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Add some more align_viewer tests, which depend on the muscle binary existing
2010-06-09
Duke Le
t
o
Add some more align
_
viewe
r
tes
t
s,
whic
h
depend on the
.
.
.
commit
|
commitdiff
|
tree
2010-06-09
D
u
ke
L
eto
Replace anothe
r
instance of open with slurp in align_viewe
r
commit
|
commitdiff
|
tree
2010-06-09
D
u
k
e Leto
Add
a
test for the
b
a
sic alignmen
t
ex
a
mple
commit
|
commitdiff
|
tree
2010-06-09
Duke Let
o
Use Fi
l
e::S
l
ur
p
instead of open()
commit
|
commitdiff
|
tree
2010-06-08
Duke
L
eto
Fix a typo in the POD o
f
t/tools
/
align_vi
e
wer
.
t
commit
|
commitdiff
|
tree
2010-06-08
Duke
Leto
More tests for al
i
g
n
_v
i
e
wer and add Test::Class as
.
.
.
commit
|
commitdiff
|
tree
2010-06-08
Duke L
e
to
Add t
e
s
t
s for v
a
lid input
t
o align_v
i
ewer
commit
|
commitdiff
|
tree
2010-06-08
Duke Leto
Refactor ge
t
_arguments call
commit
|
commitdiff
|
tree
2010-06-08
Duke Let
o
Ad
d
basic tests
for align_viewer
commit
|
commitdiff
|
tree
2010-06-08
Duke Le
t
o
Fix
i
n
cor
r
e
ct death message in t/bulk
.
t
commit
|
commitdiff
|
tree
2010-06-08
Duk
e
Le
t
o
Re
a
lign a
n
d clea
n
up validate_all
.
t
commit
|
commitdiff
|
tree
2010-06-08
Duke Leto
Fixed lin
k
to japan
.
pl, c
l
oses #998
commit
|
commitdiff
|
tree
2010-05-27
Duke Let
o
O
nl
y
load CXG
N
.
Effects on
c
e on the
u
n
igene_build
detail
.
.
.
commit
|
commitdiff
|
tree
2010-05-27
Duke
L
eto
O
n
ly load JS libs once in unigene_detail
.
mas
commit
|
commitdiff
|
tree
2010-05-24
Duke Leto
Remove some more us
e
les
s
debug o
u
tput, bu
t
refrain
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
Duke Leto
Clean up
some
o
f
t
he
B
u
l
k modules
commit
|
commitdiff
|
tree
2010-05-21
D
uke Leto
I
m
p
r
o
ve b
u
lk
.
t a
n
d add a test for unigene_co
n
vert
commit
|
commitdiff
|
tree
2010-05-18
Duke Leto
Get rid
o
f
dead code
a
nd
remo
v
e print
t
o S
T
DERR
commit
|
commitdiff
|
tree
2010-05-18
Duke
L
e
t
o
Revert 6
a
9
a055cc,
w
hich
a
c
c
iden
t
a
lly undid a
b
unch
.
.
.
commit
|
commitdiff
|
tree
2010-05-18
Duke Let
o
Fi
x
b
ulk
.
t
commit
|
commitdiff
|
tree
2010-05-14
Du
k
e Leto
Add v
i
m swap files to
.
gi
t
ignore
commit
|
commitdiff
|
tree