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clean up redundant code in separation of PCA from GWAS results
2019-02-06
af
p
owe
l
l
cle
a
n up
r
edund
a
nt co
d
e
in s
e
para
t
i
on of PCA
fr
o
m G
W
AS
.
.
.
commit
|
commitdiff
|
tree
2019-01-11
a
f
powell
g
i
v
e
use
r
alert if sol
g
w
a
s button atte
m
pted witho
u
t
.
.
.
commit
|
commitdiff
|
tree
2019-01-11
a
fpowe
l
l
disable histogram button if trait no
t
s
e
le
c
ted and
.
.
.
commit
|
commitdiff
|
tree
2019-01-10
afp
o
well
m
o
difying
the layout
o
n
th
e
p
a
ge
commit
|
commitdiff
|
tree
2019-01-10
afpowell
remove
Select Trait button; move code
under
Select
.
.
.
commit
|
commitdiff
|
tree
2019-01-10
afpowell
removed get_shared_phe
n
otypes su
b
and
commented line
s
.
.
.
commit
|
commitdiff
|
tree
2019-01-10
afpowel
l
vega-lite histogram working for traits
commit
|
commitdiff
|
tree
2019-01-10
afp
o
w
e
l
l
ge
t
ting ve
g
a
trait histogram
started
commit
|
commitdiff
|
tree
2019-01-04
afpowell
se
t
up grabbing data
fo
r
vega histogram
commit
|
commitdiff
|
tree
2018-12-31
afp
o
well
res
e
t trait selector wh
e
n dataset is
c
han
g
ed
commit
|
commitdiff
|
tree
2018-12-28
afp
o
well
s
e
t up for slur
m
commit
|
commitdiff
|
tree
2018-12-21
a
f
powel
l
a
lter mark
e
r number and
r
emove histo
g
ram
commit
|
commitdiff
|
tree
2018-12-14
afpowell
implement marker s
u
bsettin
g
commit
|
commitdiff
|
tree
2018-10-19
af
p
owell
Mer
g
e b
r
anch 'master
'
into topic/gwas_web
commit
|
commitdiff
|
tree
2018-10-18
afpowel
l
ch
a
nge colour of histogram
commit
|
commitdiff
|
tree
2018-10-18
a
f
powell
cha
n
ge text for
c
hec
k
box
commit
|
commitdiff
|
tree
2018-10-17
afpowell
making phenot
y
pe loading upon data
s
e
t sel
e
c
tion
d
ependen
t
.
.
.
commit
|
commitdiff
|
tree
2018-10-08
afpowell
Merge
b
ranch 'master
'
into topic/
g
was_
w
eb
commit
|
commitdiff
|
tree
2018-09-21
afpowell
check
/
f
ix n
e
wli
n
e
s
i
n
phenotype datas
e
t
retr
i
ev
a
l to
.
.
.
commit
|
commitdiff
|
tree
2018-09-12
a
fpowell
Make
s
ubstitu
t
ion to fix fi
l
e pat
h
s
of output
f
igures
commit
|
commitdiff
|
tree
2018-09-12
afpow
e
ll
attempt fix so pmatch
i
n R script doesn't crash
commit
|
commitdiff
|
tree
2018-08-12
afpow
e
ll
Remove hard path in
R sc
r
ipt
commit
|
commitdiff
|
tree
2018-08-10
a
f
powell
f
i
x R script
p
ath
commit
|
commitdiff
|
tree
2018-08-10
afpow
e
l
l
Fix path to R
S
cript
for solgwas
commit
|
commitdiff
|
tree
2018-08-10
a
f
powell
Add dereferenc
i
ng to a
v
oid s
o
rt keys blessed hash excepti
o
n
commit
|
commitdiff
|
tree
2018-08-10
afpowell
Adjusted
R
sc
r
ip
t
use of
p
henotype
input data
to avoid
.
.
