff
|
tree
2011-02-28
Naama Men
d
a
a
d
ded search stock
by edi
t
or
n
ame, stock
o
bject and
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Menda
do not prin
t
allele tabl
e
head
e
rs if no
a
lleles are
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
fixed s
t
ock link to
c
urrent url
commit
|
commitdiff
|
tree
2011-02-28
Naama M
e
nda
add
e
d an AJAX REST contr
o
lle
r
f
or s
g
n people
.
Currently
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama
Mend
a
moved all
e
le sect
i
on to a javascript div
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
checkin
g
user
p
rivileges before
c
r
e
ating new stockpr
o
p
commit
|
commitdiff
|
tree
2011-02-28
N
aa
m
a Menda
fixing
t
he associate locus functional
i
ty on the stoc
k
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Menda
document
a
t
io
n
for j
a
vascript form object
commit
|
commitdiff
|
tree
2011-02-28
Naam
a
Menda
loa
d
ing
script
f
or so
l
cap snp genotypes
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
adde
d
link to st
o
ck owners
commit
|
commitdiff
|
tree
2011-02-28
N
aama Men
d
a
adde
d
fu
n
ction for as
s
ocia
t
ing loci
commit
|
commitdiff
|
tree
2011-02-28
N
a
a
m
a
Menda
added
form for browsi
n
g l
o
c
i
to be associat
e
d with
.
.
.
commit
|
commitdiff
|
tree
2011-02-28
Naama Menda
remove
d
some p
e
rl code from
a
llele
c
o
mponent
commit
|
commitdiff
|
tree
2011-02-28
Na
a
ma
M
enda
add_publication works now for
s
t
oc
k
s
commit
|
commitdiff
|
tree
2011-02-28
Naa
m
a Me
n
da
db patch f
o
r moving the stock p
u
blication
s
to th
e
right
.
.
.
commit
|
commitdiff
|
tree
next