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2019-11-13	afpowell	add informative error message to ajax	commit \| commitdiff \| tree
2019-11-13	afpowell	change to add timeout to solgwas ajax	commit \| commitdiff \| tree
2019-11-13	afpowell	remove stderr printing in Dataset File	commit \| commitdiff \| tree
2019-11-13	afpowell	set up initial testing of Genotype Search	commit \| commitdiff \| tree
2019-11-11	afpowell	retrieve germplasmDBId and enable interator retriever...	commit \| commitdiff \| tree
2019-10-31	afpowell	set up iterator and get next function	commit \| commitdiff \| tree
2019-10-24	afpowell	updating genotype search functions for iterator	commit \| commitdiff \| tree
2019-10-21	afpowell	add submit host to enable cluster job	commit \| commitdiff \| tree
2019-10-10	afpowell	Set up first version of line-by-line genotype dataset...	commit \| commitdiff \| tree
2019-02-13	afpowell	mason/tools/solgwas/index.mas	commit \| commitdiff \| tree
2019-02-13	afpowell	edit to solgwas help page	commit \| commitdiff \| tree
2019-02-12	afpowell	Adjust histogram back to non-cluster form, adjust PCA...	commit \| commitdiff \| tree
2019-02-11	afpowell	copy image files back to temp dir for diplsay	commit \| commitdiff \| tree
2019-02-11	afpowell	initial setup of temp files on export prod	commit \| commitdiff \| tree
2019-02-11	afpowell	Merge branch 'master' into topic/solgwas_speedup	commit \| commitdiff \| tree
2019-02-08	afpowell	wait for cluster job to finish	commit \| commitdiff \| tree
2019-02-06	afpowell	Update commented old Rscript commands	commit \| commitdiff \| tree
2019-02-06	afpowell	clean up redundant code in separation of PCA from GWAS...	commit \| commitdiff \| tree
2019-01-11	afpowell	give user alert if solgwas button attempted without...	commit \| commitdiff \| tree
2019-01-11	afpowell	disable histogram button if trait not selected and...	commit \| commitdiff \| tree
2019-01-10	afpowell	modifying the layout on the page	commit \| commitdiff \| tree
2019-01-10	afpowell	remove Select Trait button; move code under Select...	commit \| commitdiff \| tree
2019-01-10	afpowell	removed get_shared_phenotypes sub and commented lines...	commit \| commitdiff \| tree
2019-01-10	afpowell	vega-lite histogram working for traits	commit \| commitdiff \| tree
2019-01-10	afpowell	getting vega trait histogram started	commit \| commitdiff \| tree
2019-01-04	afpowell	set up grabbing data for vega histogram	commit \| commitdiff \| tree
2018-12-31	afpowell	reset trait selector when dataset is changed	commit \| commitdiff \| tree
2018-12-28	afpowell	set up for slurm	commit \| commitdiff \| tree
2018-12-21	afpowell	alter marker number and remove histogram	commit \| commitdiff \| tree
2018-12-14	afpowell	implement marker subsetting	commit \| commitdiff \| tree
2018-10-19	afpowell	Merge branch 'master' into topic/gwas_web	commit \| commitdiff \| tree
2018-10-18	afpowell	change colour of histogram	commit \| commitdiff \| tree
2018-10-18	afpowell	change text for checkbox	commit \| commitdiff \| tree
2018-10-17	afpowell	making phenotype loading upon dataset selection dependent...	commit \| commitdiff \| tree
2018-10-12	Lukas Mueller	fix undefined value warnings in File.pm	commit \| commitdiff \| tree
2018-10-08	afpowell	Merge branch 'master' into topic/gwas_web	commit \| commitdiff \| tree
2018-09-21	afpowell	check/fix newlines in phenotype dataset retrieval to...	commit \| commitdiff \| tree
2018-09-12	afpowell	Make substitution to fix file paths of output figures	commit \| commitdiff \| tree
2018-09-12	afpowell	attempt fix so pmatch in R script doesn't crash	commit \| commitdiff \| tree
2018-08-12	afpowell	Remove hard path in R script	commit \| commitdiff \| tree
2018-08-10	afpowell	fix R script path	commit \| commitdiff \| tree
2018-08-10	afpowell	Fix path to R Script for solgwas	commit \| commitdiff \| tree
2018-08-10	afpowell	Add dereferencing to avoid sort keys blessed hash exception	commit \| commitdiff \| tree
2018-08-10	afpowell	Adjusted R script use of phenotype input data to avoid...	commit \| commitdiff \| tree
2018-08-09	afpowell	set new login redirect	commit \| commitdiff \| tree
2018-07-23	afpowell	Merge branch 'master' into topic/gwas_web	commit \| commitdiff \| tree
2018-06-29	afpowell	Cosmetic changes to plots and added help page	commit \| commitdiff \| tree
2018-06-28	afpowell	Added selectors for kinship and PC covariates	commit \| commitdiff \| tree
2018-06-28	afpowell	fixed use of figure file names	commit \| commitdiff \| tree
2018-06-01	afpowell	add toggle to include location in model	commit \| commitdiff \| tree
2018-06-01	afpowell	add R script, clean up alerts	commit \| commitdiff \| tree
2018-05-30	afpowell	Add working modal to ajax request	commit \| commitdiff \| tree
2018-05-29	afpowell	adjust dataset selector box position and display	commit \| commitdiff \| tree
2018-05-29	afpowell	clear figures and add new figures	commit \| commitdiff \| tree
2018-05-25	afpowell	fix trait dropdown selector options, also send selection...	commit \| commitdiff \| tree
2018-05-18	afpowell	Use stock id (germplasmDbId) for retrieved genotypes...	commit \| commitdiff \| tree
2018-05-18	afpowell	Alterations to paths to figures	commit \| commitdiff \| tree
2018-05-16	afpowell	fix format of marker line in retrieved genotypes file	commit \| commitdiff \| tree
2018-05-15	afpowell	mod retrieve genotypes to include marker names as first row	commit \| commitdiff \| tree
2018-05-13	afpowell	pass geno and pheno files as arguments to R script	commit \| commitdiff \| tree
2018-05-11	afpowell	loading genotype data and showing PCA	commit \| commitdiff \| tree

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