.
commit
|
commitdiff
|
tree
2018-08-09
a
fpowel
l
set new logi
n
redirect
commit
|
commitdiff
|
tree
2018-07-23
afpowell
Merge
branch 'ma
s
ter' into
t
o
p
ic/g
w
as_web
commit
|
commitdiff
|
tree
2018-06-29
afpowell
Cosmetic changes
t
o
plots and added he
l
p page
commit
|
commitdiff
|
tree
2018-06-28
afpowe
l
l
A
d
ded
s
electors for
k
inship and
PC cova
r
i
a
tes
commit
|
commitdiff
|
tree
2018-06-28
af
p
owell
fixe
d
us
e
of
figure file names
commit
|
commitdiff
|
tree
2018-06-15
a
f
powell
Merge
p
ull request #
1
946 from solgenomics/topic/vega
.
.
.
commit
|
commitdiff
|
tree
2018-06-01
afpow
e
ll
add t
o
g
gle to in
c
lude locat
i
o
n
in
mo
d
el
commit
|
commitdiff
|
tree
2018-06-01
afpowell
add R script, cl
e
an up alerts
commit
|
commitdiff
|
tree
2018-05-30
afpowell
A
d
d
w
o
rkin
g
mod
a
l to
ajax request
commit
|
commitdiff
|
tree
2018-05-29
afpowell
a
d
just data
s
et
selector box position and displa
y
commit
|
commitdiff
|
tree
2018-05-29
afpo
w
ell
c
l
ea
r
figures and add
new fig
u
res
commit
|
commitdiff
|
tree
2018-05-26
a
f
powell
Up
d
ate PUL
L
_REQUEST_
T
EMPL
A
TE
.
md
commit
|
commitdiff
|
tree
2018-05-26
afpowel
l
U
p
date PU
L
L
_
REQUE
S
T
_
T
E
MPLATE
.
md
commit
|
commitdiff
|
tree
2018-05-25
afpowell
fix trait dropdown selector
op
t
i
o
ns,
also send
selec
t
ion
.
.
.
commit
|
commitdiff
|
tree
2018-05-18
afpowe
l
l
Use stock
i
d (
g
e
r
mplasmDbId
)
fo
r
re
t
rieve
d
genoty
p
es
.
.
.
commit
|
commitdiff
|
tree
2018-05-18
afpowell
A
l
terations to pa
t
hs
to figure
s
commit
|
commitdiff
|
tree
2018-05-16
afpowe
l
l
Merge pul
l
request
#
1877 fr
o
m
solgenomics
/
t
o
pic
/
comm
o
n_fo
o
t
e
.
.
.
commit
|
commitdiff
|
tree
2018-05-16
afp
o
well
Update PULL_
R
E
QUEST_T
E
MPLATE
.
m
d
commit
|
commitdiff
|
tree
2018-05-16
afpowe
l
l
Updat
e
PULL_
R
EQUEST_TEMPLATE
.
md
commit
|
commitdiff
|
tree
2018-05-16
a
f
p
owell
fix format of m
a
rker
line
i
n retrieved genotypes fi
l
e
commit
|
commitdiff
|
tree
2018-05-15
a
fpowell
mod retrieve genot
y
pes to include
mark
e
r names as
first row
commit
|
commitdiff
|
tree
2018-05-13
afpowell
pass geno and phen
o
files as arguments to R script
commit
|
commitdiff
|
tree
2018-05-11
afpowell
l
o
ading gen
o
type d
a
t
a and
showing P
C
A
commit
|
commitdiff
|
tree
2018-05-02
afpowell
Run te
s
t R script a
n
d attem
p
ti
n
g t
o
d
isplay output
commit
|
commitdiff
|
tree
2018-03-14
afpowell
M
e
rge pull request
#
1708 from solgenomics/
t
opic
/
add_m
i
c
r
oct
commit
|
commitdiff
|
tree
2018-03-07
afpowe
l
l
Merge p
u
ll r
e
ques
t
#1688 from
s
olgenomics/to
p
ic/update_peppe
.
.
.
commit
|
commitdiff
|
tree